GenLibi
2023/06/29HTTPS Site: https://dbarchive.biosciencedbc.jp/data/genlibi/
GenLibi (Gene Linker to bibliography) provides information on genes and their related diseases and phenotypes that were obtained from the JST bibliographic information JDream II.
README Content
1. Database Component
2. Data Description
2.1 README
| Data name | README |
| Description of data contents | HTML file to describe "GenLibi" data. |
| File | README_e.html(English) |
2.2 Main
| Data name | Main |
| Description of data contents | Information of gene functions and their related diseases and phenotypes that were obtained from the JST bibliographic information. |
| File | genlibi_en.zip (12 KB) |
| Data item | Description |
|---|---|
| Gene ID | ID of the gene |
| Gene Symbol | Symbol of the gene |
| Gene Name | Name of the gene |
| Organism | Organism of the gene |
| Phenotype from JST bibliography | Names of the diseases or the phenotypes that were extracted from the articles related to the gene |
| MeSH Tree | MeSH trees of the MeSH terms that are corresponding to the diseases or the phenotypes |
| JST bibliography database | IDs of the articles provided from the JST bibliographic information system (JDream II) |
3. License
You may use this database in compliance with the terms and conditions of the license described below. The license specifies the license terms regarding the use of this database and the requirements you must follow in using this database.
The license for this database is specified in the Creative Commons Attribution-Share Alike 2.1 Japan.
If you use data from this database, please be sure attribute this database as follows: "GenLibi © Japan Science and Technology Agency licensed under CC Attribution-Share Alike 2.1 Japan".
The summary of the Creative Commons Attribution-Share Alike 2.1 Japan is found here.
With regard to this database, you are licensed to:
- freely access part or whole of this database, and acquire data;
- freely redistribute part or whole of the data from this database; and
- freely create and distribute database and other derivative works based on part or whole of the data from this database,
under the license, as long as you comply with the following conditions:
- You must attribute this database in the manner specified by the author or licensor when distributing part or whole of this database or any derivative work.
- You must distribute any derivative work based on part or whole of the data from this database under the license.
- You need to contact the Licensor shown below to request a license for use of this database or any part thereof not licensed under the license.
4. Update History
| Date | Update contents |
|---|---|
| 2014/03/25 | GenLibi English archive site is opened. |
| 2007/03/01 | GenLibi (http://gene.biosciencedbc.jp/) is opened. |