Match to: gi|28523341 Score: 181 RIKEN cDNA 9530020G05 [Mus musculus] Found in search of C:\Xcalibur\sequest\061_A080604_10.txt Nominal mass (Mr): 83421; Calculated pI value: 6.20 NCBI BLAST search of gi|28523341 against nr Unformatted sequence string for pasting into other applications Taxonomy: Mus musculus Links to retrieve other entries containing this sequence from NCBI Entrez: gi|32967629 from Mus musculus Variable modifications: Acetyl (N-term),Oxidation (M),Propionamide (C),Sulphone (M) Cleavage by Trypsin: cuts C-term side of KR unless next residue is P Sequence Coverage: 7% Matched peptides shown in Bold Red 1 MAEAVERTDE LVREYLLFRG FTHTLRQLDA EIKADKEKGF RVDKIVDQLQ 51 QLMQVYDLAA LRDYWSYLER RLFSRLEDIY RPTINKLKTS LFRFYLVYTI 101 QTNRNDKAQE FFAKQATELQ NQAEWKDWFV LPFLPSPDTN PTFATYFSRQ 151 WADTFIISLH NFLSVLFQCM PVPVILNFDA ECQRTNQVQE ENEVLRQKLF 201 ALQAEIHRLK KEEQQQEEEA AALVQHKLPP YVSSMDRLGD SELALVCSQR 251 PASLSQSPRV GFLSSLLPQS KKSPSRLSPA QGPPQAQSSA KKDSFSSQAT 301 KGKDSVPGAK DGKSLLSGPV PGEASWTHQR QRRLQDHGKE RRELLSTSSS 351 QSQCAERKPE VSGAEAEPCL ELHMGPVEVL ARVSTAGSEG DRPEQPFIVL 401 SQEEYGEHHS SIMHCRVDCS GRRVASLDVD GVIKVWSFNP IMQTKASSIS 451 KSPLLSLEWA TKRDRLLLLG SGVGTVRLYD TEAKKNLCEI NINDDMPRIL 501 SLACSPNGAS FVCSAAAPSL TSQTDSSAPD IGSKGMNQVP GKLLLWDTKT 551 MKQQLQFSLD PEPIAINCTA FNHNGNLLVT GAADGVIRLF DMQQHECAMS 601 WKAHCGEVYS VEFSCDENAV YSIGEDRKFI QWNIHKSGLK VSESNLPSDA 651 TGPFVLSGYS GYKQVQVPRG RLFAFDSEGN YMLTCSATGG LIYKLGSEEK 701 VLENCLSLGG HRAPVVTVDW STAMDCGTCL TASMDGKIKL TTLLAHKL
Residue Number Increasing Mass Decreasing Mass
Start - End Observed Mr(expt) Mr(calc) Delta Miss Sequence 277 - 291 734.45 1466.89 1466.61 0.27 0 LSPAQGPPQAQSSAK (Ions score 62) 314 - 330 911.90 1821.78 1822.01 -0.23 0 SLLSGPVPGEASWTHQR (Ions score 85) 641 - 663 1188.71 2375.41 2375.57 -0.17 0 VSESNLPSDATGPFVLSGYSGYK (Ions score 35) LOCUS XP_145240 748 aa linear ROD 30-OCT-2003 DEFINITION RIKEN cDNA 9530020G05 [Mus musculus]. ACCESSION XP_145240 VERSION XP_145240.4 GI:28523341 DBSOURCE REFSEQ: accession XM_145240.5 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from an annotated genomic sequence (NT_039341) using gene prediction method: GNOMON, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 24, 2003 this sequence version replaced gi:25093575. FEATURES Location/Qualifiers source 1..748 /organism="Mus musculus" /strain="C57BL/6J" /db_xref="taxon:10090" /chromosome="6" Protein 1..748 /product="RIKEN cDNA 9530020G05" Region 408..740 /region_name="FOG: WD40 repeat [General function prediction only]" /note="COG2319" /db_xref="CDD:COG2319" Region 409..644 /region_name="FOG: WD40 repeat [General function prediction only]" /note="COG2319" /db_xref="CDD:COG2319" Region 514..678 /region_name="FOG: WD40-like repeat [Function unknown]" /note="COG1520" /db_xref="CDD:COG1520" Region 554..591 /region_name="WD domain, G-beta repeat" /note="WD40" /db_xref="CDD:pfam00400" Region 565..591 /region_name="WD40 repeats" /note="WD40" /db_xref="CDD:smart00320" CDS 1..748 /gene="9530020G05Rik" /coded_by="XM_145240.5:24..2270" /db_xref="GeneID:101240" /db_xref="LocusID:101240" /db_xref="MGI:2141558"