NCig10016.R1 exon 575393 NCig10016.R1 extracted 12043479 NCig10016.R1 filtered_for_artefacts 11986816 NCig10016.R1 filtered_for_rrna 3158349 NCig10016.R1 genome_mapped 2929099 NCig10016.R1 intergenic 913618 NCig10016.R1 promoter 321059 NCig10016.R1 properly_mapped 2751478 NCig10016.R1 raw 12778881 NCig10016.R1 removed_artefacts 56663 NCig10016.R1 removed_by_alignment 229250 NCig10016.R1 removed_by_extraction 735402 NCig10016.R1 removed_duplicates 939542 NCig10016.R1 removed_improper_pairs 761921 NCig10016.R1 removed_rrna 8828467 NCig10016.R1 total_CAGEscan_pairs 1810070 NCig10016.R1 uniquely_mapped 1989557