Mascot Search Results

Protein View

Match to: gi|24429590 Score: 137
DEAH (Asp-Glu-Ala-His) box polypeptide 9; D-E-A-D (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD (aspartate-glutamate-alanine-aspartate) box p
Found in search of C:\Xcalibur\sequest\059_B071604_34.txt

Nominal mass (Mr): 149583; Calculated pI value: 6.48
NCBI BLAST search of gi|24429590 against nr
Unformatted sequence string for pasting into other applications

Taxonomy: Mus musculus
Links to retrieve other entries containing this sequence from NCBI Entrez:
gi|3913434 from Mus musculus
gi|2961456 from Mus musculus

Variable modifications: Acetyl (N-term),Oxidation (M),Propionamide (C),Sulphone (M)
Cleavage by Trypsin: cuts C-term side of KR unless next residue is P
Sequence Coverage: 2%

Matched peptides shown in Bold Red

     1 MGDIKNFLYA WCGKRKMTPA YEIRAVGNKN RQKFMCEVRV EGFNYRGMGN 
    51 STNKKDAQSN AARDFVNYLV RINEVKSEEV PAVGIVPPPP ILSDTSDSTA 
   101 SAAEGLPAPM GGPLPPHLAL KAEENNSGVE SSGYGAPGPT WDRGANLKDY 
   151 YSRKEEQEVQ ATLESEEVDL NAGLHGNWTL ENAKARLNHY FQKEKIQGEY 
   201 KYTQVGPDHN RSFIAEMTIY IKQLGRRIFA REHGCNKKLA AQSCALSLVR 
   251 QLYHLGCIEA YSGLTKKKEG ERVEPYKVFL PPDLELQLQN VVQELDLEIV 
   301 PPPVDPSMPV ILNIGKLAHF EPSQRQNAVG VVPWSPPQSN WNPWTSSNID 
   351 EGPLAYASTE QISMDLKNEL TYQMEQDHNL QSVLQERELL PVKKFEAEIL 
   401 EAISSNSVVI IRGATGCGKT TQVPQYILDD FIQNDRAAEC NIVVTQPRRI 
   451 SAVAVAERVA YERGEEPGKS CGYSVRFESI LPRPHASIMF CTVGVLLRKL 
   501 EAGIRGISHV IVDEIHERDI NTDFLLVVLR DVVLAYPEVR IVLMSATIDT 
   551 TMFCEYFFNC PIIEVYGRTF PVQEYFLEDC IQMTQFIPPP KDKKKKDKED 
   601 DGGEDDDANC NLICGDEYGP ETKLSMSQLN EKETPFELIE ALLKYIETLN 
   651 VPGAVLVFLP GWNLIYTMQK HLENNSHFGS HRYQILPLHS QIPREEQRKV 
   701 FDPVPDGVTK VILSTNIAET SITINDVVYV IDSCKQKVKL FTAHNNMTNY 
   751 ATVWASKTNL EQRKGRAGRV RPGFCFHLCS RARFDRLETH MTPEMFRTPL 
   801 HEIALSIKLL RLGGIGQFLA KAIEPPPLDA IIEAEHTLRE LDALDANDEL 
   851 TPLGRILAKL PIEPRFGKMM IMGCIFYVGD AVCTISAATC FPEPFISEGK 
   901 RLGYIHRNFA GNRFSDHVAL LSVFQAWDDA RMSGEEAEIR FCEQKRLNMA 
   951 TLRMTWEAKV QLKEILINSG FPEDCLLTQV FTNTGPDNNL DVVISLLAFG 
  1001 VYPNVCYHKE KRKILTTEGR NALIHKSSVN CPFSSQDMKY PSPFFVFGEK 
  1051 IRTRAISAKG MTLVTPLQLL LFASKKVQSD GQIVFIDDWI RLQISHEAAA 
  1101 CITIRAAMEA LVVEVSKQPN IISQLDPVNE HMLNTIRQIS RPSAAGINLM 
  1151 IGSVRYGDGP RPPKMARYDN GSGYRRGYGG GGYGGGGYGG GYGSGGFGGG 
  1201 FGSGGGFGGG FNSGGGGFGS GGGGFGSGGG GFGGGGGGFS GGGGGGFGGG 
  1251 RGGGGGGFGG SGGFGNGGGG YGVGGGGYGG GGGGGYGGGS GGYGGGGYGG 
  1301 GEGYSISPNS YRGNYGGGGG GYRGGSQGGY RNNFGGDYRG SSGDYRGSGG 
  1351 GYRGSGGFQR RGYGGGYFGQ GRGGGGGGGY 

  Residue Number  Increasing Mass  Decreasing Mass 

 Start - End   Observed  Mr(expt) Mr(calc)   Delta   Miss Sequence
   317 - 325     543.35  1084.68  1084.20     0.48     0  LAHFEPSQR  (Ions score 26)
   798 - 808     611.66  1221.30  1221.46    -0.16     0  TPLHEIALSIK  (Ions score 63)
  1040 - 1050    659.71  1317.40  1317.51    -0.11     0  YPSPFFVFGEK  (Ions score 50)

Error Distribution


LOCUS NP_031868 1380 aa linear ROD 18-FEB-2004 DEFINITION DEAH (Asp-Glu-Ala-His) box polypeptide 9; D-E-A-D (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 9; leukophysin; RNA helicase; nuclear DNA helicase II [Mus musculus]. ACCESSION NP_031868 VERSION NP_031868.1 GI:24429590 DBSOURCE REFSEQ: accession NM_007842.1 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Rodentia; Sciurognathi; Muridae; Murinae; Mus. REFERENCE 1 (residues 1 to 1380) AUTHORS Lee,C.G., Eki,T., Okumura,K., da Costa Soares,V. and Hurwitz,J. TITLE Molecular analysis of the cDNA and genomic DNA encoding mouse RNA helicase A JOURNAL Genomics 47 (3), 365-371 (1998) PUBMED 9480750 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from U91922.1. FEATURES Location/Qualifiers source 1..1380 /organism="Mus musculus" /strain="129/Sv" /db_xref="taxon:10090" /chromosome="1" /map="1 77.0 cM" Protein 1..1380 /product="DEAH (Asp-Glu-Ala-His) box polypeptide 9" /note="D-E-A-D (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 9; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 9; leukophysin; RNA helicase; nuclear DNA helicase II" Region 3..1170 /region_name="Dosage compensation complex, subunit MLE [Transcription]" /note="KOG0921" /db_xref="CDD:18714" Region 5..69 /region_name="Double-stranded RNA binding motif" /note="DSRM" /db_xref="CDD:24260" Region 183..253 /region_name="Double-stranded RNA binding motif" /note="DSRM" /db_xref="CDD:24260" Region 384..575 /region_name="DEAD-like helicases superfamily" /note="DEXDc" /db_xref="CDD:24291" Region 677..770 /region_name="helicase superfamily c-terminal domain" /note="HELICc" /db_xref="CDD:24292" Region 833..922 /region_name="Helicase associated domain (HA2)" /note="HA2" /db_xref="CDD:26244" CDS 1..1380 /gene="Dhx9" /coded_by="NM_007842.1:108..4250" /note="go_component: intracellular [goid 0005622] [evidence IEA]; go_component: nucleus [goid 0005634] [evidence IEA]; go_function: DNA binding [goid 0003677] [evidence IEA]; go_function: nucleic acid binding [goid 0003676] [evidence IEA]; go_function: RNA binding [goid 0003723] [evidence IEA]; go_function: double-stranded RNA binding [goid 0003725] [evidence IEA]; go_function: helicase activity [goid 0004386] [evidence IEA]; go_function: ATP binding [goid 0005524] [evidence IEA]; go_function: ATP dependent helicase activity [goid 0008026] [evidence IEA]; go_function: RNA helicase activity [goid 0003724] [evidence IEA]" /db_xref="GeneID:13211" /db_xref="LocusID:13211" /db_xref="MGI:108177"

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