ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2638363 | S2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◣ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

kl-5
His2B:CG33910
His2B:CG33908
His2B:CG33906
His2B:CG33904
His2B:CG33902
His2B:CG33900
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33882
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33804
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
Cib2
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
Pzl
CG33226
CG30287
CG30286
CG30283
par-1
Abd-B
bun
Svil
Hr78
Est-Q
sgll
CG34384
CG31473
CG2993
l(3)mbn
Gle1
beta3GalTII
Vps25
Gss2
Gss1
Gpa2
Got1
CG43658
Lasp
Dab
CG43954
CG12106
CG12056
CG12115
CG12057
frac
CG14837
Pex7
Arr2
CG1090
Pde8
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
pyd
CG43338
CG11131
slif
CG15734
HisRS
CG6481
CG6470
Bx
ctrip
CG6220
HnRNP-K
Trx-2
GlcAT-S
gcm2
snu
Sid
CG33346
InR
Prm
Fhos
CG13306
Pax
Lectin-galC1
lectin-37Db
lectin-37Da
RapGAP1
TfAP-2
His3.3B
fh
Bap111
CG9005
pkaap
crp
CG17329
CG43693
GlyP
CG4259
Mo25
CG44666
CG43711
CG43710
CG43709
CG7900
CG7910
ush
Sox21a
mdy
CG13280
Sox100B
dco
His1:CG33852
His1:CG33807
His1:CG33819
His1:CG33810
His1:CG33861
His1:CG33858
His1:CG33855
Aps
mtd
Tim17b1
unc-5
CG32457
Pdha
shot
DJ-1alpha
SPoCk
Pif1
Pgant4
CG31776
Mtpalpha
gcm
CG31709
Pde1c
CycY
CG10949
CG10947
Arpc2
CG15399
HINT1
colt
Snoo
CG14270
CG10804
CG10803
CG10802
Cyp309a1
CG14974
CG10359
CG10357
Pdp1
TwdlE
lectin-28C
CG14535
CG31406
jumu
firl
DNaseII
CG7794
CG7785
nxf4
CG43290
CG31496
PK1-R
CG9920
CCHa1
Myd88
DIP-beta
CG4293
Appl
RpS28a
Mgat2
Axn
Prp31
Msh6
CG7011
CG6878
CG32512
Mef2
CG12426
CG15615
udd
Cul4
wcy
CG4955
CG4949
RpS21
CG3104
CG2991
CG12535
RpS2
Muc30E
CG32295
Spn
Tpst
CG46311
CG32633
CG12007
RpLP2
Cdk4
Tlk
Irk1
Ssk
stg
SP1029
CG45544
zip
uzip
Cka
scyl
CG44439
CG14760
Sgs8
Sgs7
Sgs3
CG7512
RpS11
CG8858
CG1354
CARPB
CG3556
Dll
CG42851
Panx
CG9485
Ufd1-like
NaPi-III
mRpL2
FoxK
CG7460
CG8306
CG5089
Syn2
nAChRalpha6
Fkbp59
CG4537
CG34183
Asator
CG10041
CG10038
CG42268
Smyd5
Oga
Nelf-A
CG3337
ssx
CG14770
CkIIalpha-i3
CG13896
CG13895
SNF4Agamma
Cyp12e1
bor
asun
Nc73EF
Cpr73D
mtSSB
CG6126
CG31287
CG13116
CG13117
Muc96D
bcd
Ama
CG9171
Obp99d
Obp99b
Dup99B
CG15506
retm
frj
