Job ID = 10223991 SRX = SRX7973304 Genome = sacCer3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 54938549 spots for SRR11394487/SRR11394487.sra Written 54938549 spots for SRR11394487/SRR11394487.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:21:42 54938549 reads; of these: 54938549 (100.00%) were paired; of these: 8741278 (15.91%) aligned concordantly 0 times 40831353 (74.32%) aligned concordantly exactly 1 time 5365918 (9.77%) aligned concordantly >1 times ---- 8741278 pairs aligned concordantly 0 times; of these: 1163185 (13.31%) aligned discordantly 1 time ---- 7578093 pairs aligned 0 times concordantly or discordantly; of these: 15156186 mates make up the pairs; of these: 14230673 (93.89%) aligned 0 times 461391 (3.04%) aligned exactly 1 time 464122 (3.06%) aligned >1 times 87.05% overall alignment rate Time searching: 00:21:42 Overall time: 00:21:42 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 3121090 / 47328392 = 0.0659 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 09:45:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 09:45:56: #1 read tag files... INFO @ Fri, 16 Oct 2020 09:45:56: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 09:46:01: 1000000 INFO @ Fri, 16 Oct 2020 09:46:05: 2000000 INFO @ Fri, 16 Oct 2020 09:46:10: 3000000 INFO @ Fri, 16 Oct 2020 09:46:14: 4000000 INFO @ Fri, 16 Oct 2020 09:46:18: 5000000 INFO @ Fri, 16 Oct 2020 09:46:23: 6000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 09:46:26: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 09:46:26: #1 read tag files... INFO @ Fri, 16 Oct 2020 09:46:26: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 09:46:27: 7000000 INFO @ Fri, 16 Oct 2020 09:46:31: 1000000 INFO @ Fri, 16 Oct 2020 09:46:32: 8000000 INFO @ Fri, 16 Oct 2020 09:46:37: 2000000 INFO @ Fri, 16 Oct 2020 09:46:37: 9000000 INFO @ Fri, 16 Oct 2020 09:46:42: 10000000 INFO @ Fri, 16 Oct 2020 09:46:42: 3000000 INFO @ Fri, 16 Oct 2020 09:46:47: 11000000 INFO @ Fri, 16 Oct 2020 09:46:47: 4000000 INFO @ Fri, 16 Oct 2020 09:46:51: 12000000 INFO @ Fri, 16 Oct 2020 09:46:53: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 09:46:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 09:46:56: #1 read tag files... INFO @ Fri, 16 Oct 2020 09:46:56: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 09:46:56: 13000000 INFO @ Fri, 16 Oct 2020 09:46:58: 6000000 INFO @ Fri, 16 Oct 2020 09:47:01: 14000000 INFO @ Fri, 16 Oct 2020 09:47:01: 1000000 INFO @ Fri, 16 Oct 2020 09:47:03: 7000000 INFO @ Fri, 16 Oct 2020 09:47:06: 15000000 INFO @ Fri, 16 Oct 2020 09:47:07: 2000000 INFO @ Fri, 16 Oct 2020 09:47:09: 