Job ID = 7116936 SRX = SRX8639492 Genome = sacCer3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-07-22T06:21:39 prefetch.2.10.7: 1) Downloading 'SRR12117056'... 2020-07-22T06:21:39 prefetch.2.10.7: Downloading via HTTPS... 2020-07-22T06:27:52 prefetch.2.10.7: HTTPS download succeed 2020-07-22T06:27:52 prefetch.2.10.7: 1) 'SRR12117056' was downloaded successfully 2020-07-22T06:27:52 prefetch.2.10.7: 'SRR12117056' has 0 unresolved dependencies Read 37028048 spots for SRR12117056/SRR12117056.sra Written 37028048 spots for SRR12117056/SRR12117056.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:21:31 37028048 reads; of these: 37028048 (100.00%) were paired; of these: 4560779 (12.32%) aligned concordantly 0 times 28148366 (76.02%) aligned concordantly exactly 1 time 4318903 (11.66%) aligned concordantly >1 times ---- 4560779 pairs aligned concordantly 0 times; of these: 364005 (7.98%) aligned discordantly 1 time ---- 4196774 pairs aligned 0 times concordantly or discordantly; of these: 8393548 mates make up the pairs; of these: 7798749 (92.91%) aligned 0 times 396617 (4.73%) aligned exactly 1 time 198182 (2.36%) aligned >1 times 89.47% overall alignment rate Time searching: 00:21:31 Overall time: 00:21:31 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 999937 / 32619848 = 0.0307 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 22 Jul 2020 16:07:07: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 22 Jul 2020 16:07:07: #1 read tag files... INFO @ Wed, 22 Jul 2020 16:07:07: #1 read treatment tags... INFO @ Wed, 22 Jul 2020 16:07:12: 1000000 INFO @ Wed, 22 Jul 2020 16:07:17: 2000000 INFO @ Wed, 22 Jul 2020 16:07:22: 3000000 INFO @ Wed, 22 Jul 2020 16:07:28: 4000000 INFO @ Wed, 22 Jul 2020 16:07:33: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 22 Jul 2020 16:07:37: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 22 Jul 2020 16:07:37: #1 read tag files... INFO @ Wed, 22 Jul 2020 16:07:37: #1 read treatment tags... INFO @ Wed, 22 Jul 2020 16:07:38: 6000000 INFO @ Wed, 22 Jul 2020 16:07:42: 1000000 INFO @ Wed, 22 Jul 2020 16:07:43: 7000000 INFO @ Wed, 22 Jul 2020 16:07:48: 2000000 INFO @ Wed, 22 Jul 2020 16:07:49: 8000000 INFO @ Wed, 22 Jul 2020 16:07:54: 3000000 INFO @ Wed, 22 Jul 2020 16:07:54: 9000000 INFO @ Wed, 22 Jul 2020 16:07:59: 4000000 INFO @ Wed, 22 Jul 2020 16:08:00: 10000000 INFO @ Wed, 22 Jul 2020 16:08:05: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 22 Jul 2020 16:08:06: 11000000 INFO @ Wed, 22 Jul 2020 16:08:07: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 22 Jul 2020 16:08:07: #1 read tag files... INFO @ Wed, 22 Jul 2020 16:08:07: #1 read treatment tags... INFO @ Wed, 22 Jul 2020 16:08:10: 6000000 INFO @ Wed, 22 Jul 2020 16:08:11: 12000000 INFO @ Wed, 22 Jul 2020 16:08:13: 1000000 INFO @ Wed, 22 Jul 2020 16:08:16: 7000000 INFO @ Wed, 22 Jul 2020 16:08:17: 13000000 INFO @ Wed, 22 Jul 2020 16:08:18: 2000000 INFO @ Wed, 22 Jul 2020 16:08:21: 8000000 INFO @ Wed, 22 Jul 2020 16:08:22: 14000000 INFO @ Wed, 22 Jul 2020 16:08:24: 3000000 INFO @ Wed, 22 Jul 2020 16:08:27: 9000000 INFO @ Wed, 22 Jul 2020 16:08:28: 15000000 INFO @ Wed, 22 Jul 2020 16:08:30: 4000000 INFO @ Wed, 22 Jul 2020 16:08:32: 10000000 INFO @ Wed, 22 Jul 2020 16:08:34: 16000000 INFO @ Wed, 22 Jul 2020 16:08:35: 5000000 INFO @ Wed, 22 Jul 2020 16:08:38: 11000000 INFO @ Wed, 22 Jul 2020 16:08:39: 17000000 INFO @ Wed, 22 Jul 2020 16:08:41: 6000000 INFO @ Wed, 22 Jul 2020 16:08:44: 12000000 INFO @ Wed, 22 Jul 2020 16:08:45: 18000000 INFO @ Wed, 22 Jul 2020 16:08:46: 7000000 INFO @ Wed, 22 Jul 2020 16:08:49: 13000000 INFO @ Wed, 22 Jul 2020 16:08:50: 19000000 INFO @ Wed, 22 Jul 2020 16:08:52: 8000000 INFO @ Wed, 22 Jul 2020 16:08:55: 14000000 INFO @ Wed, 22 Jul 2020 16:08:56: 20000000 INFO @ Wed, 22 Jul 2020 16:08:58: 9000000 INFO @ Wed, 22 Jul 2020 16:09:00: 15000000 INFO @ Wed, 22 Jul 2020 16:09:02: 21000000 INFO @ Wed, 22 Jul 2020 16:09:03: 10000000 INFO @ Wed, 22 Jul 2020 16:09:06: 16000000 INFO @ Wed, 22 Jul 2020 16:09:07: 22000000 INFO @ Wed, 22 Jul 2020 16:09:09: 11000000 INFO @ Wed, 22 Jul 2020 16:09:12: 17000000 INFO @ Wed, 22 Jul 2020 16:09:13: 23000000 INFO @ Wed, 22 Jul 2020 16:09:15: 12000000 INFO @ Wed, 22 Jul 2020 16:09:17: 18000000 INFO @ Wed, 22 Jul 2020 16:09:19: 24000000 INFO @ Wed, 22 Jul 2020 16:09:20: 13000000 INFO @ Wed, 22 Jul 2020 16:09:23: 19000000 INFO @ Wed, 22 Jul 2020 16:09:24: 25000000 INFO @ Wed, 22 Jul 2020 16:09:26: 14000000 INFO @ Wed, 22 Jul 2020 16:09:28: 20000000 INFO @ Wed, 22 Jul 2020 16:09:30: 26000000 INFO @ Wed, 22 Jul 2020 16:09:32: 15000000 INFO @ Wed, 22 Jul 2020 16:09:34: 21000000 INFO @ Wed, 22 Jul 2020 16:09:36: 27000000 INFO @ Wed, 22 Jul 2020 16:09:37: 16000000 INFO @ Wed, 22 Jul 2020 16:09:40: 22000000 INFO @ Wed, 22 Jul 2020 16:09:41: 28000000 INFO @ Wed, 22 Jul 2020 16:09:43: 17000000 INFO @ Wed, 22 Jul 2020 16:09:45: 23000000 INFO @ Wed, 22 Jul 2020 16:09:47: 29000000 INFO @ Wed, 22 Jul 2020 16:09:49: 18000000 INFO @ Wed, 22 Jul 2020 16:09:51: 24000000 INFO @ Wed, 22 Jul 2020 16:09:53: 30000000 INFO @ Wed, 22 Jul 2020 16:09:54: 19000000 INFO @ Wed, 22 Jul 2020 16:09:56: 25000000 INFO @ Wed, 22 Jul 2020 16:09:58: 31000000 INFO @ Wed, 22 Jul 2020 16:10:00: 