BAMK@HD VN:1.0 SO:coordinate @SQ SN:chr1 LN:249250621 @SQ SN:chr10 LN:135534747 @SQ SN:chr11 LN:135006516 @SQ SN:chr12 LN:133851895 @SQ SN:chr13 LN:115169878 @SQ SN:chr14 LN:107349540 @SQ SN:chr15 LN:102531392 @SQ SN:chr16 LN:90354753 @SQ SN:chr17 LN:81195210 @SQ SN:chr18 LN:78077248 @SQ SN:chr19 LN:59128983 @SQ SN:chr2 LN:243199373 @SQ SN:chr20 LN:63025520 @SQ SN:chr21 LN:48129895 @SQ SN:chr22 LN:51304566 @SQ SN:chr3 LN:198022430 @SQ SN:chr4 LN:191154276 @SQ SN:chr5 LN:180915260 @SQ SN:chr6 LN:171115067 @SQ SN:chr7 LN:159138663 @SQ SN:chr8 LN:146364022 @SQ SN:chr9 LN:141213431 @SQ SN:chrM LN:16571 @SQ SN:chrX LN:155270560 @PG ID:TopHat VN:2.0.8 CL:/home/nbertin/bin/tophat --microexon-search --no-novel-juncs --b2-sensitive --min-intron-length 15 --output-dir /tmp/nbertin/F5_RNASeq_Mapping/RDhi10052//tophat2/ --library-type fr-secondstrand --num-threads 10 --raw-juncs /tmp/RNASeq_Tuxedo3_Cufflink2_Mapping/F5_RNASeq_Mapping_Refs/female//junctions.juncs /tmp/RNASeq_Tuxedo3_Cufflink2_Mapping/F5_RNASeq_Mapping_Refs/female//genome /tmp/nbertin/F5_RNASeq_Mapping/RDhi10052//fastq//RDhi10052.fq chr1=Cchr10chr114 chr12jchr13VZchr14$fchr15@chr16Abchr17chr18@]chr19<chr2~chr20pchr21ggchr22vchr3 chr4dd chr5< chr6;3 chr7gC| chr8vVchr9jchrM@chrX=A