8000000 INFO @ Fri, 16 Oct 2020 09:47:11: 16000000 INFO @ Fri, 16 Oct 2020 09:47:13: 3000000 INFO @ Fri, 16 Oct 2020 09:47:14: 9000000 INFO @ Fri, 16 Oct 2020 09:47:16: 17000000 INFO @ Fri, 16 Oct 2020 09:47:18: 4000000 INFO @ Fri, 16 Oct 2020 09:47:20: 10000000 INFO @ Fri, 16 Oct 2020 09:47:21: 18000000 INFO @ Fri, 16 Oct 2020 09:47:24: 5000000 INFO @ Fri, 16 Oct 2020 09:47:25: 11000000 INFO @ Fri, 16 Oct 2020 09:47:26: 19000000 INFO @ Fri, 16 Oct 2020 09:47:30: 6000000 INFO @ Fri, 16 Oct 2020 09:47:30: 12000000 INFO @ Fri, 16 Oct 2020 09:47:31: 20000000 INFO @ Fri, 16 Oct 2020 09:47:35: 7000000 INFO @ Fri, 16 Oct 2020 09:47:36: 21000000 INFO @ Fri, 16 Oct 2020 09:47:36: 13000000 INFO @ Fri, 16 Oct 2020 09:47:41: 22000000 INFO @ Fri, 16 Oct 2020 09:47:41: 8000000 INFO @ Fri, 16 Oct 2020 09:47:41: 14000000 INFO @ Fri, 16 Oct 2020 09:47:46: 23000000 INFO @ Fri, 16 Oct 2020 09:47:46: 9000000 INFO @ Fri, 16 Oct 2020 09:47:47: 15000000 INFO @ Fri, 16 Oct 2020 09:47:50: 24000000 INFO @ Fri, 16 Oct 2020 09:47:52: 10000000 INFO @ Fri, 16 Oct 2020 09:47:52: 16000000 INFO @ Fri, 16 Oct 2020 09:47:55: 25000000 INFO @ Fri, 16 Oct 2020 09:47:58: 17000000 INFO @ Fri, 16 Oct 2020 09:47:58: 11000000 INFO @ Fri, 16 Oct 2020 09:48:00: 26000000 INFO @ Fri, 16 Oct 2020 09:48:03: 18000000 INFO @ Fri, 16 Oct 2020 09:48:04: 12000000 INFO @ Fri, 16 Oct 2020 09:48:06: 27000000 INFO @ Fri, 16 Oct 2020 09:48:08: 19000000 INFO @ Fri, 16 Oct 2020 09:48:09: 13000000 INFO @ Fri, 16 Oct 2020 09:48:11: 28000000 INFO @ Fri, 16 Oct 2020 09:48:14: 20000000 INFO @ Fri, 16 Oct 2020 09:48:15: 14000000 INFO @ Fri, 16 Oct 2020 09:48:16: 29000000 INFO @ Fri, 16 Oct 2020 09:48:19: 21000000 INFO @ Fri, 16 Oct 2020 09:48:20: 30000000 INFO @ Fri, 16 Oct 2020 09:48:21: 15000000 INFO @ Fri, 16 Oct 2020 09:48:25: 22000000 INFO @ Fri, 16 Oct 2020 09:48:25: 31000000 INFO @ Fri, 16 Oct 2020 09:48:26: 16000000 INFO @ Fri, 16 Oct 2020 09:48:30: 32000000 INFO @ Fri, 16 Oct 2020 09:48:30: 23000000 INFO @ Fri, 16 Oct 2020 09:48:32: 17000000 INFO @ Fri, 16 Oct 2020 09:48:35: 33000000 INFO @ Fri, 16 Oct 2020 09:48:35: 24000000 INFO @ Fri, 16 Oct 2020 09:48:38: 18000000 INFO @ Fri, 16 Oct 2020 09:48:40: 34000000 INFO @ Fri, 16 Oct 2020 09:48:41: 25000000 INFO @ Fri, 16 Oct 2020 09:48:44: 19000000 INFO @ Fri, 16 Oct 2020 09:48:45: 35000000 INFO @ Fri, 16 Oct 2020 09:48:46: 26000000 INFO @ Fri, 16 Oct 2020 09:48:49: 20000000 INFO @ Fri, 16 Oct 2020 09:48:50: 36000000 INFO @ Fri, 16 Oct 2020 09:48:51: 27000000 INFO @ Fri, 16 Oct 2020 09:48:54: 37000000 INFO @ Fri, 16 Oct 2020 09:48:55: 21000000 INFO @ Fri, 16 Oct 2020 09:48:57: 28000000 