ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXC9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◣ HOXC9: Average

◢ SRX111320: BE(2)-C

◢ SRX111321: BE(2)-C

◢ HOXC9: STRING

DEPP1
NRL
DCAF11
TNFAIP2
FOXJ2
SLC6A2
GPR84
GALNT16
ZNF48
TBC1D10B
MYLPF
MAP3K7CL
CCT8
HOXC6
HOXC5
TCIRG1
NDUFS8
MAMDC2
SCML4
TLE6
TRAF3IP2
DNAL4
DUX4
ING3
GLDN
UBXN10
PLA2G2C
DPP6
PPP5C
NRSN1
RPL24
KIAA0319
FGF8
DRGX
FBXW2
ZNF837
RPS5
HOXC4
IGLON5
SEMA5B
GPR68
ZSCAN31
SF3B6
FAM228B
PIH1D1
NR3C1
ALDH16A1
TOMM40L
APOA2
KATNB1
OLFML2B
PRR13
STRN3
AP4S1
LPIN1
CXCL12
TGFBI
WIZ
SLC17A8
DIABLO
GFRA3
KCNAB2
TLE5
SLC17A3
FKBP1A
RNF183
GNL2
RIMBP2
DDX43
C6
ITGB5
C10orf105
SMYD3
CCN5
MTRNR2L2
MSH3
C9orf92
SYBU
ZNF654
CGGBP1
LRRTM4
SLC25A25
SRGAP2C
SRGAP2B
TMEM183B
PFN2
WDR74
STX5
CMTM4
CBX5
ABCA12
RMDN3
GCHFR
USH2A
ZBTB18
CNTNAP4
CCDC73
TBX15
TLE3
C1orf100
CPO
RAPGEF2
BFSP2
C1orf185
P2RX1
KIF26B
SAMD11
NCK1
TPM1
IGFBP5
ENPP7
TRIO
CHD1
MFSD6
LIMS1
CITED2
LENG9
CDC42EP5
GRWD1
SCOC
SIPA1L2
C9orf62
ZNF761
SLITRK5
HES6
SLC31A1
FKBP15
FAN1
GABRA1
VAV3
C14orf180
RPS7
KCNK16
GDF11
GSX2
ATG9B
ABCB8
HOXC8
RDX
TCF4
KBTBD11
SLC12A3
ZBTB45
SLC27A5
LRRC15
MTRNR2L8
ETV1
CENPF
SULT1C4
PNMA1
CHCHD3
LOC102724770
DGCR6
TAS2R20
EVI5L
AQP6
MAP1LC3C
CYTH3
TSHZ2
IFT57
PHLDB1
TBX3
SMC2
SLC25A26
ANGPTL7
PHF14
MACROD2
CHGA
PARVA
SLC7A14
UBE2D1
OPRM1
ELAVL4
CDH10
GGT1
MECOM
TIGD4
ARFIP1
KL
GGT2
ASCC2
PLEKHS1
ADGRD1
SLC2A8
NPR1
ILF2
RXFP4
KHDC4
MICAL3
ZBTB39
TAC3
ADCYAP1R1
NPTXR
IL19
ZNF488
HAPLN1
TUBB1
PRKD3
ATP5F1E
PRSS56
PIAS4
USP7
FOXN4
ZZZ3
CRYBG1
UGT1A6
CCDC33
ROBO4
HERC3
AMY2A
COX16
TNFRSF19
GPR83
CHI3L1
RSAD2
KDM4B
GPR1
STON2
COMTD1
FAM163B
EXOSC2
RGS5
NTNG1
STAT1
ATF3
NRP2
DNAJB8
ELOA3D
ELOA3C
ELOA3B
ELOA3
PRKAG2
RCAN1
EEF1AKNMT
SKP2
LMBRD2
ITPK1
C3orf52
VSTM2A
GJA5
IQSEC1
OLFM3
NFASC
TRIL
KIF3C
PRKAR2B
OXCT1
MAD2L2
DRAXIN
TCF20
PPP3CA
MAD1L1
KMT2A
EPRS1
SIRT1
FAIM
MRPS14
FBXO30
TFPT
PRPF31
TEDC2
TBC1D24
NTN3
FAM161A
RBKS
LOXL1
BABAM2
PHOX2B
H3C15
H3C14
H2AC19
H2AC18
AGR2
PDZRN3
CATSPER3
CDH18
PDCL
ELMOD2
DERL1
CNTN1
PPM1A
PLA2R1
SOX4
LRRTM3
ABAT
GYS2
TIMM44
TRMT5
SLC38A6
PLEKHA5
GNAQ
CYRIB
NRG1
CHRM3
CD200R1L
KCNH6
GJD2
DISP1
TBX2
SIX1
NTN4
SNX7
MFSD12
CDON
CHD9
LIMA1
MTRNR2L1
ZNF552
SEMA4B
TMEM60
SGIP1
PHTF2
CHST6
