NCig10036.R1 exon 729525 NCig10036.R1 extracted 5707573 NCig10036.R1 filtered_for_artefacts 5657862 NCig10036.R1 filtered_for_rrna 4405901 NCig10036.R1 genome_mapped 4307939 NCig10036.R1 intergenic 1620164 NCig10036.R1 promoter 330395 NCig10036.R1 properly_mapped 4089647 NCig10036.R1 raw 6753026 NCig10036.R1 removed_artefacts 49711 NCig10036.R1 removed_by_alignment 97962 NCig10036.R1 removed_by_extraction 1045453 NCig10036.R1 removed_duplicates 1391657 NCig10036.R1 removed_improper_pairs 1173365 NCig10036.R1 removed_rrna 1251961 NCig10036.R1 total_CAGEscan_pairs 2680084 NCig10036.R1 uniquely_mapped 2916282