INFO @ Fri, 16 Oct 2020 09:48:59: 38000000 INFO @ Fri, 16 Oct 2020 09:49:00: 22000000 INFO @ Fri, 16 Oct 2020 09:49:02: 29000000 INFO @ Fri, 16 Oct 2020 09:49:04: 39000000 INFO @ Fri, 16 Oct 2020 09:49:06: 23000000 INFO @ Fri, 16 Oct 2020 09:49:08: 30000000 INFO @ Fri, 16 Oct 2020 09:49:09: 40000000 INFO @ Fri, 16 Oct 2020 09:49:11: 24000000 INFO @ Fri, 16 Oct 2020 09:49:13: 31000000 INFO @ Fri, 16 Oct 2020 09:49:14: 41000000 INFO @ Fri, 16 Oct 2020 09:49:17: 25000000 INFO @ Fri, 16 Oct 2020 09:49:19: 42000000 INFO @ Fri, 16 Oct 2020 09:49:19: 32000000 INFO @ Fri, 16 Oct 2020 09:49:22: 26000000 INFO @ Fri, 16 Oct 2020 09:49:24: 43000000 INFO @ Fri, 16 Oct 2020 09:49:25: 33000000 INFO @ Fri, 16 Oct 2020 09:49:27: 27000000 INFO @ Fri, 16 Oct 2020 09:49:29: 44000000 INFO @ Fri, 16 Oct 2020 09:49:30: 34000000 INFO @ Fri, 16 Oct 2020 09:49:33: 28000000 INFO @ Fri, 16 Oct 2020 09:49:34: 45000000 INFO @ Fri, 16 Oct 2020 09:49:36: 35000000 INFO @ Fri, 16 Oct 2020 09:49:38: 29000000 INFO @ Fri, 16 Oct 2020 09:49:39: 46000000 INFO @ Fri, 16 Oct 2020 09:49:42: 36000000 INFO @ Fri, 16 Oct 2020 09:49:43: 30000000 INFO @ Fri, 16 Oct 2020 09:49:44: 47000000 INFO @ Fri, 16 Oct 2020 09:49:48: 37000000 INFO @ Fri, 16 Oct 2020 09:49:48: 48000000 INFO @ Fri, 16 Oct 2020 09:49:48: 31000000 INFO @ Fri, 16 Oct 2020 09:49:53: 38000000 INFO @ Fri, 16 Oct 2020 09:49:53: 49000000 INFO @ Fri, 16 Oct 2020 09:49:54: 32000000 INFO @ Fri, 16 Oct 2020 09:49:58: 50000000 INFO @ Fri, 16 Oct 2020 09:49:59: 39000000 INFO @ Fri, 16 Oct 2020 09:49:59: 33000000 INFO @ Fri, 16 Oct 2020 09:50:03: 51000000 INFO @ Fri, 16 Oct 2020 09:50:04: 34000000 INFO @ Fri, 16 Oct 2020 09:50:05: 40000000 INFO @ Fri, 16 Oct 2020 09:50:08: 52000000 INFO @ Fri, 16 Oct 2020 09:50:10: 35000000 INFO @ Fri, 16 Oct 2020 09:50:10: 41000000 INFO @ Fri, 16 Oct 2020 09:50:13: 53000000 INFO @ Fri, 16 Oct 2020 09:50:15: 36000000 INFO @ Fri, 16 Oct 2020 09:50:16: 42000000 INFO @ Fri, 16 Oct 2020 09:50:18: 54000000 INFO @ Fri, 16 Oct 2020 09:50:21: 37000000 INFO @ Fri, 16 Oct 2020 09:50:22: 43000000 INFO @ Fri, 16 Oct 2020 09:50:23: 55000000 INFO @ Fri, 16 Oct 2020 09:50:26: 38000000 INFO @ Fri, 16 Oct 2020 09:50:28: 44000000 INFO @ Fri, 16 Oct 2020 09:50:28: 56000000 INFO @ Fri, 16 Oct 2020 09:50:32: 39000000 INFO @ Fri, 16 Oct 2020 09:50:33: 57000000 INFO @ Fri, 16 Oct 2020 09:50:33: 45000000 INFO @ Fri, 16 Oct 2020 09:50:37: 58000000 INFO @ Fri, 16 Oct 2020 09:50:38: 40000000 INFO @ Fri, 16 Oct 2020 09:50:39: 46000000 INFO @ Fri, 16 Oct 2020 09:50:42: 59000000 INFO @ Fri, 16 Oct 2020 09:50:43: 41000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 