ChIP-Atlas: Colocalization analysis

Colocalization analysis for RELA

Query protein: RELA

Cell class: Blood

Sort key: SRX017907 | GM12878

Color legends

ChIP-seq data:

H-H

H-M

M-M

H-L

M-L

L-L

N.D.

Same

(Peak intensities are High, Middle or Low)

STRING data:

1000

750

500

250

0

N.D.

(Values = STRING's binding scores)

Downloads: TSV (text), GML (Cytoscape)

Links: Movie and Document for ChIP-Atlas Colocalization

Cell types

Exp. IDs

RELA's Colocalization partners

◢ RELA: Average

◢ SRX4401061: BJAB

◢ SRX4401062: BJAB

◢ SRX4401063: BJAB

◢ SRX4401064: BJAB

◢ SRX4401065: BJAB

◢ SRX4401066: BJAB

◢ SRX5371742: CD4+ T cells

◢ SRX5371743: CD4+ T cells

◢ SRX017887: GM10847

◢ SRX017888: GM10847

◢ SRX017889: GM10847

◢ SRX017890: GM10847

◢ SRX017891: GM10847

◢ SRX150606: GM10847

◢ SRX017905: GM12878

◢ SRX017906: GM12878

◣ SRX017907: GM12878

◢ SRX017908: GM12878

◢ SRX150557: GM12878

◢ SRX2837382: GM12878

◢ SRX017911: GM12891

◢ SRX017912: GM12891

◢ SRX017913: GM12891

◢ SRX150605: GM12891

◢ SRX017882: GM12892

◢ SRX017883: GM12892

◢ SRX017884: GM12892

◢ SRX150365: GM12892

◢ SRX017875: GM15510

◢ SRX017876: GM15510

◢ SRX017877: GM15510

◢ SRX017878: GM15510

◢ SRX017879: GM15510

◢ SRX150608: GM15510

◢ SRX017863: GM18526

◢ SRX017864: GM18526

◢ SRX017865: GM18526

◢ SRX017866: GM18526

◢ SRX017867: GM18526

◢ SRX017900: GM18526

◢ SRX017901: GM18526

◢ SRX017902: GM18526

◢ SRX150361: GM18526

◢ SRX150362: GM18526

◢ SRX017894: GM18951

◢ SRX017895: GM18951

◢ SRX017896: GM18951

◢ SRX017897: GM18951

◢ SRX150610: GM18951

◢ SRX017870: GM19099

◢ SRX017871: GM19099

◢ SRX017872: GM19099

◢ SRX150353: GM19099

◢ SRX017858: GM19193

◢ SRX017859: GM19193

◢ SRX017860: GM19193

◢ SRX150359: GM19193

◢ SRX790965: L-1236

◢ SRX790966: L-1236

◢ SRX256997: Lymphoblastoid cell line

◢ SRX256998: Lymphoblastoid cell line

◢ SRX256999: Lymphoblastoid cell line

◢ SRX257000: Lymphoblastoid cell line

◢ SRX7083406: RAMOS

◢ SRX1460847: Th1 Cells

◢ SRX1460848: Th1 Cells

◢ SRX4001966: THP-1

◢ SRX4001967: THP-1

◢ RELA: STRING

GM12878

RELA

↻

GM18951

RELA

↻

GM12892

RELA

↻

GM19099

RELA

↻

GM19193

RELA

↻

GM12892

RELA

↻

GM18526

RELA

↻

GM19193

RELA

↻

GM18951

RELA

↻

GM10847

RELA

↻

GM19099

RELA

↻

GM19099

RELA

↻

GM19193

RELA

↻

GM15510

RELA

↻

GM18951

RELA

↻

GM10847

RELA

↻

GM18526

RELA

↻

GM19099

RELA

↻

GM18526

RELA

↻

GM12878

RELA

↻

GM12878

RELA

↻

GM12891

RELA

↻

GM15510

RELA

↻

GM12878

RELA

↻

GM12878

RELA

↻

GM18526

RELA

↻

GM15510

RELA

↻

GM19193

RELA

↻

GM12891

RELA

↻

GM12892

RELA

↻

GM10847

RELA

↻

GM15510

RELA

↻

GM12891

RELA

↻

GM12878

RELB

↻

Th1 Cells

RELA

↻

GM12891

RELA

↻

GM18526

RELA

↻

GM18526

RELA

↻

GM18951

RELA

↻

GM12878

RELA

↻

GM12878

RELB

↻

L-1236

NFKB2

↻

GM12878

REL

↻

GM12878

EP300

↻

GM12878

EP300

↻

GM12878

NFKB1

↻

L-1236

NFKB1

↻

GM12878

NFKB1

↻

GM12878

