Job ID = 5791655 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-04-22T01:38:40 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 48,733,453 reads read : 97,466,906 reads written : 97,466,906 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:27:03 48733453 reads; of these: 48733453 (100.00%) were paired; of these: 1350005 (2.77%) aligned concordantly 0 times 42934196 (88.10%) aligned concordantly exactly 1 time 4449252 (9.13%) aligned concordantly >1 times ---- 1350005 pairs aligned concordantly 0 times; of these: 50018 (3.71%) aligned discordantly 1 time ---- 1299987 pairs aligned 0 times concordantly or discordantly; of these: 2599974 mates make up the pairs; of these: 2107927 (81.07%) aligned 0 times 413225 (15.89%) aligned exactly 1 time 78822 (3.03%) aligned >1 times 97.84% overall alignment rate Time searching: 00:27:03 Overall time: 00:27:03 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 11689319 / 47393526 = 0.2466 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 22 Apr 2020 11:25:35: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 22 Apr 2020 11:25:35: #1 read tag files... INFO @ Wed, 22 Apr 2020 11:25:35: #1 read treatment tags... INFO @ Wed, 22 Apr 2020 11:25:41: 1000000 INFO @ Wed, 22 Apr 2020 11:25:46: 2000000 INFO @ Wed, 22 Apr 2020 11:25:51: 3000000 INFO @ Wed, 22 Apr 2020 11:25:55: 4000000 INFO @ Wed, 22 Apr 2020 11:26:00: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 22 Apr 2020 11:26:05: 6000000 INFO @ Wed, 22 Apr 2020 11:26:05: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 22 Apr 2020 11:26:05: #1 read tag files... INFO @ Wed, 22 Apr 2020 11:26:05: #1 read treatment tags... INFO @ Wed, 22 Apr 2020 11:26:09: 7000000 INFO @ Wed, 22 Apr 2020 11:26:10: 1000000 INFO @ Wed, 22 Apr 2020 11:26:14: 8000000 INFO @ Wed, 22 Apr 2020 11:26:16: 2000000 INFO @ Wed, 22 Apr 2020 11:26:19: 9000000 INFO @ Wed, 22 Apr 2020 11:26:21: 3000000 INFO @ Wed, 22 Apr 2020 11:26:24: 10000000 INFO @ Wed, 22 Apr 2020 11:26:27: 4000000 INFO @ Wed, 22 Apr 2020 11:26:29: 11000000 INFO @ Wed, 22 Apr 2020 11:26:32: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Wed, 22 Apr 2020 11:26:33: 12000000 INFO @ Wed, 22 Apr 2020 11:26:35: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 22 Apr 2020 11:26:35: #1 read tag files... INFO @ Wed, 22 Apr 2020 11:26:35: #1 read treatment tags... INFO @ Wed, 22 Apr 2020 11:26:37: 6000000 INFO @ Wed, 22 Apr 2020 11:26:38: 13000000 INFO @ Wed, 22 Apr 2020 11:26:40: 1000000 INFO @ Wed, 22 Apr 2020 11:26:43: 7000000 INFO @ Wed, 22 Apr 2020 11:26:43: 14000000 INFO @ Wed, 22 Apr 2020 11:26:46: 2000000 INFO @ Wed, 22 Apr 2020 11:26:48: 15000000 INFO @ Wed, 22 Apr 2020 11:26:48: 8000000 INFO @ Wed, 22 Apr 