SUGP2
ARMC6
SH3GLB2
DAOA
B3GLCT
FRG2C
DCLK3
CYB561
BEAN1
PLD1
ELOA2
SIRT4
USP5
QSER1
IGDCC3
CDCA3
ZNF555
NSD2
TUB
TAOK3
SMAD9
COX7A2L
SPINK5
TMOD1
PSMC1
PACS2
MRPL28
DGKB
BRF1
PRKG1
RARB
DIPK1A
CCNG1
BARD1
ZNF510
DRD2
PHKB
ITFG1
RHBDD1
USP40
DYNLL1
ISL1
NEMP1
NAB2
DIXDC1
ANKH
TBCC
RTN4IP1
BICRAL
VSTM5
MTUS1
GGCT
VPS52
RPS18
MAP1LC3B
FBXO31
B3GALT4
BMERB1
SRP14
HTR4
PLXNA1
RAB39A
INTS4
MGAT4C
PKLR
FDPS
PIK3C2G
MTA1
KCNH2
ZBTB7C
RIC8B
KIF26A
GOLGB1
PAFAH1B2
DLX6
POMC
ARL17B
RNF4
ZFPM2
TOM1
MAPK13
SLC31A2
RAB11B
CEP152
SMARCAD1
PKDCC
RET
PCOLCE2
PBX3
MN1
AMPD2
MPHOSPH8
RARRES1
ASNSD1
ASDURF
LYN
AFF3
RAB28
HOXA7
HOXA6
HOXA5
AOPEP
SLAMF8
GPR85
BAZ1A
TULP3
RPH3A
RHNO1
FOXM1
ZFAND6
SLC8A1
ITSN1
ITM2C
CRYZL1
RNF24
RHO
STK32B
PMVK
KRT80
FAM219A
DNAI1
STARD13
CTBP2
SLC48A1
SLC17A2
RAPGEF3
ZNF667
SCHIP1
PRR25
KCNK15
GNG13
ACVR1
RGS4
ID4
WNK1
IGF2BP3
PLAC1
MAP3K13
EAPP
ASF1B
RP1L1
PTAR1
OAZ2
KNL1
CFAP126
ZNF775
UTS2R
TEX19
SWSAP1
SLC25A41
SLC18A1
KHSRP
ASB8
ICA1
HEBP2
CPA1
ATP2B4
HAND1
MPP4
BAMBI
CARS1
SUCNR1
BEND4
BCL9L
AGFG1
MTIF3
ACTN1
ANKHD1-EIF4EBP3
ANKHD1
RBM25
NCS1
CTRL
APMAP
EFCAB6
MEX3B
ZFHX2
TBC1D4
SLX1B
SLX1A
RTP5
PDCD1
FAM222A
BOLA2-SMG1P6
BOLA2B
BOLA2
DHRS2
EFCAB2
BAHCC1
HOXD4
CALM2
TUBG1
SLC11A1
RUFY3
RETREG3
PPP2R5E
GPR137B
ZNF106
SNAP23
HEXIM2
NRTN
SPATA24
PSMB2
MIR1-1HG
FBXW7
TCERG1
RMDN2
PIK3R4
KIF2A
AMMECR1L
ADAMTS17
H3-3B
GALK1
RARA
CDK17
CACNA2D4
ARPC1B
ZNF350
CDIPT
YWHAB
DCP1B
SORL1
PWWP3A
UPP1
SH2D3C
ARID5A
TMEM126B
LINGO1
DLG2
ADGRE5
TM2D1
PATJ
FAM107B
CGAS
ACTR3
RNF145
MTHFSD
DPH2
B4GALT2
ATP6V0B
CFAP20
RASD2
UHMK1
MDM4
ADAMTS19
NGDN
CYP8B1
ZNF132
RABGAP1L
VPS26B
NOMO1
NCAPD3
C8orf48
HOXD8
SUPT7L
SLC4A1AP
MAP2
GRIK2
FRMD3
SELENBP1
HGF
TPGS1
GPR107
COL21A1
SCIN
FOCAD
STK40
SLC35B4
RBM15
MFSD8
C3orf38
ABHD18
TOX
PODN
VEPH1
PTGES2
GCSAM
ESRRB
CLASP2
TRPM3
RAB14
GSN
DBH
CTDSP1
YWHAZ
RACGAP1
MOV10L1
MLC1
TIGD6
HMGXB3
TAPT1
SARS1
ZNF608
ULBP3
KCNJ3
CABCOCO1
PRPF4
CDC26
TTC12
TIAM1
PSENEN
PROSER3
LIN37
IGFLR1
HSPB6
TMEM79
SMG5
KIAA1549
GPR155
CUBN
APH1B
ALG10B
RAB31
GBA
LRRC18
AP3S1
PIGM
FAM160A1
ZNF285
USP25
NUF2
MBOAT4
GP5
FREM1
FGF1
DCTN6
ASXL2
RBM12
IGFBP3
CPNE1
TECTA
CLMN
UBL4B
SYNPO
RPP25
NT5C2
FOXJ3
CPA3
SCARB2
PC
FAM47E
ABT1
ZNHIT3
NFYC
PSMD6
ZC3H3
TBC1D2