CG3358
CG11459
CG12009
CG11883
CG31275
Rubicon
CAH3
CG34260
CG7956
Sur-8
CG42824
CG42823
CG42798
CG34280
CG34279
Adhr
Adh
CG33120
CG31752
CG10600
pnut
Burs
Indy
Dys
CG15025
Vha13
Nup58
CG6195
CG31220
CG31219
CG8034
nrv2
CG43610
CG17376
CG31909
CG43101
mthl14
E(bx)
SMSr
smid
CHES-1-like
Gr89a
Decay
Cad89D
CG14903
CG14891
GILT3
GILT2
eIF3d1
CG18754
CG16710
caps
CG13690
ebi
AP-2alpha
sev
ana
Sgs1
hoe2
CG14044
CG34054
CG30026
CG7763
CG12947
MtnA
CG8500
CG31191
Atpalpha
Obp51a
Mid1
stl
CycB
NLaz
CG31659
Sgs4
Pig1
BBS4
Muc26B
CG31639
Tsp68C
Hml
CG8757
CG8750
CG10481
nej
Eaat2
IFT52
Ent2
COX5BL
COX5B
CG9596
Nrt
sky
RPA2
Mtp
CG9272
CG43739
rols
Adgf-E
CG43689
CG34281
CG14327
CG14326
CG14324
CG14323
His1:CG33816
Rbp6
CG6512
Gbs-76A
fal
Sfp84E
Os-C
CD98hc
Rim
cpo
CG13970
scrib
CG9692
CG7231
Ent1
CG18371
nrm
CG31324
Wnt4
prage
Adar
Reg-2
CG13893
Gycbeta100B
CG15556
CG5568
CG18586
Mur82C
Zasp52
CG33465
psq
TMS1
fax
CG6650
Ptip
endos
CG11360
Cyp309a2
lectin-21Ca
CG2839
CG15478
Npc2b
otp
CAH15
CG13192
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15533
CG33128
CG31928
CG31926
galectin
CG11374
PGRP-LC
PGRP-LA
CG43133
CG43066
CG14082
jb
cnc
CG42674
CG7747
Atg9
SPR
CG43332
CG42329
CG12502
CG34268
fl(2)d
CG6329
CG13339
Phax
Mys45A
Su(var)2-10
GstE13
CG31559
CG12863
lace
OXA1L
galla-2
Cpr67Fa1
CG6409
Rsbp15
Cog1
CG4860
CG17404
CG12256
CG9896
CG7509
CG18808
Usp10
CG13907
CG3603
CG17959
CG14423
Argk
CG3662
PGAP2
Clp
CG15880
Saf6
Pex12
SLIRP1
anox
Dd
CG1486
CG18545
CG34417
CG14762
lectin-46Cb
CG1648
nau
CG10365
CG10232
Rlip
CG5697
CG13689
lectin-46Ca
CG34033
CG30001
CG13293
Pex3
Pdi
FucTA
CG32147
Sprn
CG5906
Gr98d
Gr98c
Gr98b
CG9593
alpha-Man-IIb
Femcoat
Muc4B
CG43135
CG43134
for
CG1850
skd
mRpL24
betaggt-I
zf30C
und
Taf11
E(Pc)
mRpS33
CG31279
CG17565
CG14881
CG4020
CG12236
sced
Dpit47
Adf1
tzn
Spc105R
CG3698
CG9988
CG10011
CG34205
CG11269
a
CG5674
CG14947
CG3091
CG3078
temp
CG3071
dpr4
bru2
Mip
CG7692
CG42700
kis
Rpp30
CG14693
PAN3
CG32486
Vm34Ca
oys
CG34220
ZnT77C
ND-39
CG32425
CG18281
Smyd4-3
SK
Amacr
Ns4
N
vir-1
CG6405
CG6388
CG5446
CG31960
bark
CG13962
Wdr62
CG31663
CG15358
Cpr100A
CG15545
ham
RpIIIC53
mus304
CG7341
CG32195
mRpL55
CG6040
cdi
ATPsynD
Nepl16
CG34027
Vlet
bif
l(1)G0004
Pp2B-14D
Bka
Ih
CG34393
Gfat1
CG42335
Gug
CG15773
sbr
CG12986
gol
rtv
Lint-1
Dlic
flr
CG10222
slbo
Rala
Eglp2
CG8818
CG8569
CG33632
IM18
Eglp3
Eglp1
CG43209
CG42560
CG42559
CG10332
TM9SF3
mthl2
Eaf6
CSN3
CG13255
CG11456
Mbs
Diap1
TTLL4A
piwi
CG12253
Sytalpha
Oli
CG6870
wdp
CG5819
CG13023
CG11905
fab1
CG33981
aft
CG3168
CG12147
snRNP-U1-70K
smt3
Dad
sip2
Coprox
CG14478
CG12506
CG13946
zfh2
Osi16
CG46396
CG46026
Osi17
CG31560
CG34283
CG5535
CG34002
Eip74EF
Obp56f
Obp56e
CG8517
jim
CG45428
CG11226
sPLA2
CG11123
plh
CG32944
CG31528
chn
fne
Nckx30C
Cyp4e3
ome
CG43121
Bub1
Bsg25D
scpr-B
scpr-A
CG5214
CG17734
velo
PIG-K
east
Ist1
CG8549
CG9018
ACXD
Son
Kap-alpha3
CG9399
CG9396
CG16790
PNUTS
dbe
aru
pan
cnn
cbs
Gbp2
CG43107
CG43103
CG42680
CG6123
CG6106
SteXh:CG42398
Ugt37B1
Prip
CG8501
Kdm2
Nmdmc
Mst85C
CG3842
orb2
CG11345
Or49a
Cpr49Ad
Cpr49Ac
CG15024
CG15023
CG15022
CG31683
CG18858
CG31687
Rh5
Hacd1
polo
alphaSnap
SCCRO4
CG32225
CG42238
Itgbn
CG1077
RpL28
Larp4B
eIF1
CG30345
Calx
shn
rgn
wgn
siz
PDZ-GEF
Spn28Da
CG7102
Spn28Db
htk
shop
ftz-f1
CG5890
CG5886
CG14545
Mp
Lk
CG42758
CG34039
Cpr30B
CG17855
CG13113
CG14416
CG34253
CG6983
SP1173
bin
Xpac
cib
CG6379
CG15375
brn
CG14072
Sarm
sisA
GstS1
CG30456
Jra
RpLP0-like
14-3-3zeta
CG15629
Sox15
CG43291
st
CG42514
Cpr67B
CG32354
Cbl
Srp72
Sep2
EloB
Srp14
CG34008
CG32450
Cpsf5
CG4022
zyd
CG4835
CG16953
Liprin-gamma
CG11298
Tsp3A
Seipin
eIF3g1
Ir20a
Naam
Acox57D-d
Nfs1
CG18787
Osi1
Maf1
dikar
puml
CG5953
CG10280
CG44838
CG17574
bic
sunn
Bmcp
CG13473
Eh
SP555
CG14042
Loxl1
CG11334
CG11333
cindr
upd2
Vsx2
rswl
Prp19
CG5189
CG30120
Cp1
CG42806
Ppn
mIF2
St4
PheRS-m
CG18568
stumps
CG7987
CG44094
pHCl-1
TotM
Ncoa6
cype
CG14022
rdgC
Spp
nAChRbeta3
lwr
mad2
Pdss2
Mhcl
Akt1
NimC3
hll
Rint1
RhoGEF4
CG8607
Tret1-1
CG42534
Sh3beta
akirin
CG32052
CG17298
CG14448
meigo
Cdc23
Cyp4d8
CG8539
Vha44
dpr20
CG11873
Tak1
CG42579
raskol
Toll-7
Tsp
Nhe3
CG11327
mdlc
CG4390
CG17193
RpLP1
SIFaR
CG13692
CG11885
BBS8
tna
CG7573
VhaAC39-2
unk
CG13829
CG32117
CG12520
CG1421
tej
sip1
CG14006
CG11149
CG11030
Gale
Mur11Da
CG15721
Rap1
HBS1
CG12025
CG3348
Hmu
bigmax
fdl
CG12024
scrt
CG11629
Or63a
CG34025
Set1
CG5078
CG6168
CG13616
AGO1
mRpL53
CG33155
Rpn13
cic
sif
CG46320
CG14692
spdo
Ptpmeg2
CG3106
Usp30
CG16721
CG1688