20000000 INFO @ Wed, 22 Jul 2020 16:10:02: 26000000 INFO @ Wed, 22 Jul 2020 16:10:04: 32000000 INFO @ Wed, 22 Jul 2020 16:10:06: 21000000 INFO @ Wed, 22 Jul 2020 16:10:08: 27000000 INFO @ Wed, 22 Jul 2020 16:10:10: 33000000 INFO @ Wed, 22 Jul 2020 16:10:11: 22000000 INFO @ Wed, 22 Jul 2020 16:10:13: 28000000 INFO @ Wed, 22 Jul 2020 16:10:15: 34000000 INFO @ Wed, 22 Jul 2020 16:10:17: 23000000 INFO @ Wed, 22 Jul 2020 16:10:19: 29000000 INFO @ Wed, 22 Jul 2020 16:10:21: 35000000 INFO @ Wed, 22 Jul 2020 16:10:23: 24000000 INFO @ Wed, 22 Jul 2020 16:10:25: 30000000 INFO @ Wed, 22 Jul 2020 16:10:27: 36000000 INFO @ Wed, 22 Jul 2020 16:10:28: 25000000 INFO @ Wed, 22 Jul 2020 16:10:30: 31000000 INFO @ Wed, 22 Jul 2020 16:10:32: 37000000 INFO @ Wed, 22 Jul 2020 16:10:34: 26000000 INFO @ Wed, 22 Jul 2020 16:10:36: 32000000 INFO @ Wed, 22 Jul 2020 16:10:38: 38000000 INFO @ Wed, 22 Jul 2020 16:10:40: 27000000 INFO @ Wed, 22 Jul 2020 16:10:41: 33000000 INFO @ Wed, 22 Jul 2020 16:10:44: 39000000 INFO @ Wed, 22 Jul 2020 16:10:45: 28000000 INFO @ Wed, 22 Jul 2020 16:10:47: 34000000 INFO @ Wed, 22 Jul 2020 16:10:49: 40000000 INFO @ Wed, 22 Jul 2020 16:10:51: 29000000 INFO @ Wed, 22 Jul 2020 16:10:53: 35000000 INFO @ Wed, 22 Jul 2020 16:10:55: 41000000 INFO @ Wed, 22 Jul 2020 16:10:57: 30000000 INFO @ Wed, 22 Jul 2020 16:10:58: 36000000 INFO @ Wed, 22 Jul 2020 16:11:01: 42000000 INFO @ Wed, 22 Jul 2020 16:11:02: 31000000 INFO @ Wed, 22 Jul 2020 16:11:04: 37000000 INFO @ Wed, 22 Jul 2020 16:11:06: 43000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 22 Jul 2020 16:11:08: 32000000 INFO @ Wed, 22 Jul 2020 16:11:10: 38000000 INFO @ Wed, 22 Jul 2020 16:11:12: 44000000 INFO @ Wed, 22 Jul 2020 16:11:13: 33000000 INFO @ Wed, 22 Jul 2020 16:11:15: 39000000 INFO @ Wed, 22 Jul 2020 16:11:18: 45000000 INFO @ Wed, 22 Jul 2020 16:11:19: 34000000 INFO @ Wed, 22 Jul 2020 16:11:21: 40000000 INFO @ Wed, 22 Jul 2020 16:11:23: 46000000 INFO @ Wed, 22 Jul 2020 16:11:25: 35000000 BigWig に変換しました。 INFO @ Wed, 22 Jul 2020 16:11:26: 41000000 INFO @ Wed, 22 Jul 2020 16:11:29: 47000000 INFO @ Wed, 22 Jul 2020 16:11:30: 36000000 INFO @ Wed, 22 Jul 2020 16:11:32: 42000000 INFO @ Wed, 22 Jul 2020 16:11:35: 48000000 INFO @ Wed, 22 Jul 2020 16:11:36: 37000000 INFO @ Wed, 22 Jul 2020 16:11:38: 43000000 INFO @ Wed, 22 Jul 2020 16:11:40: 49000000 INFO @ Wed, 22 Jul 2020 16:11:42: 38000000 INFO @ Wed, 22 Jul 2020 16:11:43: 44000000 INFO @ Wed, 22 Jul 2020 16:11:46: 50000000 INFO @ Wed, 22 Jul 2020 16:11:47: 39000000 INFO @ Wed, 22 Jul 2020 16:11:49: 45000000 INFO @ Wed, 22 Jul 2020 16:11:52: 51000000 INFO @ Wed, 22 Jul 2020 16:11:53: 40000000 INFO @ Wed, 22 Jul 2020 16:11:55: 46000000 INFO @ Wed, 22 Jul 2020 16:11:57: 52000000 INFO @ Wed, 22 Jul 2020 16:11:58: 41000000 INFO @ Wed, 22 Jul 2020 16:12:00: 47000000 INFO @ Wed, 22 Jul 2020 16:12:03: 53000000 INFO @ Wed, 22 Jul 2020 16:12:04: 42000000 INFO @ Wed, 22 Jul 2020 16:12:06: 48000000 INFO @ Wed, 22 Jul 2020 16:12:08: 54000000 INFO @ Wed, 22 Jul 2020 16:12:09: 43000000 INFO @ Wed, 22 Jul 2020 16:12:11: 49000000 INFO @ Wed, 22 Jul 2020 16:12:14: 55000000 INFO @ Wed, 22 Jul 2020 16:12:15: 44000000 INFO @ Wed, 22 Jul 2020 16:12:17: 50000000 INFO @ Wed, 22 Jul 2020 16:12:20: 56000000 INFO @ Wed, 22 Jul 2020 16:12:21: 45000000 INFO @ Wed, 22 Jul 2020 16:12:23: 51000000 INFO @ Wed, 22 Jul 2020 16:12:26: 57000000 INFO @ Wed, 22 Jul 2020 16:12:26: 46000000 INFO @ Wed, 22 Jul 2020 16:12:28: 52000000 INFO @ Wed, 22 Jul 2020 16:12:31: 58000000 INFO @ Wed, 22 Jul 2020 16:12:32: 47000000 INFO @ Wed, 22 Jul 2020 16:12:34: 53000000 INFO @ Wed, 22 Jul 2020 16:12:37: 59000000 INFO @ Wed, 22 Jul 2020 16:12:38: 48000000 INFO @ Wed, 22 Jul 2020 16:12:40: 54000000 INFO @ Wed, 22 Jul 2020 16:12:43: 60000000 INFO @ Wed, 22 Jul 2020 16:12:43: 49000000 INFO @ Wed, 22 Jul 2020 16:12:45: 55000000 INFO @ Wed, 22 Jul 2020 16:12:48: 61000000 INFO @ Wed, 22 Jul 2020 16:12:49: 50000000 INFO @ Wed, 22 Jul 2020 16:12:51: 56000000 INFO @ Wed, 22 Jul 2020 16:12:54: 62000000 INFO @ Wed, 22 Jul 2020 16:12:54: 51000000 INFO @ Wed, 22 Jul 2020 16:12:56: 57000000 INFO @ Wed, 22 Jul 2020 16:13:00: 63000000 INFO @ Wed, 22 Jul 2020 16:13:00: 52000000 INFO @ Wed, 22 Jul 2020 16:13:02: 58000000 INFO @ Wed, 22 Jul 2020 16:13:05: 64000000 INFO @ Wed, 22 Jul 2020 16:13:06: 53000000 INFO @ Wed, 22 Jul 2020 16:13:07: #1 tag size is determined as 50 bps INFO @ Wed, 22 Jul 2020 16:13:07: #1 tag size = 50 INFO @ Wed, 22 Jul 2020 16:13:07: #1 total tags in treatment: 31467809 INFO @ Wed, 22 Jul 2020 16:13:07: #1 user defined the maximum tags... INFO @ Wed, 22 Jul 2020 16:13:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 22 Jul 2020 16:13:08: 59000000 INFO @ Wed, 22 Jul 2020 16:13:08: #1 tags after filtering in treatment: 16773596 INFO @ Wed, 22 Jul 2020 16:13:08: #1 Redundant rate of treatment: 0.47 INFO @ Wed, 22 Jul 2020 16:13:08: #1 finished! INFO @ Wed, 22 Jul 2020 16:13:08: #2 Build Peak Model... INFO @ Wed, 22 Jul 2020 16:13:08: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 22 Jul 2020 16:13:09: #2 number of paired peaks: 0 WARNING @ Wed, 22 Jul 2020 16:13:09: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 22 Jul 2020 16:13:09: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Wed, 22 Jul 2020 16:13:11: 54000000 INFO @ Wed, 22 Jul 2020 16:13:13: 60000000 INFO @ Wed, 22 Jul 2020 16:13:17: 55000000 INFO @ Wed, 22 Jul 2020 16:13:19: 61000000 INFO @ Wed, 22 Jul 2020 16:13:23: 56000000 INFO @ Wed, 22 Jul 2020 16:13:24: 62000000 INFO @ Wed, 22 Jul 2020 16:13:28: 57000000 INFO @ Wed, 22 Jul 2020 16:13:30: 63000000 INFO @ Wed, 22 Jul 2020 16:13:34: 58000000 INFO @ Wed, 22 Jul 2020 16:13:36: 64000000 INFO @ Wed, 22 Jul 2020 16:13:37: #1 tag size is determined as 50 bps INFO @ Wed, 22 Jul 2020 16:13:37: #1 tag size = 50 INFO @ Wed, 22 Jul 2020 16:13:37: #1 total tags in treatment: 31467809 INFO @ Wed, 22 Jul 2020 16:13:37: #1 user defined the maximum tags... INFO @ Wed, 22 Jul 2020 16:13:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 22 Jul 2020 16:13:38: #1 tags after filtering in treatment: 16773596 INFO @ Wed, 22 Jul 2020 16:13:38: #1 Redundant rate of treatment: 0.47 INFO @ Wed, 22 Jul 2020 16:13:38: #1 finished! INFO @ Wed, 22 Jul 2020 16:13:38: #2 Build Peak Model... INFO @ Wed, 22 Jul 2020 16:13:38: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 22 Jul 2020 16:13:39: #2 number of paired peaks: 0 WARNING @ Wed, 22 Jul 2020 16:13:39: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 22 Jul 2020 16:13:39: Process for pairing-model is terminated! INFO @ Wed, 22 Jul 2020 16:13:39: 59000000 cut: /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Wed, 22 Jul 2020 16:13:44: 60000000 INFO @ Wed, 22 Jul 2020 16:13:49: 61000000 INFO @ Wed, 22 Jul 2020 16:13:55: 62000000 INFO @ Wed, 22 Jul 2020 16:14:00: 63000000 INFO @ Wed, 22 Jul 2020 16:14:05: 64000000 INFO @ Wed, 22 Jul 2020 16:14:06: #1 tag size is determined as 50 bps INFO @ Wed, 22 Jul 2020 16:14:06: #1 tag size = 50 INFO @ Wed, 22 Jul 2020 16:14:06: #1 total tags in treatment: 31467809 INFO @ Wed, 22 Jul 2020 16:14:06: #1 user defined the maximum tags... INFO @ Wed, 22 Jul 2020 16:14:06: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 22 Jul 2020 16:14:07: #1 tags after filtering in treatment: 16773596 INFO @ Wed, 22 Jul 2020 16:14:07: #1 Redundant rate of treatment: 0.47 INFO @ Wed, 22 Jul 2020 16:14:07: #1 finished! INFO @ Wed, 22 Jul 2020 16:14:07: #2 Build Peak Model... INFO @ Wed, 22 Jul 2020 16:14:07: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 22 Jul 2020 16:14:08: #2 number of paired peaks: 0 WARNING @ Wed, 22 Jul 2020 16:14:08: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 22 Jul 2020 16:14:08: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX8639492/SRX8639492.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling