ClEST

2012/05/22

HTTPS Site: https://dbarchive.biosciencedbc.jp/data/clest/

Expressed sequence tags (EST) database of unique organs and whole bodies of the bedbug.

README Content

Database Component
Data Description
License
Update History
Literature
Contact address

1. Database Component

README
Clone
Cluster

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2. Data Description

2.1 README

Data name	README
Description of data contents	HTML file to describe "ClEST" data.
File	README_e.html(English)

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2.2 Clone

Data name	Clone
Description of data contents	Infomarion of clones of each Cimex lectularius EST library
File	clest_clone.zip (660 KB)

Data items are the following:

Data item	Description
Clone ID	ID of the clone
Library	Tissue used for library construction
Category	Category of affiliation of sequence
Cluster	ID of cluster to which the clone belongs
ACC No. of clone	Accession number of the clone in GenBank
Length	Sequence length of the clone
Sequence	Sequence

2.3 Cluster

Data name	Cluster
Description of data contents	Information of clustered sequences including Blastx search results and GO annotations
File	clest_cluster.zip (525 KB)

Data items are the following:

Data item	Description
Cluster ID	ID of the cluster
Description	Description of presumed function of the cluster
Category	Category of affiliation of the cluster
Length	Consensus sequence length of the cluster
Sequence	Consensus sequence
Source	Source clones
No. of clones	Number of source clones
Top Blastx hit (E value < 1e-6)	Gene name of top Blastx hit
ACC No.	Accession number of top Blastx hit
E-value	E-value of top Blastx hit
GO	GO annotation

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3. License

Last updated : 2012/05/22

You may use this database in compliance with the terms and conditions of the license described below. The license specifies the license terms regarding the use of this database and the requirements you must follow in using this database.

The license for this database is specified in the Creative Commons Attribution-Share Alike 2.1 Japan.
If you use data from this database, please be sure attribute this database as follows: "ClEST © Minoru Moriyama (AIST) licensed under CC Attribution-Share Alike 2.1 Japan".

The summary of the Creative Commons Attribution-Share Alike 2.1 Japan is found here.

With regard to this database, you are licensed to:

freely access part or whole of this database, and acquire data;
freely redistribute part or whole of the data from this database; and
freely create and distribute database and other derivative works based on part or whole of the data from this database,

under the license, as long as you comply with the following conditions:

You must attribute this database in the manner specified by the author or licensor when distributing part or whole of this database or any derivative work.
You must distribute any derivative work based on part or whole of the data from this database under the license.
You need to contact the Licensor shown below to request a license for use of this database or any part thereof not licensed under the license.

Symbiotic Evolution and Biological Functions Research Group, Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST)
AIST Tsukuba Central 6, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8566 Japan
E-mail: m-moriyama[at]aist[dot]go[dot]jp

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4. Update History

Date	Update contents
2012/05/22	ClEST english archive site is opened.

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5. Literature

Minoru Moriyama, Ryuichi Koga, Takahiro Hosokawa, Naruo Nikoh, Ryo Futahashi, Takema Fukatsu.
Comparative transcriptomics of the bacteriome and spermalege of the bedbug Cimex lectularius (Hemiptera: Cimicidae)

6. Contact address

When you have any question about "ClEST", contact the following:

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