16 Oct 2020 09:50:45: 47000000 INFO @ Fri, 16 Oct 2020 09:50:47: 60000000 INFO @ Fri, 16 Oct 2020 09:50:49: 42000000 INFO @ Fri, 16 Oct 2020 09:50:50: 48000000 INFO @ Fri, 16 Oct 2020 09:50:52: 61000000 INFO @ Fri, 16 Oct 2020 09:50:55: 43000000 INFO @ Fri, 16 Oct 2020 09:50:56: 49000000 INFO @ Fri, 16 Oct 2020 09:50:57: 62000000 INFO @ Fri, 16 Oct 2020 09:51:01: 44000000 BigWig に変換しました。 INFO @ Fri, 16 Oct 2020 09:51:02: 63000000 INFO @ Fri, 16 Oct 2020 09:51:02: 50000000 INFO @ Fri, 16 Oct 2020 09:51:06: 64000000 INFO @ Fri, 16 Oct 2020 09:51:07: 45000000 INFO @ Fri, 16 Oct 2020 09:51:08: 51000000 INFO @ Fri, 16 Oct 2020 09:51:11: 65000000 INFO @ Fri, 16 Oct 2020 09:51:12: 46000000 INFO @ Fri, 16 Oct 2020 09:51:13: 52000000 INFO @ Fri, 16 Oct 2020 09:51:16: 66000000 INFO @ Fri, 16 Oct 2020 09:51:18: 47000000 INFO @ Fri, 16 Oct 2020 09:51:19: 53000000 INFO @ Fri, 16 Oct 2020 09:51:21: 67000000 INFO @ Fri, 16 Oct 2020 09:51:24: 48000000 INFO @ Fri, 16 Oct 2020 09:51:25: 54000000 INFO @ Fri, 16 Oct 2020 09:51:26: 68000000 INFO @ Fri, 16 Oct 2020 09:51:30: 49000000 INFO @ Fri, 16 Oct 2020 09:51:30: 69000000 INFO @ Fri, 16 Oct 2020 09:51:30: 55000000 INFO @ Fri, 16 Oct 2020 09:51:35: 70000000 INFO @ Fri, 16 Oct 2020 09:51:35: 50000000 INFO @ Fri, 16 Oct 2020 09:51:36: 56000000 INFO @ Fri, 16 Oct 2020 09:51:40: 71000000 INFO @ Fri, 16 Oct 2020 09:51:41: 51000000 INFO @ Fri, 16 Oct 2020 09:51:42: 57000000 INFO @ Fri, 16 Oct 2020 09:51:45: 72000000 INFO @ Fri, 16 Oct 2020 09:51:47: 52000000 INFO @ Fri, 16 Oct 2020 09:51:47: 58000000 INFO @ Fri, 16 Oct 2020 09:51:50: 73000000 INFO @ Fri, 16 Oct 2020 09:51:52: 53000000 INFO @ Fri, 16 Oct 2020 09:51:53: 59000000 INFO @ Fri, 16 Oct 2020 09:51:54: 74000000 INFO @ Fri, 16 Oct 2020 09:51:58: 54000000 INFO @ Fri, 16 Oct 2020 09:51:58: 60000000 INFO @ Fri, 16 Oct 2020 09:51:59: 75000000 INFO @ Fri, 16 Oct 2020 09:52:04: 55000000 INFO @ Fri, 16 Oct 2020 09:52:04: 61000000 INFO @ Fri, 16 Oct 2020 09:52:04: 76000000 INFO @ Fri, 16 Oct 2020 09:52:09: 77000000 INFO @ Fri, 16 Oct 2020 09:52:09: 62000000 INFO @ Fri, 16 Oct 2020 09:52:10: 56000000 INFO @ Fri, 16 Oct 2020 09:52:14: 78000000 INFO @ Fri, 16 Oct 2020 09:52:15: 63000000 INFO @ Fri, 16 Oct 2020 09:52:15: 57000000 INFO @ Fri, 16 Oct 2020 09:52:18: 79000000 INFO @ Fri, 16 Oct 2020 09:52:20: 64000000 INFO @ Fri, 16 Oct 2020 09:52:21: 58000000 INFO @ Fri, 16 Oct 2020 09:52:23: 80000000 INFO @ Fri, 16 Oct 2020 09:52:25: 65000000 INFO @ Fri, 16 Oct 2020 09:52:27: 59000000 INFO @ Fri, 16 Oct 2020 09:52:28: 81000000 INFO @ Fri, 16 Oct 2020 09:52:31: 66000000 INFO @ Fri, 16 Oct 2020 09:52:32: 