ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC4 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◣ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MAMDC2
MTRNR2L2
MSH3
KIF5C
WDR74
STX5
MTRNR2L1
MTRNR2L8
DUX4
SPATC1L
SNX16
RGPD2
LOC102724770
DGCR6
HDAC9
FRG2C
ADAMTSL1
TXNDC5
SP2
CABCOCO1
MTRNR2L9
FRMPD4
TNFRSF19
COL23A1
EAPP
ARID5B
TIPARP
FRG2
KATNB1
MUC3A
H4C15
H4C14
H3C15
H3C14
ARHGEF9
FAP
UTP3
H4C3
H1-6
EVI5L
H2AC19
H2AC18
H4C12
H4C11
MTRNR2L10
EMILIN2
CCDC90B
PTPN6
EMCN
DNM2
PCM1
NAV3
ZBTB38
POLR3F
DZANK1
SF3A3
ANKRD28
RBBP5
CLPB
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
LYSMD1
TEPSIN
NDUFAF8
DPH6
SLC25A41
PDE4DIP
KHSRP
SLC25A20
TARS2
DDX23
LY6L
BOD1
FNDC3A
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
YJU2
PAFAH2
SLC8A1
H2BC14
H2AC14
VPS50
SSBP1
PROSER3
LIN37
HSPB6
HEPACAM2
PPP5D1
CALM3
RFX1
UNK
H3-3B
TMEM242
PLA2G4A
H3C4
C5orf38
TMEM115
NPRL2
CYB561D2
CHMP4B
CCDC200
USP5
CDCA3
TOP2A
EPS15
UBE2T
PPP1R12B
INTS1
IARS2
BPNT1
TCEA2
GBA
DDX49
COPE
NAA80
IFRD2
HYAL3
TACO1
RWDD1
CCL3
PSPN
ALKBH7
SYT7
ATP6V1G1
SLC25A25
NAIF1
SP1
EHF
TBL1X
SRCIN1
PRR14
FBRS
PHF12
NUP88
NUDT13
ZAR1
TAF12
FBXL19
H2BC4
H2BC15
H2AC6
H2AC15
THRAP3
INO80C
PARP16
FEM1A
HEATR5B
TP53I3
SF3B6
MAPKAPK5
FAM228B
CSDE1
ARHGAP35
AP2S1
UVRAG
PHRF1
USP22
HNRNPUL1
BRWD1
SMARCD2
ANGPTL2
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
MTOR
GLIPR1L1
CAPS2
COMMD1
CCT4
ARL4D
NDUFS3
MDH1
KBTBD4
FAM180B
TSN
TRAPPC9
PTEN
KLLN
NUF2
IRF2BP2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PLA2G15
RHOT2
RHBDL1
INTS10
MATR3
GALM
UBE2J1
IL32
CIC
TMEM107
LSG1
TSNAXIP1
RANBP10
OR4M1
GTF2I
AURKAIP1
ST3GAL2
PRCC
MYOM2
CBWD2
PMF1-BGLAP
PMF1
PHB
CCNL1
SUCLG1
RPS20
MRPL24
HDGF
ARHGAP17
TJP3
LARS1
FCRL5
SIX1
PHF19
NLK
BANP
TBC1D17
PNKP
CD79A
ARHGEF1
AKT1S1
NEBL
ID3
ARID2
PEX14
DFFA
ARHGEF2
SSR3
RAD52
ERC1
FAM168A
SMPD3
ENPP4
CLIC5
CCDC138
KLHL29
TSSC4
TSC2
NTHL1
RAG2
PRRG2
NOSIP
IFTAP
PPRC1
STAT1
LRRC29
CALR3
C19orf44
TOMM40L
NUDCD1
FBH1
DENND1B
APOA2
TOM1L2
S1PR4
NCLN
DRC3
AK2
TESK2
PAK1IP1
MMACHC
C6orf52
B4GALT3
TRIP10
GPR108
RAB5B
PMEL
KLF2
CDK2
RMDN2
ZFYVE1
UCKL1
TATDN3
SSBP2
PPP1R2
NSL1
GSPT1
BAHCC1
ATP2C1
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
GSDMB
OR4Q3
KLF6
FUT10
SPSB3
SHC1
NUBP2
MRPS34