EP300

↻

GM12878

EP300

↻

L-1236

NFKB1

↻

GM12878

EP300

↻

L-1236

NFKB2

↻

GM12878

NFKB2

↻

GM12878

EP300

↻

GM12878

EP300

↻

GM12878

EP300

↻

GM12878

EP300

↻

GM12878

FOXM1

↻

GM12878

TBL1XR1

↻

GM12878

MED1

↻

GM12878

EP300

↻

GM12878

EP300

↻

GM12878

BCL3

↻

GM12878

NFIC

↻

GM12878

BCL11A

↻

GM12878

ATF2

↻

GM12878

PAX5

↻

BJAB

RELA

↻

GM12878

TCF12

↻

GM12878

MTA3

↻

GM12878

IKZF1

↻

GM12878

NFATC1

↻

GM12878

TCF3

↻

GM12878

STAT5A

↻

GM12878

IRF4

↻

GM12878

MED1

↻

GM12878

MEF2A

↻

GM12891

POU2F2

↻

GM12878

POU2F2

↻

GM12878

CEBPB

↻

GM12878

BCLAF1

↻

Lymphoblastoid cell line

BRD4

↻

GM12878

EBF1

↻

GM12878

BATF

↻

GM12878

NFKB2

↻

BJAB

RELA

↻

GM12878

EP300

↻

GM12878

EBF1

↻

GM12878

RUNX3

↻

MM.1S

MED1

↻

MM.1S

BRD4

↻

GM12878

BHLHE40

↻

MM.1S

MED1

↻

GM12878

CHD2

↻

BJAB

RELA

↻

BJAB

RELA

↻

MM.1S

BRD4

↻

GM12878

PML

↻

GM12878

SP1

↻

Lymphoblastoid cell line

BRD4

↻

OCI-LY-10

STAT3

↻

THP-1

RELA

↻

MM.1S

MED1

↻

MM.1S

BRD4

↻

Lymphoblastoid cell line

NR3C1

↻

Lymphoblastoid cell line

NR3C1

↻

GM12878

MEF2C

↻

MM.1S

IRF4

↻

HBL-1

POU2AF1

↻

GM12878

TBP

↻

BJAB

RELA

↻

BJAB

RELA

↻

B cells

MEF2B

↻

GM12878

NIPBL

↻

B cells

BCL6

↻

GM12878

PAX5

↻

Lymphoblastoid cell line

VDR

↻

GM12878

SPI1

↻

Lymphoblastoid cell line

BRD4

↻

GM12878

CREB1

↻

Lymphoblastoid cell line

SPI1

↻

GM12878

IRF3

↻

U-2932

STAT3

↻

GM12878

STAT3

↻

Multiple Myeloma

BRD4

↻

K-562

HSF2

↻

K-562

HSF2

↻

K-562

HDAC6

↻

GM12878

EZH2

↻

K-562

ZC3H11A

↻

GM12878

ESRRA

↻

GM12878

STAT1

↻

GM12878

SUPT20H

↻

GM12878

KAT2A

↻

MV-4-11

KMT2A

↻

K-562

KDM5B

↻

K-562

HDAC8

↻

K-562

NR4A1

↻

SU-DHL-6

STAT3

↻

OCI-LY1

MED1

↻

MM.1S

MED1

↻

MM.1S

MED1

↻

GM12878

TAF1

↻

GM12892

TAF1

↻

GM12891

TAF1

↻

GM12878

MYC

↻

SU-DHL-2

STAT3

↻

GM12878

SPI1

↻

GM12878

SPI1

↻

MV-4-11

BRD4

↻

Monocytes-CD14+

STAT1

↻

MM.1S

BRD4

↻

GM12878

SREBF1

↻

B cells

BCL6

↻

GM12878

SPI1

↻

Lymphoblastoid cell line

SPI1

↻

Lymphoblastoid cell line

SPI1

↻

Lymphoblastoid cell line

RELA

↻

Lymphoblastoid cell line

NR3C1

↻

T cells

TP53

↻

T cells

TP53

↻

T cells

TP53

↻

T cells

TP53

↻

K-562

NCOR1

↻

K-562

HNRNPUL1

↻

OCI-LY-7

EZH2

↻

K-562

HSF2

↻

Plasma Cells

MED1

↻

K-562

CBX3

↻

K-562

SETDB1

↻

P493-6

CDK9

↻

K-562

CBX3

↻

K-562

HDAC6

↻

K-562

HDAC1

↻

K-562

SETDB1

↻

GM12878

MYC

↻

B cells

CREBBP

↻

GM12878

EP300

↻

CAR-T cells

IRF4

↻

Th1 Cells

TBX21

↻

B cells

BCOR

↻

KMS-28PE

EZH2

↻

KMS-28PE

EZH2

↻

KMS-28BM

EZH2

↻

OCI-LY1

BRD4

↻

P493-6

MED1

↻

Lymphoblastoid cell line

VDR

↻

Lymphoblastoid cell line

RELA

↻

K-562

KAT2B

↻

MM1.RL

NR3C1

↻

K-562

GTF2F1

↻

SU-DHL-4

STAT3

↻

Th1 Cells

TBX21

↻

T cells

TP53

↻

T cells

TP53

↻

K-562

NCOR1

↻

KMS-28BM

EZH2

↻

SU-DHL-4

BCL6

↻