60000000 INFO @ Fri, 16 Oct 2020 09:52:33: 82000000 INFO @ Fri, 16 Oct 2020 09:52:36: 67000000 INFO @ Fri, 16 Oct 2020 09:52:38: 61000000 INFO @ Fri, 16 Oct 2020 09:52:38: 83000000 INFO @ Fri, 16 Oct 2020 09:52:42: 68000000 INFO @ Fri, 16 Oct 2020 09:52:42: 84000000 INFO @ Fri, 16 Oct 2020 09:52:43: 62000000 INFO @ Fri, 16 Oct 2020 09:52:47: 69000000 INFO @ Fri, 16 Oct 2020 09:52:47: 85000000 INFO @ Fri, 16 Oct 2020 09:52:48: 63000000 INFO @ Fri, 16 Oct 2020 09:52:52: 86000000 INFO @ Fri, 16 Oct 2020 09:52:52: 70000000 INFO @ Fri, 16 Oct 2020 09:52:54: 64000000 INFO @ Fri, 16 Oct 2020 09:52:57: 87000000 INFO @ Fri, 16 Oct 2020 09:52:58: 71000000 INFO @ Fri, 16 Oct 2020 09:52:59: 65000000 INFO @ Fri, 16 Oct 2020 09:53:02: 88000000 INFO @ Fri, 16 Oct 2020 09:53:03: 72000000 INFO @ Fri, 16 Oct 2020 09:53:05: 66000000 INFO @ Fri, 16 Oct 2020 09:53:07: 89000000 INFO @ Fri, 16 Oct 2020 09:53:08: 73000000 INFO @ Fri, 16 Oct 2020 09:53:09: #1 tag size is determined as 37 bps INFO @ Fri, 16 Oct 2020 09:53:09: #1 tag size = 37 INFO @ Fri, 16 Oct 2020 09:53:09: #1 total tags in treatment: 43100823 INFO @ Fri, 16 Oct 2020 09:53:09: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 09:53:09: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 09:53:10: #1 tags after filtering in treatment: 18336164 INFO @ Fri, 16 Oct 2020 09:53:10: #1 Redundant rate of treatment: 0.57 INFO @ Fri, 16 Oct 2020 09:53:10: #1 finished! INFO @ Fri, 16 Oct 2020 09:53:10: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 09:53:10: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 09:53:10: 67000000 INFO @ Fri, 16 Oct 2020 09:53:11: #2 number of paired peaks: 0 WARNING @ Fri, 16 Oct 2020 09:53:11: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 16 Oct 2020 09:53:11: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 16 Oct 2020 09:53:14: 74000000 INFO @ Fri, 16 Oct 2020 09:53:16: 68000000 INFO @ Fri, 16 Oct 2020 09:53:19: 75000000 INFO @ Fri, 16 Oct 2020 09:53:21: 69000000 INFO @ Fri, 16 Oct 2020 09:53:24: 76000000 INFO @ Fri, 16 Oct 2020 09:53:26: 70000000 INFO @ Fri, 16 Oct 2020 09:53:29: 77000000 INFO @ Fri, 16 Oct 2020 09:53:32: 71000000 INFO @ Fri, 16 Oct 2020 09:53:35: 78000000 INFO @ Fri, 16 Oct 2020 09:53:37: 72000000 INFO @ Fri, 16 Oct 2020 09:53:40: 79000000 INFO @ Fri, 16 Oct 2020 09:53:42: 73000000 INFO @ Fri, 16 Oct 2020 09:53:45: 80000000 INFO @ Fri, 16 Oct 2020 09:53:48: 74000000 INFO @ Fri, 16 Oct 2020 09:53:51: 81000000 INFO @ Fri, 16 Oct 2020 09:53:53: 75000000 INFO @ Fri, 16 Oct 2020 09:53:56: 82000000 INFO @ Fri, 16 Oct 2020 09:53:59: 76000000 INFO @ Fri, 16 Oct 2020 09:54:01: 