Job ID = 14519964 SRX = SRX7973298 Genome = sacCer3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 41401342 spots for SRR11394481/SRR11394481.sra Written 41401342 spots for SRR11394481/SRR11394481.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:26:12 41401342 reads; of these: 41401342 (100.00%) were paired; of these: 4238149 (10.24%) aligned concordantly 0 times 33301219 (80.44%) aligned concordantly exactly 1 time 3861974 (9.33%) aligned concordantly >1 times ---- 4238149 pairs aligned concordantly 0 times; of these: 926514 (21.86%) aligned discordantly 1 time ---- 3311635 pairs aligned 0 times concordantly or discordantly; of these: 6623270 mates make up the pairs; of these: 5986418 (90.38%) aligned 0 times 383636 (5.79%) aligned exactly 1 time 253216 (3.82%) aligned >1 times 92.77% overall alignment rate Time searching: 00:26:12 Overall time: 00:26:12 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 1534458 / 38069439 = 0.0403 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 19:00:21: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 19:00:21: #1 read tag files... INFO @ Sat, 15 Jan 2022 19:00:21: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 19:00:25: 1000000 INFO @ Sat, 15 Jan 2022 19:00:29: 2000000 INFO @ Sat, 15 Jan 2022 19:00:34: 3000000 INFO @ Sat, 15 Jan 2022 19:00:38: 4000000 INFO @ Sat, 15 Jan 2022 19:00:42: 5000000 INFO @ Sat, 15 Jan 2022 19:00:47: 6000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 19:00:50: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 19:00:50: #1 read tag files... INFO @ Sat, 15 Jan 2022 19:00:50: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 19:00:51: 7000000 INFO @ Sat, 15 Jan 2022 19:00:55: 1000000 INFO @ Sat, 15 Jan 2022 19:00:55: 8000000 INFO @ Sat, 15 Jan 2022 19:00:59: 2000000 INFO @ Sat, 15 Jan 2022 19:01:00: 9000000 INFO @ Sat, 15 Jan 2022 19:01:03: 3000000 INFO @ Sat, 15 Jan 2022 19:01:04: 10000000 INFO @ Sat, 15 Jan 2022 19:01:08: 4000000 INFO @ Sat, 15 Jan 2022 19:01:08: 11000000 INFO @ Sat, 15 Jan 2022 19:01:12: 5000000 INFO @ Sat, 15 Jan 2022 19:01:13: 12000000 INFO @ Sat, 15 Jan 2022 19:01:16: 6000000 INFO @ Sat, 15 Jan 2022 19:01:17: 13000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 15 Jan 2022 19:01:20: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 15 Jan 2022 19:01:20: #1 read tag files... INFO @ Sat, 15 Jan 2022 19:01:20: #1 read treatment tags... INFO @ Sat, 15 Jan 2022 19:01:20: 7000000 INFO @ Sat, 15 Jan 2022 19:01:22: 14000000 INFO @ Sat, 15 Jan 2022 19:01:25: 8000000 INFO @ Sat, 15 Jan 2022 19:01:25: 1000000 INFO @ Sat, 15 Jan 2022 19:01:26: 15000000 INFO @ Sat, 15 Jan 2022 19:01:30: 9000000 INFO @ Sat, 15 Jan 2022 19:01:30: 2000000 INFO @ Sat, 15 Jan 2022 19:01:30: 16000000 INFO @ Sat, 15 Jan 2022 19:01:34: 10000000 INFO @ Sat, 15 Jan 2022 19:01:35: 3000000 INFO @ Sat, 15 Jan 2022 19:01:35: 17000000 INFO @ Sat, 15 Jan 2022 19:01:39: 11000000 INFO @ Sat, 15 Jan 2022 19:01:39: 18000000 INFO @ Sat, 15 Jan 2022 19:01:39: 4000000 INFO @ Sat, 15 Jan 2022 19:01:44: 12000000 INFO @ Sat, 15 Jan 2022 19:01:44: 19000000 INFO @ Sat, 15 Jan 2022 19:01:44: 5000000 INFO @ Sat, 15 Jan 2022 19:01:48: 20000000 INFO @ Sat, 15 Jan 2022 19:01:48: 13000000 INFO @ Sat, 15 Jan 2022 19:01:49: 6000000 INFO @ Sat, 15 Jan 2022 19:01:52: 21000000 INFO @ Sat, 15 Jan 2022 19:01:53: 14000000 INFO @ Sat, 15 Jan 2022 19:01:54: 7000000 INFO @ Sat, 15 Jan 2022 19:01:57: 22000000 INFO @ Sat, 15 Jan 2022 19:01:58: 15000000 INFO @ Sat, 15 Jan 2022 19:01:59: 8000000 INFO @ Sat, 15 Jan 2022 19:02:01: 23000000 INFO @ Sat, 15 Jan 2022 19:02:03: 16000000 INFO @ Sat, 15 Jan 2022 19:02:04: 9000000 INFO @ Sat, 15 Jan 2022 19:02:06: 24000000 INFO @ Sat, 15 Jan 2022 19:02:07: 17000000 INFO @ Sat, 15 Jan 2022 19:02:08: 10000000 INFO @ Sat, 15 Jan 2022 19:02:10: 25000000 INFO @ Sat, 15 Jan 2022 19:02:12: 18000000 INFO @ Sat, 15 Jan 2022 19:02:13: 11000000 INFO @ Sat, 15 Jan 2022 19:02:14: 26000000 INFO @ Sat, 15 Jan 2022 19:02:16: 19000000 INFO @ Sat, 15 Jan 2022 19:02:17: 12000000 INFO @ Sat, 15 Jan 2022 19:02:18: 27000000 INFO @ Sat, 15 Jan 2022 19:02:21: 20000000 INFO @ Sat, 15 Jan 2022 19:02:22: 13000000 INFO @ Sat, 15 Jan 2022 19:02:23: 28000000 INFO @ Sat, 15 Jan 2022 19:02:25: 21000000 INFO @ Sat, 15 Jan 2022 19:02:27: 14000000 INFO @ Sat, 15 Jan 2022 19:02:27: 29000000 INFO @ Sat, 15 Jan 2022 19:02:30: 22000000 INFO @ Sat, 15 Jan 2022 19:02:31: 15000000 INFO @ Sat, 15 Jan 2022 19:02:31: 30000000 INFO @ Sat, 15 Jan 2022 19:02:34: 23000000 INFO @ Sat, 15 Jan 2022 19:02:36: 31000000 INFO @ Sat, 15 Jan 2022 19:02:36: 16000000 INFO @ Sat, 15 Jan 2022 19:02:39: 24000000 INFO @ Sat, 15 Jan 2022 19:02:40: 32000000 INFO @ Sat, 15 Jan 2022 19:02:40: 17000000 INFO @ Sat, 15 Jan 2022 19:02:43: 25000000 INFO @ Sat, 15 Jan 2022 19:02:44: 33000000 INFO @ Sat, 15 Jan 2022 19:02:45: 18000000 INFO @ Sat, 15 Jan 2022 19:02:48: 26000000 INFO @ Sat, 15 Jan 2022 19:02:48: 34000000 INFO @ Sat, 15 Jan 2022 19:02:50: 19000000 INFO @ Sat, 15 Jan 2022 19:02:52: 27000000 INFO @ Sat, 15 Jan 2022 19:02:53: 35000000 INFO @ Sat, 15 Jan 2022 19:02:54: 20000000 INFO @ Sat, 15 Jan 2022 19:02:57: 28000000 INFO @ Sat, 15 Jan 2022 19:02:57: 36000000 INFO @ Sat, 15 Jan 2022 19:02:59: 21000000 INFO @ Sat, 15 Jan 2022 19:03:02: 29000000 INFO @ Sat, 15 Jan 2022 19:03:02: 37000000 INFO @ Sat, 15 Jan 2022 19:03:04: 22000000 INFO @ Sat, 15 Jan 2022 19:03:06: 38000000 INFO @ Sat, 15 Jan 2022 19:03:06: 30000000 INFO @ Sat, 15 Jan 2022 19:03:08: 23000000 INFO @ Sat, 15 Jan 2022 19:03:10: 39000000 INFO @ Sat, 15 Jan 2022 19:03:11: 31000000 INFO @ Sat, 15 Jan 2022 19:03:13: 24000000 INFO @ Sat, 15 Jan 2022 19:03:14: 40000000 INFO @ Sat, 15 Jan 2022 19:03:15: 32000000 INFO @ Sat, 15 Jan 2022 19:03:17: 25000000 INFO @ Sat, 15 Jan 2022 19:03:18: 41000000 INFO @ Sat, 15 Jan 2022 19:03:19: 33000000 INFO @ Sat, 15 Jan 2022 19:03:22: 26000000 INFO @ Sat, 15 Jan 2022 19:03:23: 42000000 INFO @ Sat, 15 Jan 2022 19:03:24: 34000000 INFO @ Sat, 15 Jan 2022 19:03:26: 27000000 INFO @ Sat, 15 Jan 2022 19:03:27: 43000000 INFO @ Sat, 15 Jan 2022 19:03:28: 35000000 INFO @ Sat, 15 Jan 2022 19:03:31: 28000000 INFO @ Sat, 15 Jan 2022 19:03:31: 44000000 INFO @ Sat, 15 Jan 2022 19:03:33: 36000000 INFO @ Sat, 15 Jan 2022 19:03:35: 45000000 INFO @ Sat, 15 Jan 2022 19:03:36: 29000000 INFO @ Sat, 15 Jan 2022 19:03:37: 37000000 INFO @ Sat, 15 Jan 2022 19:03:40: 46000000 INFO @ Sat, 15 Jan 2022 19:03:40: 30000000 INFO @ Sat, 15 Jan 2022 19:03:41: 38000000 INFO @ Sat, 15 Jan 2022 19:03:44: 47000000 INFO @ Sat, 15 Jan 2022 19:03:45: 31000000 INFO @ Sat, 15 Jan 2022 19:03:46: 39000000 INFO @ Sat, 15 Jan 2022 19:03:48: 48000000 INFO @ Sat, 15 Jan 2022 19:03:49: 32000000 INFO @ Sat, 15 Jan 2022 19:03:50: 40000000 INFO @ Sat, 15 Jan 2022 19:03:52: 49000000 INFO @ Sat, 15 Jan 2022 19:03:54: 33000000 INFO @ Sat, 15 Jan 2022 19:03:55: 41000000 INFO @ Sat, 15 Jan 2022 19:03:56: 50000000 INFO @ Sat, 15 Jan 2022 19:03:58: 34000000 INFO @ Sat, 15 Jan 2022 19:03:59: 42000000 INFO @ Sat, 15 Jan 2022 19:04:01: 51000000 INFO @ Sat, 15 Jan 2022 19:04:03: 35000000 INFO @ Sat, 15 Jan 2022 19:04:03: 43000000 INFO @ Sat, 15 Jan 2022 19:04:05: 52000000 INFO @ Sat, 15 Jan 2022 19:04:07: 36000000 INFO @ Sat, 15 Jan 2022 19:04:08: 44000000 INFO @ Sat, 15 Jan 2022 19:04:09: 53000000 INFO @ Sat, 15 Jan 2022 19:04:12: 37000000 INFO @ Sat, 15 Jan 2022 19:04:12: 45000000 INFO @ Sat, 15 Jan 2022 19:04:14: 54000000 INFO @ Sat, 15 Jan 2022 19:04:16: 38000000 INFO @ Sat, 15 Jan 2022 19:04:17: 46000000 INFO @ Sat, 15 Jan 2022 19:04:18: 55000000 INFO @ Sat, 15 Jan 2022 19:04:21: 39000000 INFO @ Sat, 15 Jan 2022 19:04:21: 47000000 INFO @ Sat, 15 Jan 2022 19:04:22: 56000000 INFO @ Sat, 15 Jan 2022 19:04:25: 40000000 INFO @ Sat, 15 Jan 2022 19:04:25: 48000000 INFO @ Sat, 15 Jan 2022 19:04:26: 57000000 INFO @ Sat, 15 Jan 2022 19:04:30: 41000000 INFO @ Sat, 15 Jan 2022 19:04:30: 49000000 INFO @ Sat, 15 Jan 2022 19:04:31: 58000000 INFO @ Sat, 15 Jan 2022 19:04:35: 42000000 INFO @ Sat, 15 Jan 2022 19:04:35: 50000000 INFO @ Sat, 15 Jan 2022 19:04:35: 59000000 INFO @ Sat, 15 Jan 2022 19:04:39: 43000000 INFO @ Sat, 15 Jan 2022 19:04:39: 51000000 INFO @ Sat, 15 Jan 2022 19:04:39: 60000000 INFO @ Sat, 15 Jan 2022 19:04:43: 44000000 INFO @ Sat, 15 Jan 2022 19:04:44: 52000000 INFO @ Sat, 15 Jan 2022 19:04:44: 61000000 INFO @ Sat, 15 Jan 2022 19:04:48: 62000000 INFO @ Sat, 15 Jan 2022 19:04:48: 45000000 INFO @ Sat, 15 Jan 2022 19:04:48: 53000000 INFO @ Sat, 15 Jan 2022 19:04:52: 63000000 INFO @ Sat, 15 Jan 2022 19:04:52: 46000000 INFO @ Sat, 15 Jan 2022 19:04:53: 54000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 15 Jan 2022 19:04:56: 64000000 INFO @ Sat, 15 Jan 2022 19:04:57: 47000000 INFO @ Sat, 15 Jan 2022 19:04:57: 55000000 INFO @ Sat, 15 Jan 2022 19:05:01: 65000000 INFO @ Sat, 15 Jan 2022 19:05:02: 48000000 INFO @ Sat, 15 Jan 2022 19:05:02: 56000000 INFO @ Sat, 15 Jan 2022 19:05:05: 66000000 INFO @ Sat, 15 Jan 2022 19:05:06: 49000000 INFO @ Sat, 15 Jan 2022 19:05:06: 57000000 INFO @ Sat, 15 Jan 2022 19:05:09: 67000000 INFO @ Sat, 15 Jan 2022 19:05:11: 50000000 INFO @ Sat, 15 Jan 2022 19:05:11: 58000000 INFO @ Sat, 15 Jan 2022 19:05:14: 68000000 INFO @ Sat, 15 Jan 2022 19:05:15: 51000000 INFO @ Sat, 15 Jan 2022 19:05:15: 59000000 BigWig に変換しました。 INFO @ Sat, 15 Jan 2022 19:05:18: 69000000 INFO @ Sat, 15 Jan 2022 19:05:20: 60000000 INFO @ Sat, 15 Jan 2022 19:05:20: 52000000 INFO @ Sat, 15 Jan 2022 19:05:22: 70000000 INFO @ Sat, 15 Jan 2022 19:05:24: 61000000 INFO @ Sat, 15 Jan 2022 19:05:24: 53000000 INFO @ Sat, 15 Jan 2022 19:05:27: 71000000 INFO @ Sat, 15 Jan 2022 19:05:29: 62000000 INFO @ Sat, 15 Jan 2022 19:05:29: 54000000 INFO @ Sat, 15 Jan 2022 19:05:31: 72000000 INFO @ Sat, 15 Jan 2022 19:05:34: 63000000 INFO @ Sat, 15 Jan 2022 19:05:34: 55000000 INFO @ Sat, 15 Jan 2022 19:05:35: 73000000 INFO @ Sat, 15 Jan 2022 19:05:38: 64000000 INFO @ Sat, 15 Jan 2022 19:05:38: 56000000 INFO @ Sat, 15 Jan 2022 19:05:39: #1 tag size is determined as 36 bps INFO @ Sat, 15 Jan 2022 19:05:39: #1 tag size = 36 INFO @ Sat, 15 Jan 2022 19:05:39: #1 total tags in treatment: 35640974 INFO @ Sat, 15 Jan 2022 19:05:39: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 19:05:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 19:05:40: #1 tags after filtering in treatment: 15840500 INFO @ Sat, 15 Jan 2022 19:05:40: #1 Redundant rate of treatment: 0.56 INFO @ Sat, 15 Jan 2022 19:05:40: #1 finished! INFO @ Sat, 15 Jan 2022 19:05:40: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 19:05:40: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 19:05:41: #2 number of paired peaks: 0 WARNING @ Sat, 15 Jan 2022 19:05:41: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sat, 15 Jan 2022 19:05:41: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sat, 15 Jan 2022 19:05:43: 65000000 INFO @ Sat, 15 Jan 2022 19:05:43: 57000000 INFO @ Sat, 15 Jan 2022 19:05:47: 66000000 INFO @ Sat, 15 Jan 2022 19:05:48: 58000000 INFO @ Sat, 15 Jan 2022 19:05:52: 67000000 INFO @ Sat, 15 Jan 2022 19:05:52: 59000000 INFO @ Sat, 15 Jan 2022 19:05:57: 68000000 INFO @ Sat, 15 Jan 2022 19:05:57: 60000000 INFO @ Sat, 15 Jan 2022 19:06:01: 69000000 INFO @ Sat, 15 Jan 2022 19:06:02: 61000000 INFO @ Sat, 15 Jan 2022 19:06:06: 70000000 INFO @ Sat, 15 Jan 2022 19:06:06: 62000000 INFO @ Sat, 15 Jan 2022 19:06:10: 71000000 INFO @ Sat, 15 Jan 2022 19:06:11: 63000000 INFO @ Sat, 15 Jan 2022 19:06:15: 72000000 INFO @ Sat, 15 Jan 2022 19:06:15: 64000000 INFO @ Sat, 15 Jan 2022 19:06:19: 73000000 INFO @ Sat, 15 Jan 2022 19:06:20: 65000000 INFO @ Sat, 15 Jan 2022 19:06:23: #1 tag size is determined as 36 bps INFO @ Sat, 15 Jan 2022 19:06:23: #1 tag size = 36 INFO @ Sat, 15 Jan 2022 19:06:23: #1 total tags in treatment: 35640974 INFO @ Sat, 15 Jan 2022 19:06:23: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 19:06:23: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 19:06:24: #1 tags after filtering in treatment: 15840500 INFO @ Sat, 15 Jan 2022 19:06:24: #1 Redundant rate of treatment: 0.56 INFO @ Sat, 15 Jan 2022 19:06:24: #1 finished! INFO @ Sat, 15 Jan 2022 19:06:24: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 19:06:24: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 19:06:24: 66000000 INFO @ Sat, 15 Jan 2022 19:06:25: #2 number of paired peaks: 0 WARNING @ Sat, 15 Jan 2022 19:06:25: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sat, 15 Jan 2022 19:06:25: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sat, 15 Jan 2022 19:06:28: 67000000 INFO @ Sat, 15 Jan 2022 19:06:33: 68000000 INFO @ Sat, 15 Jan 2022 19:06:37: 69000000 INFO @ Sat, 15 Jan 2022 19:06:41: 70000000 INFO @ Sat, 15 Jan 2022 19:06:45: 71000000 INFO @ Sat, 15 Jan 2022 19:06:49: 72000000 INFO @ Sat, 15 Jan 2022 19:06:53: 73000000 INFO @ Sat, 15 Jan 2022 19:06:57: #1 tag size is determined as 36 bps INFO @ Sat, 15 Jan 2022 19:06:57: #1 tag size = 36 INFO @ Sat, 15 Jan 2022 19:06:57: #1 total tags in treatment: 35640974 INFO @ Sat, 15 Jan 2022 19:06:57: #1 user defined the maximum tags... INFO @ Sat, 15 Jan 2022 19:06:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 15 Jan 2022 19:06:58: #1 tags after filtering in treatment: 15840500 INFO @ Sat, 15 Jan 2022 19:06:58: #1 Redundant rate of treatment: 0.56 INFO @ Sat, 15 Jan 2022 19:06:58: #1 finished! INFO @ Sat, 15 Jan 2022 19:06:58: #2 Build Peak Model... INFO @ Sat, 15 Jan 2022 19:06:58: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 15 Jan 2022 19:06:59: #2 number of paired peaks: 0 WARNING @ Sat, 15 Jan 2022 19:06:59: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sat, 15 Jan 2022 19:06:59: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7973298/SRX7973298.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling