NCig10061.R1 exon 819425 NCig10061.R1 extracted 8474968 NCig10061.R1 filtered_for_artefacts 8343879 NCig10061.R1 filtered_for_rrna 5781205 NCig10061.R1 genome_mapped 5602989 NCig10061.R1 intergenic 1573041 NCig10061.R1 promoter 774916 NCig10061.R1 properly_mapped 5248052 NCig10061.R1 raw 9344079 NCig10061.R1 removed_artefacts 131089 NCig10061.R1 removed_by_alignment 178216 NCig10061.R1 removed_by_extraction 869111 NCig10061.R1 removed_duplicates 2103066 NCig10061.R1 removed_improper_pairs 1748129 NCig10061.R1 removed_rrna 2562674 NCig10061.R1 total_CAGEscan_pairs 3167382 NCig10061.R1 uniquely_mapped 3499923