HNRNPC
FLAD1
EME2
CKS1B
LRCH4
GATB
FBXO24
CCDC110
INVS
ERP44
PRR5L
PES1
COMMD9
RAB11B
MRPS18C
HELQ
VIPAS39
RAP2B
AHSA1
TXNDC11
NDC80
METTL4
C1orf198
ART1
NPIPA1
NGB
GCLC
THNSL2
PEMT
LNPEP
WFIKKN1
RPS3
METTL26
MCRIP2
ZNF17
MDM2
IFNGR2
CCDC146
PIGL
NCOR1
COX16
ATF4
BABAM1
SCT
DRD4
CDHR5
ZNF365
ING4
CARD6
ACTL6A
RUFY3
ZNF417
H4C4
H2BC6
SMAD3
PANK4
HES5
GUCY2D
TRIP4
PCLAF
FAM177B
EIF2AK3
CXCR5
CCL5
CCDC39
BMF
TOM1
MALL
ZNF608
TMEM256
PLSCR3
NLGN2
SPAAR
HRCT1
CYTH3
PRDM15
MDM4
KRR1
ID1
SMCO1
ZPBP2
PIN4
IKZF3
SP5
NLRP3
NCOA7
MNT
AIM2
SRSF11
LRRC40
ZNF48
ZNF286A
UNKL
TBC1D10B
RXFP4
PNKD
OST4
NPR1
MYLPF
KHK
KHDC4
ILF2
IL17A
GPBAR1
EMILIN1
C16orf91
BMP5
AAMP
WT1
STIP1
RASAL2
NUP107
NAT16
HCAR3
CHST12
CCAR2
C8orf58
BUB1B
ZNF268
OSBP
HDAC7
ANP32C
MED27
KMT2C
GPR137
GLDN
EML2
DPP9
DOK3
DDX41
GUF1
NOP16
HIGD2A
CRYBB1
POLG
GSK3A
ERF
RARB
FGG
CRYAA2
CRYAA
ZNF547
XAB2
TRAPPC2B
STXBP2
SLC35B1
RGS8
PET100
PCP2
SKA2
PRR11
FER1L5
TJP1
MAPK11
COG3
NDUFS7
VPS51
UBE2H
TTI2
TMEM262
INTS9
HMBOX1
DRAP1
DAGLB
C11orf68
TULP2
NUCB1
LOC102723996
ICOSLG
DYNC1I2
COMMD2
USP3
SH3RF2
MTRF1
MNX1
ZNF639
TFPT
TBL1XR1
PRPF31
CCM2
CBWD5
TUBG1
TMEM70
RETREG3
MRPS23
HSD11B1
ELOVL1
ELOC
CDYL
CDC20
BDH1
ZFPL1
USP30
PSMD4
CNIH4
CDCA5
CBWD6
SLC2A4RG
MED23
LIME1
ZNF513
SNX17
SCAF1
RRAS
RCAN1
NOC4L
EIF2B4
DDX51
WHAMM
RPS7
RABL2A
KIAA0895L
FSD2
EXOC3L1
ELMO3
E2F4
VARS2
TRIM48
RANBP2
GTF2H4
FMO4
ZNF211
TP63
BBX
ZNF687
SYMPK
RPL32
PNPLA6
GUCY1A1
FOXK1
FOXA3
FAAP24
CYCS
CEP89
SERPINB5
MRI1
LEFTY2
CMSS1
C19orf53
TM4SF18
TINF2
SLC39A1
NEDD8-MDP1
NEDD8
HOOK1
GMPR2
CRTC2
CREB3L4
AQR
ZCCHC4
RAD51AP2
C2orf42
ZNF165
TPST1
SNAP25
RAD51AP1
OR1F12
C16orf72
C12orf4
WBP1L
WAPL
UBQLN4
SELENOH
LAMTOR2
TBP
STAM
SSBP3
PSMB1
PHB2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FETUB
CBWD1
TMTC3
INSR
CEP290
CBWD3
AMPD3
ZSWIM3
WFIKKN2
SATB1
KDSR
KBTBD6
FCF1
CSNK1G3
COX7C
CCR2
AREL1
ACOT8
ZBTB41
TIMM21
STK25
KIF2C
H4C5
H2BC7
H2AC7
FBXO15
EMC4
CRB1
ABT1
SPTLC3
KIF16B
TIMM22
RAB40B
NUP205
METTL3
LRRC14B
FN3KRP
PRPF18
ATG4C
TMEM109
TBL3
SLC33A1
RPS2
RNF151
PRPF19
POLD1
NR1H2
NOXO1
CCDC77
ZNF628
ZNF337
VMO1
STAP2
PSMB6
NDUFAF5
NAT14
MPND
GLTPD2
ESF1
DPEP3
DPEP2
DMAC1
CAND1
TNFRSF12A
THOC6
LUC7L2
HCFC1R1
GALK2
FMC1-LUC7L2
FMC1
COPS2
CLDN6
STOML2
PIGO
MFAP3L
HMX2
FAM214B
ERVMER34-1
EPYC
COPZ1
CCL3L3
BUB3
ZNF451
ZNF225
ZCCHC8
WDR46
TYK2
TNK2
SMG8
SEC11C
RGL2
RBM28
PFDN6
MRPL30
MITD1
ZNF609
TLR5
TCERG1
RPS6KB2
RPL36
PTPRCAP
OLFML2A
NR6A1
MICOS13
HSD11B1L
CCL3L1
ZMYND8
SCGB1C2
SCGB1C1
RGS3
RAP2A
ODF3
NFKBIL1
MYCBP2
MRPL53
MRPL28
MOGS
FCGR3A
EPRS1
ATP6V1G2
ARL4C
TXK
OAZ3
DHX16
CLEC7A
ZC3H12A
TBX19
SHPK
NPIPB5
NDUFB5
MRPL47
GPR84
CTNS
CHD6
TOR1AIP2
TOR1AIP1
SPHK2
SMARCAL1
SLC35E2B
RPL18
PSENEN
PNISR
NFIB
MEIS1
KRT19
KRT15
IGFLR1
HSBP1
GTF3C3
GSTO2
GORAB
FAM83E
DENND3
BIN2
ZSWIM1
UNC93B1
SPATA25
RPL35A
PPP6R1
IQCG
HAX1
ECT2
CRYBA4
ANAPC5
ALDH3B1
ZFYVE19
VWA5A
PSMD11
OXCT2
MAPKAPK2
KLHL20
HEMK1
DNAJC17
C3orf18
ZNF585B
ZNF383
ZMYND10
PLCD3
DMAP1
BAZ2A
ATP5MG
ATP5F1B
ARNTL
ACBD4
ZSCAN22
TDRKH
OR8D2
OR4N2
LTA4H
AP3S2
UBAC1
SMARCA4
RPL14
PPCDC
IFIT1
ACTA1
MGP
ZMAT2
VRK1
TSC1
SUFU
PSAP
MTFR2
HARS2
HARS1
GOSR2
GFI1B
ACTR1A
ZNF140
TRDMT1
TOMM40
MACIR
CCT8
TUT1
SCAMP4
PPP1R12C
MYNN
MTA2
KRT39
F11R
EMX1
CTU1
CLPTM1L
ADAT3
ACTRT3
ZNF668
ZNF646
UFD1
SH3GL1
PSMC5
P2RY10
OCSTAMP
FTSJ3
DAPK3
CHAF1A
CDC45
WNK4
VPS25
UBR2
RRP1
POLDIP3
NSMCE3
JRK
FAM207A
CSTB
ARID3B
TMEM94
TFB2M
STT3A
IFT27
CYP2R1
CNST
CCDC61
BCL2L1
THAP11
LPIN1
KIF22
ITGB1BP1
CPSF3
TRIM7
SEL1L
RPL27A
HMOX1
ZBTB5
SNCA
FAM83B
CCDC174
ZNF718
ZNF595
ZMPSTE24
STBD1
SLX4IP
PGP
MLST8
MKKS
LCOR
FAM184A
E4F1
BRICD5
TTC21A
SYNE4
RAB11A
NDUFAF1
LOC101927572
GTF2H2C_2
GTF2H2C
GORASP1
FBXO38
ALKBH6
WIPF1
UBE2I
RSF1
PTPRH
POLR2J3
PEX3
FARSB
DBP
AHCYL2
ADAT2
AAMDC
ZNF444
UFSP2
STK17B
SIRT2
NFKBIB
LYZL2
GGCT
CDK5RAP2
C4orf47
UTS2R
TRNAU1AP
TP53TG5
SYS1
SRI
KCTD5
KCNN3
KAT7
DNAJC14
CCDC167
TAS2R38
NAA35
MRPS7
MIF4GD
MAP3K13
HUNK
GSR
GGA3
ATP5MC2
VCPIP1
TXNDC2
TTC39C
PTDSS2
OSBPL2
FMN1
C8orf44-SGK3
C1orf159
ANO9
ADRM1
SNAP47
SACM1L
JMJD4
FRYL
FDXR
DDI2
CRADD
CDC23
ZBTB32
TNFRSF17
TIMMDC1
NPIPB2
NBEAL2
KIFBP
KDELR1
KCNH1
GRIN2D
FAM187A
EFTUD2
DDX1
CCNC
CCDC12
CCDC103
ZNF696
TIFA
SMARCE1
SEC13
NMT1
ISOC2
GOLPH3L
FMO1
DCAKD
BCL3
SUGP1
RPS27
RAB13
PHC3
NUCKS1
MAU2
IDH2
HSD17B4
HEXIM2
FASTKD1
TRAPPC3
TMEM60
PHTF2
PCDH1
NCBP2AS2
NCBP2
MORC3
MAP7D1
HEXA
HARBI1
G3BP1
DLGAP2
DCP1A
CLN3
ATG13
APOBR
AP1G1
ZNF773
ZNF691
TLE3
TLDC2
TAF3
KRT23
ZNF548
RHBDF2
AP2M1
RGS14
POM121
LMAN2
INTS4
GATD3B
GATD3A
CHD9
ZNF519
TRAPPC6A
RPL27
PPP1R37
MRPS17
MKNK2
IFI35