83000000 INFO @ Fri, 16 Oct 2020 09:54:04: 77000000 INFO @ Fri, 16 Oct 2020 09:54:07: 84000000 INFO @ Fri, 16 Oct 2020 09:54:09: 78000000 INFO @ Fri, 16 Oct 2020 09:54:12: 85000000 INFO @ Fri, 16 Oct 2020 09:54:15: 79000000 INFO @ Fri, 16 Oct 2020 09:54:17: 86000000 INFO @ Fri, 16 Oct 2020 09:54:20: 80000000 INFO @ Fri, 16 Oct 2020 09:54:22: 87000000 INFO @ Fri, 16 Oct 2020 09:54:25: 81000000 INFO @ Fri, 16 Oct 2020 09:54:28: 88000000 INFO @ Fri, 16 Oct 2020 09:54:31: 82000000 INFO @ Fri, 16 Oct 2020 09:54:33: 89000000 INFO @ Fri, 16 Oct 2020 09:54:36: #1 tag size is determined as 37 bps INFO @ Fri, 16 Oct 2020 09:54:36: #1 tag size = 37 INFO @ Fri, 16 Oct 2020 09:54:36: #1 total tags in treatment: 43100823 INFO @ Fri, 16 Oct 2020 09:54:36: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 09:54:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 09:54:36: 83000000 INFO @ Fri, 16 Oct 2020 09:54:37: #1 tags after filtering in treatment: 18336164 INFO @ Fri, 16 Oct 2020 09:54:37: #1 Redundant rate of treatment: 0.57 INFO @ Fri, 16 Oct 2020 09:54:37: #1 finished! INFO @ Fri, 16 Oct 2020 09:54:37: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 09:54:37: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 09:54:38: #2 number of paired peaks: 0 WARNING @ Fri, 16 Oct 2020 09:54:38: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 16 Oct 2020 09:54:38: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 16 Oct 2020 09:54:41: 84000000 INFO @ Fri, 16 Oct 2020 09:54:46: 85000000 INFO @ Fri, 16 Oct 2020 09:54:51: 86000000 INFO @ Fri, 16 Oct 2020 09:54:56: 87000000 INFO @ Fri, 16 Oct 2020 09:55:01: 88000000 INFO @ Fri, 16 Oct 2020 09:55:06: 89000000 INFO @ Fri, 16 Oct 2020 09:55:09: #1 tag size is determined as 37 bps INFO @ Fri, 16 Oct 2020 09:55:09: #1 tag size = 37 INFO @ Fri, 16 Oct 2020 09:55:09: #1 total tags in treatment: 43100823 INFO @ Fri, 16 Oct 2020 09:55:09: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 09:55:09: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 09:55:10: #1 tags after filtering in treatment: 18336164 INFO @ Fri, 16 Oct 2020 09:55:10: #1 Redundant rate of treatment: 0.57 INFO @ Fri, 16 Oct 2020 09:55:10: #1 finished! INFO @ Fri, 16 Oct 2020 09:55:10: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 09:55:10: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 09:55:11: #2 number of paired peaks: 0 WARNING @ Fri, 16 Oct 2020 09:55:11: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 16 Oct 2020 09:55:11: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973304/SRX7973304.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling