ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CPSF3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◣ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

GH1
CSHL1
RABL2B
ZNF335
RABL2A
TSN
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
MAPKAPK5
DUX4
MAMDC2
SRD5A1
NSUN2
DYNC1LI2
ICE1
NUP85
NVL
CACTIN
C19orf48
VDAC2
REXO1
PSMD12
POLR3F
DZANK1
OAZ3
MRPS7
MIF4GD
GGA3
RWDD1
IPO13
S1PR4
NCLN
NME6
CAPRIN1
VPS52
RPS18
B3GALT4
HSPA9
FRG2C
UBE2I
ZC3H10
RPL41
ESYT1
TAOK3
SUDS3
GOSR2
POLR2E
GPX4
SLC35B1
SUCLG1
FAM187A
EFTUD2
CCDC103
FARS2
DCTN1
VTI1B
ZNF576
IRGQ
MRPS5
UPF2
ZWILCH
SNAPC5
RPL4
NNAT
BLCAP
VEZF1
PSMG2
CEP76
H2AZ1
DNAJB14
EXOSC5
BCKDHA
COX20
CDC73
ACTR10
VARS1
RBBP5
COX7A2L
PSMD1
VPS28
SEC61B
COMMD1
CCT4
SCRIB
SART3
ISCU
STAM
PHF23
GABARAP
DVL2
TSNAX
SKP1
PI4KB
RABGGTB
HADHB
HADHA
ATP6V0C
AMDHD2
C6orf226
POLG2
DDX5
RRP36
MEA1
USP1
EDC4
PES1
SUMF2
STAM2
RPL17-C18orf32
RPL17
C18orf32
POLR2J3
PDAP1
BUD31
COL23A1
RPL26
KRBA2
EPN1
NDUFA4
FARSB
TLCD1
RPL23A
RAB34
NEK8
ATP5F1E
ZRANB2
SYNRG
CIRBP
TAF9
RAD17
AK6
SELENOF
HS2ST1
H2BC5
H1-4
H4C12
H4C11
MYC
SFI1
EIF4ENIF1
ATP5MG
SUPV3L1
H3C3
H1-2
IER3
FLOT1
NUP205
ZNF34
RPL8
NRAS
FAM174C
EIF2S3
SECISBP2
CKS2
RPL21
PAK1IP1
C6orf52
PTGES2
H2BC21
H2AC21
H2AC20
RPLP0
GCN1
RPS27A
CLHC1
PNO1
PIN4
PDHX
APIP
H2BC15
H2AC15
HDGF
TM9SF1
IPO4
H2BC14
H2AC14
RPS11
CTDSP1
ZBTB37
PRRT2
MAZ
MPDU1
LOC100996842
EIF4A1
CD68
EFNA2
TSSK4
MRPL2
KLC4
CUL7
WDR37
IDI1
AXDND1
INPP5E
H4C3
H1-6
RHBDL1
MTRNR2L1
GADD45GIP1
RIT1
AKAP8
H2BC4
H2AC6
NFKBIL1
ATP6V1G2
UBE2M
CHMP2A
MRPL24
FRG2
ANAPC7
AVPI1
GOLGA5
FAM131A
KMT2A
C6orf47
BAG6
APOM
HSPA1B
WDR24
STUB1
JMJD8
MRPS16
DNAJC9
C17orf49
BCL6B
VPS9D1
RXYLT1
MRTO4
EMC1
NECAB3
ACTL10
TRIM65
MRPL38
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PAGR1
DPH7
PCBP1
NRIP1
RPS23
ATP6AP1L
ALLC
TTC8
SRSF11
TM4SF1
TMED1
MVP
THAP9
SEC31A
RPL13A
RCOR3
YJU2
ADK
SMC2
DPH6
NFE2
CBX5
ZNF581
ZNF580
CCDC106
GPAA1
EXOSC4
EEF1A1
PCBD2
H3-3A
OR6B2
NDUFA10
MMP24OS
MMP24-AS1-EDEM2
EIF6
PEAK3
OAZ1
SYCE2
EIF4A2
H4C2
H3C2
H2AC4
MTRNR2L8
RPL35A
LMLN
IQCG
BICRA
RPL27A
RPS5
FAM104A
C17orf80
TMEM132A
CHD2
MRM1
DHRS11
RABL6
CCDC183
GLRX2
H4C9
SHC1
PYGO2
PBXIP1
LOC101928120
TIMM13
ECI1
H3C13
H2BC18
GET4
PIP4K2B
NAT10
H4C1
DDIT4
MRI1
C19orf53
H2BC11
H2AC11
PPP1R10
MRPS18B
ATAT1
PACSIN3
ARFGAP2
WDR74
RAD23A
CALR
MAT2A
RBKS
BABAM2
SLC25A10
MRPL12
ENAH
TBK1
PROCA1
SLC3A2
MED1
CDK12
AP3M1
SIRT7
PCYT2
MAFG
EXOSC6
RPL7
RDH10
RPN1
NUDT1
MRM2
MAD1L1
SGK1
ID3
NAA10
ARL4D
ARHGAP4
HNRNPU
TMPPE
NANOS1
GLB1
PTMA
ACP4
PROSER1
NHLRC3
ASB13
SNAP47
JMJD4
TARBP2
MAP3K12
DENR
TMEM230
PCNA
MAN2C1
IRF2BP2
RPS12
MAPK8IP3
ABTB1
NUDT4B
NUDT4
SYNGAP1
PHF1
CUTA
DONSON
CENPVL3
STX5
FADD
DAPK3
SCAMP3
FAM189B
NDST2
GGA2
PTPN6
C12orf57
ATN1
ANKLE2
PRDM10
OTUD7B
GTF3C4
DDX31
MEMO1
SH2D3C
CDK9
ZNF513
BAZ2A
MUC1
PRKAG1
ULK3
DPY19L4
SF3B3
COG4
TARS3
ZNF837
EIF2D
DENND4B
LRRC37A3
DRAP1
C11orf68
TBCK
MRPL40
HIRA
CCDC138
AIMP1
MSH4
MORC3
ZBTB26
RABGAP1
RPL22L1
BCAP29
KIF27
H3C1
H1-1
ZNF341
PPARA
CYB561D1
ATXN7L2
TAF10
RRP8
ILK
TPP1
PRELID3B
CMTR1
CISD3
XPNPEP3
ST13
DNAJB7
USP21
UFC1
PPOX
DYRK1B
PFDN5
MYG1
MAML1
GRAMD2A
RHOT2
POLR2C
PAF1
MED29
RPS2
RPL3L
RNF151
NDUFB10
CCDC200
WDR90
MCRIP2
NDUFAF3
DALRD3
ADNP
ZCWPW1
PPP1R35
MEPCE
CNPY2
CTNNB1
C5orf24
EGLN1
DGKZ
SPATC1L
HYI
C7orf26
MTRNR2L2
MSH3
PNMA1
PACS1
KLF12
CLK3
ZNF398
NAXE
GPATCH4
CCDC34
ID2
AGO3
MORF4L1
PPFIA4
TBC1D13
GPS2
EIF5A
RPL3
ADARB1
SMIM22
ROGDI
PPP3CB
TOM1
SNX17
EIF2B4
ZNF653
TUBB
MDC1
RNF166
MOV10
CTU2
LAMP1
ALKBH5
H4C5
H3C4
H2BC7
H2AC7
TFAP2A
POMZP3
MRPS34
EME2
H2BC12
H2AC12
EAPP
SURF6
FTH1
BTNL9
ATXN2
NFAT5
LRRC24
C8orf82
UCKL1
PABPN1
STRIP1
GTF2IRD2B
GTF2IRD2
CXorf38
SRF
ABHD17A
ZNF76
BRWD1
RCC1
POLDIP3
UPF3A
FUT11
CHCHD1
NME3
SETD1A
RECQL4
ORAI3
LRRC14
TUBGCP6
RANBP6
KIAA2026
HDAC10
NDUFS3
KBTBD4
FAM180B
TRAP1
SELENOH
IMPDH2
TXNRD2
COMT
H4C8
RUFY2
RNF225
GBA
DESI2
PCDH9
TMED9
PRKRIP1
HMCES
FLOT2
DHRS13
B4GALT7
ZMIZ2
RAB4A
ATP5F1B
ZNF862
ARF3
FAM118A
SPHK2
SPACA4
RPL18
FAM83E
RUVBL1
NOXA1
EXD3
EEFSEC
PIP4P1
OSGEP
APEX1
ZNF865
ZNF585B
ZNF524
ZNF383
FIZ1
RACK1
PRSS27
PDE4DIP
IBA57
KMT5B
TSPAN10
NPLOC4
ZNF207
C17orf75
SLC39A13
TXLNA
HMGN2
RCE1
FBF1
ST3GAL3
MTG2
RPS29
LRR1
TRABD
ROM1
EML3
B3GAT3
ZGLP1
FDX2
CELF1
RPL6
RHOB
SMYD2
NOLC1
RICTOR
GPX1
COASY
BAG2
TMEM223
TMEM179B
POGZ
MTHFS
MLX
SNAPC4
FNBP1
GORAB
PPP1CC
AKT3
PCBP4
BNIP3
ABHD14B
ABHD14A-ACY1
ABHD14A
SLC25A42
NDUFS7
CHAF1B
TTYH2
RPL38
NOXO1
PGP
ASXL1
FLYWCH1
KAT6A
STMP1
SH3BGRL3
HIPK1
NPFF
CLCN5
CUL9
PURA
H4C4
TMEM79
SMG5
FBXL3
RPL13
VARS2
TRIP6
SRRT
GTF2H4
ZFAND6
PRDX2
LMBR1
JUNB
HDHD5
TRMU
PCBP2
RRM2
TOB1
GDI1
FAM50A
ATP6AP1
CTNNAL1
SSX2IP
NKIRAS1
MTF2
TEX38
MKRN2OS
MKRN2
ATPAF1
XRN1
TMEM250
HNRNPF
GPSM1
DNAJC21
CDH24
CARD9
VPS4A
USP39
TMEM150A
RNF181
C2orf68
UFSP1
SLC39A4
RASA4B
CPSF1
COX18
ACHE
KDM3B
DIDO1
SAMD1
C19orf67
SNX16
ACBD6
HMGN1
TTC33
NCBP3
CHD1L
NPM3
FGF8
FBXO4
TMEM267
DSTYK
CCDC88A
SLC39A7
RXRB
RING1
LUC7L2
HSD17B8
TSEN54
LLGL2
FOXD3
CASKIN2
NOTCH2
NAPRT
MROH6
TIGD3
NUB1
SLC39A1
CRTC2
CREB3L4
CPNE7
DNAJC25-GNG10
DNAJC25
SRCAP
NUDT16L1
LOC730183
RAD9A
PPP1CA
GOLM2
TP53BP2
CSRNP2
EIF3L
ANKRD54
PHF2
ABL2
SPCS1
GLT8D1
ZBTB45
RAD54L
GOLGA1
DDX59
PDCD6
NCOA7
TYMP
SCO2
ODF3B
RFX1
PYCR2
SLC27A5
FAM207A
BHLHE40
KANSL1
AGK
KMT2C
TAOK2
B3GALNT2
DERA
ACBD3
SRSF4
SPSB3
NDUFB2
NBPF1
GTPBP3
ANO8
CD320
SCAP
PWP2
LOC102724159
TRAPPC8
THEM4
PDCD2
HAGHL
CCDC78
ANTKMT
SETD6
INTS5
GANAB
CD79A
SOD2
GPN2
NXF1
CYP2W1
COX19
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
NME4
DECR2
TM2D3
ATF3
UBA2
RABIF
PARP1
SLAIN1
BHLHA9
BEST1
MFSD14A
BTBD18
MTRF1L
ARHGEF1
TCF3
BOLA3
LRRC40
ACADM
SYNGR3
PANK3
GFER
DIAPH1
H4-16
H2AJ
ZNHIT2
TM7SF2
FAU
WDR73
UBE2Z
NMB
STIMATE-MUSTN1
STIMATE
CDK11B
BRAF
CASP6
RSAD1
MARCHF7
ERCC6L2
CHAD
SLC50A1
P4HB
EFNA1
ZNF358
PRRC2A
MCOLN1
AIF1
TNKS1BP1
MARCHF6
FAM20B
COMMD3-BMI1
COMMD3
BMI1
TUSC2
STK36
RNF25
RASSF1
PAXBP1
MYBL2
MLST8
CASKIN1
ARHGEF11
SLC24A1
PMF1-BGLAP
PMF1
SKIDA1
MTARC1
MLLT10
H3C10
H2BC13
H2AC13
DLG4
ACADVL
C7orf25
IREB2
LBR
WDR27
C6orf120
VWA7
TMEM109
SLC25A53
FAM199X
PHIP
DEDD
CCZ1B
KCTD5
VANGL2
H3C12
H2BC17
H2AC17
WIZ
FAM228B
DNAJB12
COG2
ANKFY1
TIGD1
SMIM19
SLC20A2
EIF4E2
RRNAD1
ISG20L2
ARHGAP35
AP2S1
THOC5
LRP6
SPDYE5
CALM1
TMSB10
THAP11
NUTF2
CENPT
SEC61A2
JAK1
NUCKS1
LOC102724770
DGCR6
TRIP13
TFAP4
PRDX1
NSFL1C
BRD9
PDPK1
FOXJ3
CEMP1
RNF187
TGM1
RABGGTA
URB2
TTC5
TAF5L
HYAL2
ARSG
PUF60
TPTEP2-CSNK1E
TGDS
SMIM13
NBPF15
GPR180
FPGS
EDEM1
KLHL11
PTPN11
FAM177A1
ARID3B
ZNF48
LATS1
CCDC38
AMDHD1
GATAD2B
AKT2
SLC25A11
SCFD1
RNF167
PFN1
ENO3
PXK
CCSAP
SCAI
RPS10-NUDT3
RPS10
CHD8
CCDC51
ATRIP
ZBTB6
TOMM20
THAP3
RC3H2
PATJ
MAPK11
LAMTOR3
DCAF10
SDCCAG8
METRN
CEP170
WDR48