NCig10065.R1 exon 400189 NCig10065.R1 extracted 3036673 NCig10065.R1 filtered_for_artefacts 2898637 NCig10065.R1 filtered_for_rrna 2505111 NCig10065.R1 genome_mapped 2440161 NCig10065.R1 intergenic 892753 NCig10065.R1 promoter 220600 NCig10065.R1 properly_mapped 2242071 NCig10065.R1 raw 3965350 NCig10065.R1 removed_artefacts 138036 NCig10065.R1 removed_by_alignment 64950 NCig10065.R1 removed_by_extraction 928677 NCig10065.R1 removed_duplicates 781002 NCig10065.R1 removed_improper_pairs 582912 NCig10065.R1 removed_rrna 393526 NCig10065.R1 total_CAGEscan_pairs 1513542 NCig10065.R1 uniquely_mapped 1659159