2020 11:26:51: 3000000 INFO @ Wed, 22 Apr 2020 11:26:53: 16000000 INFO @ Wed, 22 Apr 2020 11:26:54: 9000000 INFO @ Wed, 22 Apr 2020 11:26:56: 4000000 INFO @ Wed, 22 Apr 2020 11:26:58: 17000000 INFO @ Wed, 22 Apr 2020 11:26:59: 10000000 INFO @ Wed, 22 Apr 2020 11:27:02: 5000000 INFO @ Wed, 22 Apr 2020 11:27:03: 18000000 INFO @ Wed, 22 Apr 2020 11:27:04: 11000000 INFO @ Wed, 22 Apr 2020 11:27:07: 6000000 INFO @ Wed, 22 Apr 2020 11:27:08: 19000000 INFO @ Wed, 22 Apr 2020 11:27:10: 12000000 INFO @ Wed, 22 Apr 2020 11:27:12: 7000000 INFO @ Wed, 22 Apr 2020 11:27:13: 20000000 INFO @ Wed, 22 Apr 2020 11:27:15: 13000000 INFO @ Wed, 22 Apr 2020 11:27:18: 21000000 INFO @ Wed, 22 Apr 2020 11:27:18: 8000000 INFO @ Wed, 22 Apr 2020 11:27:21: 14000000 INFO @ Wed, 22 Apr 2020 11:27:23: 22000000 INFO @ Wed, 22 Apr 2020 11:27:23: 9000000 INFO @ Wed, 22 Apr 2020 11:27:26: 15000000 INFO @ Wed, 22 Apr 2020 11:27:28: 10000000 INFO @ Wed, 22 Apr 2020 11:27:29: 23000000 INFO @ Wed, 22 Apr 2020 11:27:32: 16000000 INFO @ Wed, 22 Apr 2020 11:27:34: 24000000 INFO @ Wed, 22 Apr 2020 11:27:34: 11000000 INFO @ Wed, 22 Apr 2020 11:27:37: 17000000 INFO @ Wed, 22 Apr 2020 11:27:38: 25000000 INFO @ Wed, 22 Apr 2020 11:27:39: 12000000 INFO @ Wed, 22 Apr 2020 11:27:42: 18000000 INFO @ Wed, 22 Apr 2020 11:27:43: 26000000 INFO @ Wed, 22 Apr 2020 11:27:45: 13000000 INFO @ Wed, 22 Apr 2020 11:27:47: 19000000 INFO @ Wed, 22 Apr 2020 11:27:48: 27000000 INFO @ Wed, 22 Apr 2020 11:27:50: 14000000 INFO @ Wed, 22 Apr 2020 11:27:52: 20000000 INFO @ Wed, 22 Apr 2020 11:27:53: 28000000 INFO @ Wed, 22 Apr 2020 11:27:55: 15000000 INFO @ Wed, 22 Apr 2020 11:27:58: 21000000 INFO @ Wed, 22 Apr 2020 11:27:58: 29000000 INFO @ Wed, 22 Apr 2020 11:28:01: 16000000 INFO @ Wed, 22 Apr 2020 11:28:02: 30000000 INFO @ Wed, 22 Apr 2020 11:28:03: 22000000 INFO @ Wed, 22 Apr 2020 11:28:06: 17000000 INFO @ Wed, 22 Apr 2020 11:28:07: 31000000 INFO @ Wed, 22 Apr 2020 11:28:07: 23000000 INFO @ Wed, 22 Apr 2020 11:28:11: 18000000 INFO @ Wed, 22 Apr 2020 11:28:12: 32000000 INFO @ Wed, 22 Apr 2020 11:28:13: 24000000 INFO @ Wed, 22 Apr 2020 11:28:16: 19000000 INFO @ Wed, 22 Apr 2020 11:28:17: 33000000 INFO @ Wed, 22 Apr 2020 11:28:18: 25000000 INFO @ Wed, 22 Apr 2020 11:28:21: 20000000 INFO @ Wed, 22 Apr 2020 11:28:21: 34000000 INFO @ Wed, 22 Apr 2020 11:28:24: 26000000 INFO @ Wed, 22 Apr 2020 11:28:26: 35000000 INFO @ Wed, 22 Apr 2020 11:28:26: 21000000 INFO @ Wed, 22 Apr 2020 11:28:29: 27000000 INFO @ Wed, 22 Apr 2020 11:28:31: 36000000 INFO @ Wed, 22 Apr 2020 11:28:32: 22000000 INFO @ Wed, 22 Apr 2020 11:28:35: 28000000 INFO @ Wed, 22 Apr 2020 11:28:35: 37000000 INFO @ Wed, 22 Apr 2020 11:28:36: 23000000 INFO @ Wed, 22 Apr 2020 11:28:40: 38000000 INFO @ Wed, 22 Apr 2020 11:28:40: 29000000 INFO @ Wed, 22 Apr 2020 11:28:41: 24000000 INFO @ Wed, 22 Apr 2020 11:28:45: 39000000 INFO @ Wed, 22 Apr 2020 11:28:46: 30000000 INFO @ Wed, 22 Apr 2020 11:28:47: 25000000 INFO @ Wed, 22 Apr 2020 11:28:49: 40000000 INFO @ Wed, 22 Apr 2020 11:28:51: 31000000 INFO @ Wed, 22 Apr 2020 11:28:52: 26000000 INFO @ Wed, 22 Apr 2020 11:28:54: 41000000 INFO @ Wed, 22 Apr 2020 11:28:57: 32000000 INFO @ Wed, 22 Apr 2020 11:28:58: 27000000 INFO @ Wed, 22 Apr 2020 11:28:58: 42000000 INFO @ Wed, 22 Apr 2020 11:29:02: 33000000 INFO @ Wed, 22 Apr 2020 11:29:03: 28000000 INFO @ Wed, 22 Apr 2020 11:29:03: 43000000 INFO @ Wed, 22 Apr 2020 11:29:07: 34000000 INFO @ Wed, 22 Apr 2020 11:29:08: 44000000 INFO @ Wed, 22 Apr 2020 11:29:08: 29000000 INFO @ Wed, 22 Apr 2020 11:29:12: 45000000 INFO @ Wed, 22 Apr 2020 11:29:13: 35000000 INFO @ Wed, 22 Apr 2020 11:29:13: 30000000 INFO @ Wed, 22 Apr 2020 11:29:17: 46000000 INFO @ Wed, 22 Apr 2020 11:29:18: 36000000 INFO @ Wed, 22 Apr 2020 11:29:19: 31000000 INFO @ Wed, 22 Apr 2020 11:29:22: 47000000 INFO @ Wed, 22 Apr 2020 11:29:23: 37000000 INFO @ Wed, 22 Apr 2020 11:29:24: 32000000 INFO @ Wed, 22 Apr 2020 11:29:26: 48000000 INFO @ Wed, 22 Apr 2020 11:29:29: 38000000 INFO @ Wed, 22 Apr 2020 11:29:29: 33000000 INFO @ Wed, 22 Apr 2020 11:29:31: 49000000 INFO @ Wed, 22 Apr 2020 11:29:34: 39000000 INFO @ Wed, 22 Apr 2020 11:29:35: 34000000 INFO @ Wed, 22 Apr 2020 11:29:36: 50000000 INFO @ Wed, 22 Apr 2020 11:29:39: 40000000 INFO @ Wed, 22 Apr 2020 11:29:40: 35000000 INFO @ Wed, 22 Apr 2020 11:29:41: 51000000 INFO @ Wed, 22 Apr 2020 11:29:45: 41000000 INFO @ Wed, 22 Apr 2020 11:29:45: 36000000 INFO @ Wed, 22 Apr 2020 11:29:46: 52000000 INFO @ Wed, 22 Apr 2020 11:29:50: 42000000 INFO @ Wed, 22 Apr 2020 11:29:50: 37000000 INFO @ Wed, 22 Apr 2020 11:29:51: 53000000 INFO @ Wed, 22 Apr 2020 11:29:55: 43000000 INFO @ Wed, 22 Apr 2020 11:29:55: 38000000 INFO @ Wed, 22 Apr 2020 11:29:56: 54000000 INFO @ Wed, 22 Apr 2020 11:30:00: 55000000 INFO @ Wed, 22 Apr 2020 11:30:01: 44000000 INFO @ Wed, 22 Apr 2020 11:30:01: 39000000 INFO @ Wed, 22 Apr 2020 11:30:05: 56000000 INFO @ Wed, 22 Apr 2020 11:30:06: 40000000 INFO @ Wed, 22 Apr 2020 11:30:06: 45000000 INFO @ Wed, 22 Apr 2020 11:30:10: 57000000 INFO @ Wed, 22 Apr 2020 11:30:11: 41000000 INFO @ Wed, 22 Apr 2020 11:30:11: 46000000 INFO @ Wed, 22 Apr 2020 11:30:15: 58000000 INFO @ Wed, 22 Apr 2020 11:30:16: 42000000 INFO @ Wed, 22 Apr 2020 11:30:17: 47000000 INFO @ Wed, 22 Apr 2020 11:30:19: 59000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 22 Apr 2020 11:30:21: 43000000 INFO @ Wed, 22 Apr 2020 11:30:22: 48000000 INFO @ Wed, 22 Apr 2020 11:30:24: 60000000 INFO @ Wed, 22 Apr 2020 11:30:27: 44000000 INFO @ Wed, 22 Apr 2020 11:30:28: 49000000 INFO @ Wed, 22 Apr 2020 11:30:29: 61000000 INFO @ Wed, 22 Apr 2020 11:30:32: 45000000 INFO @ Wed, 22 Apr 2020 11:30:33: 50000000 INFO @ Wed, 22 Apr 2020 11:30:34: 62000000 INFO @ Wed, 22 Apr 2020 11:30:37: 46000000 BigWig に変換しました。 