ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX085405 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal discs

◢ SRX085404: Kc167

◣ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Rbfox1
SP1173
CG8519
CG13465
BobA
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
Hk
Eh
CG14331
CG14330
CG31064
CG42814
CG31068
CG42813
RpS2
mtDNA-helicase
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
MBD-R2
CG44956
CG4115
CG10041
CG10038
Mtpalpha
jp
brwl
gcm
CG31709
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
OXA1L
galla-2
CG6418
CG6409
Blos4
Rlip
CG5697
CG17278
CG46468
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
CG14459
mthl8
Usp7
Cyp318a1
Cyp311a1
Ten-a
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
Lmpt
CG32170
Oatp30B
Cpr30B
CG17855
CG13114
CG13113
eya
GNBP2
GNBP1
CG42495
Capr
Odc2
Odc1
CG14762
Vm32E
CG4788
Ca-beta
nerfin-2
CG33784
Alp13
CG33783
cher
cm
CG4593
CG42308
CG32736
CG3032
Spn28Db
Spn28Da
SmE
CG7102
CG34132
beat-IIIc
CG32461
obst-E
CG9171
flz
sNPF-R
CG14186
CG14185
GlyP
CG4259
Sfp84E
Os-C
CD98hc
betaTub60D
Abd-B
CG5906
Sprn
CCDC151
dnc
Snp
CG44249
CG13501
CG13500
Wnt4
cmpy
CG34260
tna
CG31275
CG6118
Act88F
TwdlE
lectin-28C
CG14535
Rift
RhoGAP100F
FeCH
CG42233
CG1971
Calx
CG43446
Cpr100A
CG15546
CG15545
CG43055
CG32117
CG12520
TfAP-2
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
CG42327
CG14715
PIG-K
east
Nepl19
Nepl18
Nepl17
Usp30
mof
CG16721
CG14634
CG11664
Tsp
Nse1
Nhe3
cort
CG11327
sm
CG43277
CG42753
CG18367
CG15124
pan
Wdr62
siz
larp
Or98b
Moca-cyp
Gfat2
SIFaR
CG42784
Or67d
can
Npc2b
CG9920
CCHa1
PK1-R
CG12402
mRpS33
ema
CG31279
CG17565
CG14881
Gycbeta100B
CG15556
CG15554
SPE
GILT3
GILT2
eIF3d1
CG18754
CG16710
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
nuf
CG7924
CG7906
CG34244
ome
CG4914
CG43121
TM9SF3
mthl2
Eaf6
CG10591
CG14270
CG12206
CG10804
CG10803
CG10802
stl
CycB
CG42260
CG30271
blw
vir-1
SC35
eRF3
CG6405
CG6388
CG5446
CG5435
mthl14
E(bx)
Mp
CG10139
Adgf-E
DCX-EMAP
Trissin
obe
CG5213
scyl
lace
prage
Adar
TotX
hdly
Grik
Cyp12e1
CG46270
Shmt
CG4020
CG3726
CG12236
Act5C
Egm
CG9005
tzn
Spc105R
Six4
CG3698
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
mdy
Cse1
CG13280
CG13272
mdlc
CG4390
CG17193
PGRP-LC
PGRP-LA
CG3603
CG17959
CG14423
CG14422
CG14421
CadN
sick
Rpn12R
ind
EAChm
CG43680
CG43679
CG43678
CG18649
CG18581
CG13461
CG12310
CG13962
Ptp61F
CG2199
312
Ent3
CG32107
CG10943
Spn77Ba
alphaSnap
Spn77Bb
CG13481
polo
CG13151
achi
fra
CG8818
CG8569
CG33632
Picot
CG34458
CG34457
CG14417
CG14416
viaf
Pop2
Grip163
CG6928
stc
CG15269
tkv
Bub1
Bsg25D
Cyp4ac3
Syn2
CG14082
Spn75F
Got1
CysRS
CG30094
VhaM9.7-d
Actn3
Nc73EF
Cpr73D
CG1077
Osi1
Indy
Dscam1
dnt
CG17349
CG13086
Spn
CG32295
LanB2
CG3335
CG5897
CARPB
CG1354
SNF4Agamma
nau
CG10365
CG10232
abd-A
LSm7
glu
ChLD3
BuGZ
Mes2
CG12617
CSN3
CG3288
CG13255
CG11456
PCB
Ntmt
Lime
CG46338
CG30010
CG12744
CG31324
CG6142
spel1
Send2
Rab14
Pgant35A
mTTF
l(2)34Fd
l(2)34Fc
CG43052
Asator
Kank
Lap1
CG12853
ADPS
CG10257
Vsx2
ver
Tsf2
Pmm2
nst
Gcn5
eIF2beta
CG34242
RpS26
ncm
CG43980
ORMDL
MED1
CG32445
CG32444
Atox1
trio
CG9205
Nrt
CG13025
CG9705
Pcf11
Cyp6a9
Cyp6a23
Cyp6a22
Cyp6a19
Cyp6a17
CG15429
Atet
CG31663
CG15358
Cpr76Bc
Cpr76Bb
Cpr76Ba
CG3638
CG11403
CG12017
CG12009
tub
CG34112
CG14646
CG9855
lost
CG9853
CG14647
CG42346
ftz-f1
CG31038
CG31036
CG15517
CG15515
shot
DJ-1alpha
scb
Fs
Neu2
CG7519
CG7202
croc
scrib
plum
CG15373
capu
GCS2alpha
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
Ttd14
slim
rswl
Prp19
CG5189
CG30120
CG17669
CHES-1-like
CG15478
Usp47
DnaJ-1
wts
dj-1beta
cindr
Vago
sev
CG2076
CG3355
CG9593
alpha-Man-IIb
TAF1C-like
MESK2
Fkbp14
CG46395
Pex3
Pdi
FucTA
CG32147
CG12316
SecS
Rga
kra
Atu
asl
Pde1c
zyd
CG12061
CG9497
ppk7
ppk14
CG9500
CG9498
CG10481
zen
bcd
Ama
Prp31
Msh6
CG7011
CG6878
zda
CheA56a
CG30122
Pax
Lectin-galC1
lectin-37Db
lectin-37Da
CG13085
Alp12
CG15919
CG15615
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
CG31823
CG31821
CG31735
Tep1
Ptpmeg2
CG3106
Svil
CG16762
Scp2
CG14903
CG14891
wdp
Gp150
tx
CG6503
CG34291
Cyp308a1
CG33927
RagA-B
CG11970
CAHbeta
Gug
CG6983
Unr
Edg84A
Ccp84Ag
Ccp84Af
Ccp84Ae
Ccp84Ad
lab
Myd88
sky
RPA2
Mtp
CG9272
CG43739
Rrp46
Irp-1B
CG6345
CG6325
Sfp36F
CG43362
CG31787
CG5790
CG42680
Panx
CG9485
CG33655
CG30394
Fancm
CG12007
CG16898
CG8945
CG4955
wcy
CG4949
CG43077
Hers
amn
Rab3-GEF
Lsd-2
CG9065
CG5599
CG33178
CG33177
CG15027
Tak1
CG42579
Gr89a
Decay
CG42342
Cad89D
CG18063
CG12448
Su(var)2-HP2
Sec61beta
Had2
CG12863
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
RpI135
CG4213
Galphao
CG12895
chif
CG4455
CG44405
CG42266
CG42231
CaBP1
Rubicon
CAH3
Sr-CII
RpS11
CG8858
CG12782
CG42268
CG14947
prd
Pex19
Ubr1
CG8119
CG8117
phyl
Oaz
Rim
cpo
CG43445
Ldh
CG10163
Best2
Dys
CG15025
sr
Sox100B
dco
Chchd3
flr
CG10222
sens
sbm
nmdyn-D6
mRpS25
CG14414
Gr59d
RpL37b
Gr59c
CG42703
CG9876
CG13538
AP-2alpha
RpLP1
ebi
CG13692
CG13690
CG11885
BBS8
ex
bun
CG4161
nol
NaPi-III
CG32074
Ufd1-like
Sod1
mRpL2
FoxK
CkIIalpha-i3
CG13896
CG13895
CG12992
CG12991
Ankle2
Son
Kap-alpha3
CG9399
CG9396
CG8301
CG33654
CG16790
CG16789
PDZ-GEF
cnn
CG30062
cbs
CG34313
CG32832
CG31743
EbpII
Ebp
CG9380
GstT2
GstT1
CG30339
CG1902
CG12926
Lasp
Dab
CG9692
CG43954
Men
Tsp97E
Spag1
Gr97a
CG6330
Rab9E
CG2111
raskol
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
tow
CG14820
CG6163
Gr98d
Gr98c
Gr98b
CG3358
garz
Den1
CG8841
CG8839
CG8490
CG34021
ana3
CG44837
Vha13
subdued
Nup58
CG6195
CG6184
CG31220
CG31219
Mbs
Diap1
Smyd5
Oga
Nelf-A
CG5862
CG3337
hwt
Tlk
Rala
CG12502
dpr20
Dci
CG4603
CG4597
CG15213
CG15212
RpS21
CG3117
CG3104
CG2991
CG2983
CG5890
CG5886
CG14545
ssp5
Spt3
DCAF12
CG42505
CG42504
CG31358
for
Drgx
CG34007
sno
REG
CG44437
2mit
CG43693
CG7888
TwdlC
RYa-R
CG31077
CG31076
CG31075
CG14253
Tsp68C
Hml
CG8757
CG8750
CG43184
zip
uzip
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
CG43233
CG31683
CG18858
CG2493
Cdc23
CG1428
CG1421
CG11629
CG5062
CG12780
rdgC
CG32228
CycY
crol
Nepl16
CG34027
CG45095
N
kirre
CG7509
CG18808
CG7857
CG7276
CG7275
CG7272
CG13455
CG12355
Ran-like
ppk9
Gr58c
Gr58b
CG9304
CG34029
Gr58a
Paip2
CG7381
CG7091
CG31342
CG14383
RpS15Aa
Jafrac1
IP3K2
CG15747
wgn
RpL37a
TwdlZ
Twdlalpha
goe
CG32568
CG11873
mbl
CG43237
insv
Elba2
ND-B17.2
Drp1
CG15394
Arpc5
Gmap
CG6340
bt
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
RpLP2
CG8311
CG8306
CG8303
CG5089
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
par-1
snu
Sid
CG33346
Fmr1
Gbs-76A
fal
CG43332
CG33226
CG30287
CG30286
CG30283
Vps25
Gle1
CG8635
beta3GalTII
Cirl
CG8642
CG42700
Cam
fl(2)d
CG6347
CG6337
CG6329
CG13339
stg
SP1029
CG45544
CG31445
pzg
ppl
Cpr78Cb
Cpr78Ca
CG12974
AcCoAS
RapGAP1
nxf4
CG43290
CG31496
ScpX
CG33120
CG31752
CG17597
CG17321
CG10600
shep
ssp6
CG6610
CG13295
CG13293
CG4991
CG16700
RtcB
Rab9
Inx2
Sox21a
TTLL4A
SCAR
piwi
CG12253
ATPsynG
mud
mRNA-cap
Fbxl4
CG32599
CG1434
CG43271
inv
CG10562
CG10560
CG10553
CG31436
CG31099
CG31087
CG10559
CG10550
UGP
PGRP-LF
Pdxk
mRRF1
CG34456
CG32040
CG32039
sigmar
Sesn
l(2)dtl
CG5504
CG46429
CG18128
Alg3
RpIIIC53