NME7
CAMK4
BLZF1
MARCKS
CIB4
ZSWIM4
RASSF8
LSMEM1
KRT19
SORT1
SLC39A13
MTA3
MFAP3L
KIF18B
KCNG3
FUT6
FAR2
CREBL2
FCF1
BMPR1B
AREL1
AHCYL1
MRPL27
FOXP1
EME1
CYP51A1
CAND1
TNS1
TMEM141
XAB2
STXBP2
RNF34
PET100
PCP2
NUMB
FGGY
COG3
RSBN1
ERCC6L2
VPS51
TMEM262
RASGRP1
KREMEN1
EMP3
TDRD9
ATP5MPL
PTPDC1
MC4R
KCNAB1
FAM98A
THRAP3
IMPDH1
ZFR
MTMR10
FLYWCH2
CHD1L
ANTXR2
AGTR1
TUBB2B
POGZ
OSBPL1A
GRAP2
BAX
PABPN1
DPP9
CASQ1
SHC1
GSKIP
FLAD1
CKS1B
TMEM236
PDE3A
KRBA1
KLHDC8A
FILIP1
TBC1D31
NEDD4L
ISLR2
ANO6
ZBTB40
PRUNE2
HPS3
EHD4
SMIM3
NEK2
CRYGB
AKAP11
CLDN4
ZBTB20
SYT15
PGP
LOC102724488
E4F1
SRPK2
SRGAP2
SLC36A4
RXFP2
DACH1
WNT5A
TPCN1
TNS3
SFR1
PDE4D
CCDC89
WASHC3
TJP2
SEC22B
LMO7
CREB5
CEP85L
AMOT
TRIM56
HECW2
CAPN10
BLOC1S5
SH2B2
NRXN2
CERKL
BCAR3
MTNR1B
HES1
ARID5B
ZMYND8
TLX3
NOMO3
ABCC6
SKA2
PRR11
NECAP1
AGL
SLC26A7
PDLIM4
SLX4IP
RERE
PXYLP1
NUP93
NDUFB5
MRPL47
MKKS
FGF14
B3GNT3
TRAF3IP3
STK39
RSPRY1
PSME3IP1
KAT6B
ARHGEF3
TRUB2
PTBP2
PRRT4
PLCXD3
FKBP9
COQ4
ASB6
MIA3
METTL7A
INPP4B
EEF2K
CELF1
ZNF444
TFB2M
TFAP2A
TAS2R1
NUDT17
CYP19A1
CNST
WAC
UBE2V1
SURF4
SSRP1
PAQR5
P2RX3
DYNLT1
CDH15
BCAS2
ARL15
TOMM40
STYX
CHST12
MAP3K3
IGFBP7
BIVM-ERCC5
ARL4D
TUBA1C
TRIOBP
SLC44A3
MCCC1
LSM5
IRF2BPL
CYTH1
AVL9
RFT1
GNG12
DAB2IP
RPL27
METTL25
IFI35
CCDC59
WDR89
KIAA0232
SVBP
PTPRE
PGM2
LARP1
ERMAP
CFAP69
RHOBTB1
PCARE
ICE1
HEY1
FAM102B
TNRC18
TMEM178A
SLIRP
SESN1
LOC283710
LOC100129484
CEP57L1
ALKBH1
UBA5
TOM1L1
SLC41A2
RIMS2
PCSK6
GLIS3
ACAD11
ZFYVE26
SNX6
RAD51B
PPFIBP1
MYT1
GABRR1
ZNF566
PRLHR
PCDH15
MTMR2
TMCO5A
SH3BGRL2
PTPRK
MYL10
USF1
TSTD1
DACT2
CSDE1
COPS7A
HERPUD1
BZW2
BICD1
B3GNT4
PRSS41
NR0B2
GPATCH3
EML4
WBP11
SMCO3
MRPL23
MLLT3
C12orf60
BAZ2A
ATP5F1B
VLDLR
STRA6
RPS26
PLEKHM3
MUSK
INAFM2
CUX2
BLOC1S6
TMEM245
TMBIM6
LCN9
HSPB1
HAND2
GNA12
FUT8
GXYLT2
GPR19
GOLGA6D
COL5A2
ZNF749
LRCH1
HS3ST5
HAGH
FOXN3
FAHD1
CEP41
ZNRD1
ZNF417
PPP1R11
MMS22L
H3Y2
CPN2
ABTB2
THEMIS
STUM
PAXBP1
C16orf46
ALG10
RPS6KA2
TENT2
MRTFA
MAFA
COX7C
ZNF317
THUMPD2
SRRD
OSBP2
MAP2K4
INTS5
HPS4
GANAB
B3GALT2
SULF2
ST6GAL1
SLC22A8
RPRD2
PTBP1
PPP1R3C
ZNF705A
OXER1
SPTAN1
SMAD1
MARVELD2
WFIKKN1
UTP25
H2BC11
H2AC11
EYS
TUFM
SH2B1
OR2C1
MTRNR2L4
DYRK1B
TGFB2
SEL1L
APOLD1
SEPTIN11
PMEPA1
FRMD6
ZNF331
ZFPM1