NCig10052.R1 exon 294922 NCig10052.R1 extracted 3341009 NCig10052.R1 filtered_for_artefacts 3287581 NCig10052.R1 filtered_for_rrna 2896894 NCig10052.R1 genome_mapped 2810622 NCig10052.R1 intergenic 739794 NCig10052.R1 promoter 244001 NCig10052.R1 properly_mapped 2622243 NCig10052.R1 raw 4388468 NCig10052.R1 removed_artefacts 53428 NCig10052.R1 removed_by_alignment 86272 NCig10052.R1 removed_by_extraction 1047459 NCig10052.R1 removed_duplicates 1408276 NCig10052.R1 removed_improper_pairs 1219897 NCig10052.R1 removed_rrna 390687 NCig10052.R1 total_CAGEscan_pairs 1278717 NCig10052.R1 uniquely_mapped 1402346