ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2010897 | Embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◣ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ppr-Y
CARPB
CG1354
Ptpmeg2
CG3106
CadN
snu
Sid
CG33346
cmpy
CG34260
CG1077
Osi1
Cpr76Bc
Cpr76Bb
Cpr76Ba
sbr
Imp
CG15210
CG15209
unc-5
Hr51
Rubicon
CAH3
Dys
CG15025
TwdlE
lectin-28C
CG14535
CG8119
CG8117
Shmt
CG4020
CG3726
CG12236
Act5C
Abd-B
VhaM9.7-d
Actn3
slbo
bs
Spn
CG32295
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
wgn
Npc2b
CG9920
CCHa1
CG43980
soti
prage
Adar
CG42700
Cam
l(1)sc
TfAP-2
sNPF-R
CG14186
CG14185
Tak1
CG42579
Sox21a
sgll
CG34384
CG31473
CG3014
CG2993
CG18268
DNaseII
CG7794
CG7785
Ldh
CG10163
Best2
nxf4
CG43290
CG31496
CG31275
stl
CycB
CG42260
CG30271
blw
Usp30
mof
CG16721
raskol
GAA1
Tlk
Rala
Tsp68C
Hml
CG8757
CG8750
CG43184
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Ipk1
Cib2
Tpst
CG46311
CG32633
CG32631
CG11816
Socs16D
CG12986
CG6398
N
kirre
Odc2
Odc1
CG14762
CG15919
CG15615
CG5568
CG18586
CG44439
CG30369
CG2291
CG14760
CG14759
RpS2
mtDNA-helicase
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
Mef2
betaTub60D
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
Neu2
CG7519
CG7202
croc
sick
CG13962
CG34165
CG15282
CG12730
shot
DJ-1alpha
CG6118
Act88F
CG10481
CG3556
lace
Fancm
Ent3
CG32107
CG10943
for
Drgx
Fmr1
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
CG15429
Atet
scb
Fs
zen
bcd
Ama
Scp2
CG14903
CG14891
dar1
CG14974
CG10359
CG10357
Pde8
retn
EbpII
Ebp
CG9380
Svil
CG16762
CG34435
CG34434
RhoGAP5A
Pop1
Mlc-c
Esyt2
Ubr1
mRpS33
ema
CG31279
CG17565
CG14881
shop
htk
Rab3-GEF
Lsd-2
CG9065
CG5599
CG33178
CG33177
CG15027
nej
btd
Gr98d
Gr98c
Gr98b
CSN3
CG3288
CG13255
CG11456
Cpr100A
CG15546
CG15545
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
RpLP2
CG8311
CG8306
CG8303
CG5089
CG43693
CG7888
PDZ-GEF
SPE
GILT3
GILT2
eIF3d1
CG18754
CG16710
Or67c
dila
CG30001
otp
CAH15
Rx
Wnt4
CHES-1-like
CG15478
CG3358
Nc73EF
Cpr73D
ftz-f1
sim
CG43063
timeout
CG16898
Rlip
CG5697
CG17278
CG12007
CG14082
fz2
flz
ftz
Scr
EcR
CG31960
bowl
bark
sens
flr
CG10222
Mst36Fb
CG43339
CG43338
CG42268
Indy
CG42680
Gbs-76A
fal
sm
CG43277
CG42753
CG18367
CG15124
TotX
hdly
Grik
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
Aps
LSm7
glu
ChLD3
BuGZ
siz
chn
Sox100B
dco
Chchd3
LanB2
CG3335
CG32461
RpS21
CG3117
CG3104
CG2991
CG2983
CG18557
CG43332
Eh
CG14331
CG14330
Lcp65Ag3
Lcp65Ag2
l(3)mbn
Cpr65Au
Vm32E
CG4788
Ca-beta
Lcp65Ag1
CG10365
nau
CG10232
wdp
Gp150
SNF4Agamma
upd2
Sfp84E
Os-C
CD98hc
CG13465
BobA
mdy
Cse1
CG13280
CG13272
InR
Got1
CysRS
CG30094
toy
fuss
CG43066
CG42346
CG42784
TM9SF3
mthl2
Eaf6
CG10591
Glut3
obst-E
CG9171
Act57B
Cyp12e1
CG46270
elav
CG4293
Appl
Paip2
CG7381
CG7091
CG31342
CG14383
Rrp46
Irp-1B
CG6345
CG6325
CG3638
CG11403
ham
CG8945
CG4955
wcy
CG4949
CG43077
RagA-B
CG11970
CAHbeta
pkaap
Cyp303a1
crp
CG17329
CG13258
viaf
Pop2
Grip163
CG6928
sced
Opbp
geminin
Dpit47
Adf1
CG9410
CG15908
ScpX
CG33120
CG31752
CG17597
CG17321
CG10600
CG8180
mthl14
E(bx)
mdlc
CG4390
CG17193
mtSSB
CG6126
CG31287
CG43658
Ufd1-like
Sod1
nol
NaPi-III
mRpL2
FoxK
CG32074
Kank
Lap1
CG12853
ADPS
CG10257
CG15040
RapGAP1
Wdr62
CG31663
CG15358
Su(var)2-HP2
Sec61beta
Had2
CG12863
lobo
dan
CG13654
CG13653
CG43867
CG3713
CG14635
Picot
CG34458
CG34457
GABA-B-R3
Eaat2
RpS28a
Mgat2
CG7920
Axn
CG8301
CG33654
Son
Kap-alpha3
CG9399
CG9396
CG16790
CG16789
vig
vas
TfIIS
solo
ck
CG33679
CG13192
Timp
CG14459
shd
HGTX
CG12617
Mes2
CG9988
CG14062
CG10011
gol
CG13229
Cyp12d1-d
BBS4
HisRS
Ggt-1
CG6481
CG6470
Bx
CG5890
CG5886
CG14545
TfIIA-S
tbrd-1
Pli
ome
CG4914
CG43121
mRpL13
CG10602
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
cnn
CG30062
cbs
Oaz
phyl
SPARC
Rb97D
ms(3)K81
CG5500
Lerp
IntS12
His2Av
ball
Pde1c
CycY
crol
CG13151
achi
fra
CG8818
CG8569
CG33632
Srpk79D
Rich
Ddx1
Csp
CG11523
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
Mtpalpha
jp
brwl
gcm
CG31709
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
Asator
Zasp66
Cdc6
S-Lap2
GAPsec
Lk
CG34039
CG42758
larp
Or98b
Moca-cyp
Gfat2
CG31191
Atpalpha
tapas
MED8
CG8929
PIG-K
east
Ufl1
Ref1
Dpck
CG1965
CG1943
CG1105
Tsp
Nse1
Nhe3
cort
CG11327
Pex3
Pdi
FucTA
CG32147
CG12316
CkIIalpha-i3
CG13896
CG13895
CG9497
ppk7
ppk14
CG9500
CG9498
Dlg5
CG4970
CG43153
CG14930
CG14929
CG7956
stc
CG15269
Lasp
Dab
CG9692
CG43954
Eglp4
Eglp2
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
apt
CG7509
CG18808
Patj
JTBR
dlt
CG42676
CG12020
Cdc37
alpha-Spec
CG34268
CG34267
dnc
Cyp308a1
cpo
Rim
CG43445
Gsc
CG13689
ush
CG12502
dpr20
Dci
Ndae1
CG31909
CG13786
mtd
Tim17b1
Reg-2
CG13893
ORY
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
Trissin
obe
CG5213
Rh6
zfh1
RpL37a
CG2841
Raf
mRpL14
Ilp6
Prm
Fhos
CG6576
CG13306
par-6
chas
CG8188
fz3
tw
CG16989
CG13360
scramb1
CG8065
CG32055
Sr-CII
RpS11
CG8858
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
Pglym87
Cyp6t3
Jupiter
CG6808
CG14711
CG14710
CG10324
CCT3
modSP
CG14907
CG14906
tkv
Cyp4ac3
Bub1
Bsg25D
vri
vir-1
SC35
eRF3
CG6405
CG6388
CG5446
CG5435
SRPK
dup
Pms2
Ttd14
slim
rswl
Prp19
CG5189
CG30120
CG17669
dnd
CG6678
CG43844
fit
CG31465
CG17819
Trx-2
GlcAT-S
gcm2
RpS15Aa
Jafrac1
IP3K2
CG15747
Poc1
ImpL1
CG14110
CG14107
CG10171
GNBP2
CG42495
Capr
GNBP1
vlc
scaf
Cndp2
Pez
Cpr
Mbs
Diap1
ssp6
CG6610
CG13295
CG13293
zip
uzip
Ppn
mIF2
CG14270
CG12206
CG10804
CG10803
CG10802
Zasp52
CG33465
CG3355
CG12496
gt
CG32797
CG31038
CG31036
CG15517
CG15515
spel1
Send2
Rab14
Pgant35A
mTTF
l(2)34Fd
l(2)34Fc
CG43052
pdgy
eag
CG9030
Rpn12R
ind
EAChm
CG43680
CG43679
CG43678
CG18649
CG18581
CG13461
CG12310
dnt
CG13086
CG17349
Rift
RhoGAP100F
FeCH
CG42233
CG1971
Egm
CG9005
CG9777
SNRPG
RpS19a
Rok
mthl1
Osi9
Osi8
Osi7
Osi10a
Usp47
DnaJ-1
GCS2alpha
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
velo
Ist1
dikar
CG8549
Rsph3
Snp
CG44249
CG13501
CG13500
Myd88
Oseg2
CG9018
ACXD
CG32301
AP-2alpha
RpLP1
ebi
CG13692
CG13690
CG11885
BBS8
ex
Or43b
MFS12
Kdm4A
Cul1
CG12159
CG14688
CG6465
Ugt49B2
CheB93b
CheB93a
CG7907
waw
Sep1
bbx
MCU
CG10949
Arpc2
CG15130
CG10947
Eip75B
TyrRII
CG14321
Lgr1
Atg8b
CG33557
CG2990
Cht6
scrib
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
Lk6
l(3)neo38
SIFaR
smash
eIF3f1
su(w[a])
TfIIA-S-2
CG14631
Smyd4-3
CG7763
CG34054
CG30026
CG5819
pk
CG33140
CG30385
CG30384
retm
Rchy1
frj
CG9527
Mipp1
CG43206
CG4229
CG13324
CG13323
CG33226
CG30287
CG30286
CG30283
stg
SP1029
CG45544
CG31445
Rgk3
ASPP
CG12017
CG12009
Pcf11
Cyp6a9
Cyp6a23
Cyp6a22
Cyp6a19
Cyp6a17
Vm26Ac
Vm26Ab
Sfp26Ad
Gpdh1
CG9044
CG13999
CG13998
rols
mRpL55
CG6040
cdi
ATPsynD
Gr59d
RpL37b
Gr59c
CG42703
CG9876
CG13538
CG34211
Tbce
SCAP
CG14591
sigmar
Sesn
l(2)dtl
CG5504
CG46429
CG18128
Alg3
Mst89B
bor
asun
galectin
dbr
CG11374
Cda5
Edg84A
Ccp84Ag
Ccp84Af
Ccp84Ae
Ccp84Ad
lab
Gr89a
Decay
CG42342
Cad89D
Sox102F
fd102C
Pcd
Obp99d
Obp99b
Naa40
Kul
Dup99B
CG34296
CG18731
CG15506
Pax
Lectin-galC1
lectin-37Db
lectin-37Da
CG13085
Alp12
beat-IIIc
CG33128
CG31928
CG31926
CG31661
CG18131
SecS
Rga