INFO @ Wed, 22 Apr 2020 11:30:38: 63000000 INFO @ Wed, 22 Apr 2020 11:30:39: 51000000 INFO @ Wed, 22 Apr 2020 11:30:42: 47000000 INFO @ Wed, 22 Apr 2020 11:30:43: 64000000 INFO @ Wed, 22 Apr 2020 11:30:44: 52000000 INFO @ Wed, 22 Apr 2020 11:30:48: 65000000 INFO @ Wed, 22 Apr 2020 11:30:48: 48000000 INFO @ Wed, 22 Apr 2020 11:30:50: 53000000 INFO @ Wed, 22 Apr 2020 11:30:52: 66000000 INFO @ Wed, 22 Apr 2020 11:30:53: 49000000 INFO @ Wed, 22 Apr 2020 11:30:55: 54000000 INFO @ Wed, 22 Apr 2020 11:30:57: 67000000 INFO @ Wed, 22 Apr 2020 11:30:59: 50000000 INFO @ Wed, 22 Apr 2020 11:31:01: 55000000 INFO @ Wed, 22 Apr 2020 11:31:02: 68000000 INFO @ Wed, 22 Apr 2020 11:31:04: 51000000 INFO @ Wed, 22 Apr 2020 11:31:07: 56000000 INFO @ Wed, 22 Apr 2020 11:31:07: 69000000 INFO @ Wed, 22 Apr 2020 11:31:09: 52000000 INFO @ Wed, 22 Apr 2020 11:31:12: 70000000 INFO @ Wed, 22 Apr 2020 11:31:12: 57000000 INFO @ Wed, 22 Apr 2020 11:31:15: 53000000 INFO @ Wed, 22 Apr 2020 11:31:16: 71000000 INFO @ Wed, 22 Apr 2020 11:31:17: 58000000 INFO @ Wed, 22 Apr 2020 11:31:20: 54000000 INFO @ Wed, 22 Apr 2020 11:31:21: #1 tag size is determined as 50 bps INFO @ Wed, 22 Apr 2020 11:31:21: #1 tag size = 50 INFO @ Wed, 22 Apr 2020 11:31:21: #1 total tags in treatment: 35696063 INFO @ Wed, 22 Apr 2020 11:31:21: #1 user defined the maximum tags... INFO @ Wed, 22 Apr 2020 11:31:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 22 Apr 2020 11:31:22: #1 tags after filtering in treatment: 15548762 INFO @ Wed, 22 Apr 2020 11:31:22: #1 Redundant rate of treatment: 0.56 INFO @ Wed, 22 Apr 2020 11:31:22: #1 finished! INFO @ Wed, 22 Apr 2020 11:31:22: #2 Build Peak Model... INFO @ Wed, 22 Apr 2020 11:31:22: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 22 Apr 2020 11:31:23: 59000000 INFO @ Wed, 22 Apr 2020 11:31:23: #2 number of paired peaks: 0 WARNING @ Wed, 22 Apr 2020 11:31:23: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 22 Apr 2020 11:31:23: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Wed, 22 Apr 2020 11:31:26: 55000000 INFO @ Wed, 22 Apr 2020 11:31:28: 60000000 INFO @ Wed, 22 Apr 2020 11:31:31: 56000000 INFO @ Wed, 22 Apr 2020 11:31:33: 61000000 INFO @ Wed, 22 Apr 2020 11:31:36: 57000000 INFO @ Wed, 22 Apr 2020 11:31:38: 62000000 INFO @ Wed, 22 Apr 2020 11:31:41: 58000000 INFO @ Wed, 22 Apr 2020 11:31:44: 63000000 INFO @ Wed, 22 Apr 2020 11:31:47: 59000000 INFO @ Wed, 22 Apr 2020 11:31:49: 64000000 INFO @ Wed, 22 Apr 2020 11:31:52: 60000000 INFO @ Wed, 22 Apr 2020 11:31:54: 65000000 INFO @ Wed, 22 Apr 2020 11:31:57: 61000000 INFO @ Wed, 22 Apr 2020 11:31:59: 66000000 INFO @ Wed, 22 Apr 2020 11:32:02: 62000000 INFO @ Wed, 22 Apr 2020 11:32:04: 67000000 INFO @ Wed, 22 Apr 2020 11:32:08: 63000000 INFO @ Wed, 22 Apr 2020 11:32:10: 68000000 INFO @ Wed, 22 Apr 2020 11:32:13: 64000000 INFO @ Wed, 22 Apr 2020 11:32:15: 69000000 INFO @ Wed, 22 Apr 2020 11:32:18: 65000000 INFO @ Wed, 22 Apr 2020 11:32:20: 70000000 INFO @ Wed, 22 Apr 2020 11:32:23: 66000000 INFO @ Wed, 22 Apr 2020 11:32:25: 71000000 INFO @ Wed, 22 Apr 2020 11:32:28: 67000000 INFO @ Wed, 22 Apr 2020 11:32:31: #1 tag size is determined as 50 bps INFO @ Wed, 22 Apr 2020 11:32:31: #1 tag size = 50 INFO @ Wed, 22 Apr 2020 11:32:31: #1 total tags in treatment: 35696063 INFO @ Wed, 22 Apr 2020 11:32:31: #1 user defined the maximum tags... INFO @ Wed, 22 Apr 2020 11:32:31: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 22 Apr 2020 11:32:31: #1 tags after filtering in treatment: 15548762 INFO @ Wed, 22 Apr 2020 11:32:31: #1 Redundant rate of treatment: 0.56 INFO @ Wed, 22 Apr 2020 11:32:31: #1 finished! INFO @ Wed, 22 Apr 2020 11:32:31: #2 Build Peak Model... INFO @ Wed, 22 Apr 2020 11:32:31: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 22 Apr 2020 11:32:32: #2 number of paired peaks: 0 WARNING @ Wed, 22 Apr 2020 11:32:32: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 22 Apr 2020 11:32:32: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Wed, 22 Apr 2020 11:32:33: 68000000 INFO @ Wed, 22 Apr 2020 11:32:38: 69000000 INFO @ Wed, 22 Apr 2020 11:32:43: 70000000 INFO @ Wed, 22 Apr 2020 11:32:48: 71000000 INFO @ Wed, 22 Apr 2020 11:32:54: #1 tag size is determined as 50 bps INFO @ Wed, 22 Apr 2020 11:32:54: #1 tag size = 50 INFO @ Wed, 22 Apr 2020 11:32:54: #1 total tags in treatment: 35696063 INFO @ Wed, 22 Apr 2020 11:32:54: #1 user defined the maximum tags... INFO @ Wed, 22 Apr 2020 11:32:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 22 Apr 2020 11:32:54: #1 tags after filtering in treatment: 15548762 INFO @ Wed, 22 Apr 2020 11:32:54: #1 Redundant rate of treatment: 0.56 INFO @ Wed, 22 Apr 2020 11:32:54: #1 finished! INFO @ Wed, 22 Apr 2020 11:32:54: #2 Build Peak Model... INFO @ Wed, 22 Apr 2020 11:32:54: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 22 Apr 2020 11:32:55: #2 number of paired peaks: 0 WARNING @ Wed, 22 Apr 2020 11:32:55: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 22 Apr 2020 11:32:55: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX7409619/SRX7409619.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling