NCig10039.R1 exon 547431 NCig10039.R1 extracted 4980463 NCig10039.R1 filtered_for_artefacts 4812630 NCig10039.R1 filtered_for_rrna 2730749 NCig10039.R1 genome_mapped 2622706 NCig10039.R1 intergenic 363853 NCig10039.R1 promoter 346774 NCig10039.R1 properly_mapped 2462431 NCig10039.R1 raw 5865574 NCig10039.R1 removed_artefacts 167833 NCig10039.R1 removed_by_alignment 108043 NCig10039.R1 removed_by_extraction 885111 NCig10039.R1 removed_duplicates 1240404 NCig10039.R1 removed_improper_pairs 1080129 NCig10039.R1 removed_rrna 2081881 NCig10039.R1 total_CAGEscan_pairs 1258058 NCig10039.R1 uniquely_mapped 1382302