<?xml version="1.0" encoding="UTF-8"?> <pml xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="pml.xsd"> <source uid="HapMap" id="1" db="HapMap" name="Albert Vernon Smith" /> <panel id="3" lsid="urn:lsid:dcc.hapmap.org:Panel:CEPH-30-trios:1" size="90"> <annotation name="description" value="Collection of 90 individuals from the CEPH pedigrees, with ancestry from Northern and Western Europe."/> <taxon id="100" scientific_name="Homo sapiens"> <db_xref db="Unified Taxonomy Database" id="9606" uid="9606"/> </taxon> </panel> <molecular_sample molecule="Genomic" id="4"> <panel id="3" /> <polymorphism_assay id="5" /> </molecular_sample> <assayed_genomic_genotype id="6"> <genomic_allele id="7" sequence="A" /> <genomic_allele id="8" sequence="T" /> <polymorphism_assay id="5" /> <molecular_sample id="4" /> </assayed_genomic_genotype> <genomic_polymorphism flank_down="gccaaaagaa ctttttcaga gagaagaaaa attatatagt ttaaaaactt ggactatgt" flank_up="aacaaaggaa gagtgttaga gaataaataa atgagagtta aaagaaaacc tattattttt ctgatttcta gttgatttaa" id="9" lsid="urn:LSID:ncbi.nlm.nih.gov:dbSNP;refSNP:rs7349348:116.2"> <db_xref db="dbSNP" uid="rs7349348" url="http://www.ncbi.nih.gov/SNP/snp_ref.cgi?rs=rs7349348" /> </genomic_polymorphism> <reference_genomic_location_in_assembly start="51572795" end="51572795" strand="1" chromosome_name="2"> <reference_genomic_assembly name="NCBI Build" version="35.1" /> </reference_genomic_location_in_assembly> <reference_genomic_location start="30477077" end="30477077" strand="1"> <reference_genomic_landmark> <db_xref db="RefSeq" uid="NT_022184.14" field="version" /> </reference_genomic_landmark> </reference_genomic_location> <genomic_allele id="7" sequence="A" /> <genomic_allele id="8" sequence="T" /> <polymorphism_assay id="102" lsid="urn:LSID:mcgill-gqic.hapmap.org:Assay:555464:1" description="BeadArray Platform"/> <genomic_allele_population_frequency value="0.65" count="60" > <db_xref db="HapMap" url="http://www.hapmap.org/cgi-perl/snp_details?name=rs7349348" uid="" /> <panel id="3" /> <genomic_allele id="7"/> </genomic_allele_population_frequency> </pml>