Job ID = 2641257 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... spots read : 12,172,823 reads read : 24,345,646 reads written : 24,345,646 spots read : 12,118,775 reads read : 24,237,550 reads written : 24,237,550 spots read : 12,579,834 reads read : 25,159,668 reads written : 25,159,668 spots read : 12,361,409 reads read : 24,722,818 reads written : 24,722,818 fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:25:23 49232841 reads; of these: 49232841 (100.00%) were paired; of these: 16258096 (33.02%) aligned concordantly 0 times 29035924 (58.98%) aligned concordantly exactly 1 time 3938821 (8.00%) aligned concordantly >1 times ---- 16258096 pairs aligned concordantly 0 times; of these: 19665 (0.12%) aligned discordantly 1 time ---- 16238431 pairs aligned 0 times concordantly or discordantly; of these: 32476862 mates make up the pairs; of these: 26067849 (80.27%) aligned 0 times 5535166 (17.04%) aligned exactly 1 time 873847 (2.69%) aligned >1 times 73.53% overall alignment rate Time searching: 00:25:23 Overall time: 00:25:23 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 1527200 / 32981314 = 0.0463 in library ' ' BAM に変換しました。 Bed ファイルを作成中... INFO @ Sat, 24 Aug 2019 23:26:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 23:26:13: #1 read tag files... INFO @ Sat, 24 Aug 2019 23:26:13: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 23:26:20: 1000000 INFO @ Sat, 24 Aug 2019 23:26:27: 2000000 INFO @ Sat, 24 Aug 2019 23:26:33: 3000000 INFO @ Sat, 24 Aug 2019 23:26:40: 4000000 INFO @ Sat, 24 Aug 2019 23:26:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 23:26:42: #1 read tag files... INFO @ Sat, 24 Aug 2019 23:26:42: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 23:26:47: 5000000 INFO @ Sat, 24 Aug 2019 23:26:49: 1000000 INFO @ Sat, 24 Aug 2019 23:26:53: 6000000 INFO @ Sat, 24 Aug 2019 23:26:57: 2000000 INFO @ Sat, 24 Aug 2019 23:27:00: 7000000 INFO @ Sat, 24 Aug 2019 23:27:04: 3000000 INFO @ Sat, 24 Aug 2019 23:27:07: 8000000 BedGraph に変換中... INFO @ Sat, 24 Aug 2019 23:27:11: 4000000 INFO @ Sat, 24 Aug 2019 23:27:12: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 23:27:12: #1 read tag files... INFO @ Sat, 24 Aug 2019 23:27:12: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 23:27:14: 9000000 INFO @ Sat, 24 Aug 2019 23:27:19: 5000000 INFO @ Sat, 24 Aug 2019 23:27:20: 1000000 INFO @ Sat, 24 Aug 2019 23:27:21: 10000000 INFO @ Sat, 24 Aug 2019 23:27:26: 6000000 INFO @ Sat, 24 Aug 2019 23:27:27: 2000000 INFO @ Sat, 24 Aug 2019 23:27:28: 11000000 INFO @ Sat, 24 Aug 2019 23:27:34: 7000000 INFO @ Sat, 24 Aug 2019 23:27:35: 3000000 INFO @ Sat, 24 Aug 2019 23:27:35: 12000000 INFO @ Sat, 24 Aug 2019 23:27:41: 8000000 INFO @ Sat, 24 Aug 2019 23:27:42: 13000000 INFO @ Sat, 24 Aug 2019 23:27:43: 4000000 INFO @ Sat, 24 Aug 2019 23:27:49: 14000000 INFO @ Sat, 24 Aug 2019 23:27:49: 9000000 INFO @ Sat, 24 Aug 2019 23:27:50: 5000000 INFO @ Sat, 24 Aug 2019 23:27:56: 15000000 INFO @ Sat, 24 Aug 2019 23:27:56: 10000000 INFO @ Sat, 24 Aug 2019 23:27:58: 6000000 INFO @ Sat, 24 Aug 2019 23:28:03: 16000000 INFO @ Sat, 24 Aug 2019 23:28:04: 11000000 INFO @ Sat, 24 Aug 2019 23:28:06: 7000000 INFO @ Sat, 24 Aug 2019 23:28:10: 17000000 INFO @ Sat, 24 Aug 2019 23:28:11: 12000000 INFO @ Sat, 24 Aug 2019 23:28:13: 8000000 INFO @ Sat, 24 Aug 2019 23:28:17: 18000000 INFO @ Sat, 24 Aug 2019 23:28:19: 13000000 INFO @ Sat, 24 Aug 2019 23:28:21: 9000000 INFO @ Sat, 24 Aug 2019 23:28:24: 19000000 INFO @ Sat, 24 Aug 2019 23:28:27: 14000000 INFO @ Sat, 24 Aug 2019 23:28:28: 10000000 INFO @ Sat, 24 Aug 2019 23:28:31: 20000000 INFO @ Sat, 24 Aug 2019 23:28:34: 15000000 INFO @ Sat, 24 Aug 2019 23:28:36: 11000000 INFO @ Sat, 24 Aug 2019 23:28:38: 21000000 INFO @ Sat, 24 Aug 2019 23:28:41: 16000000 INFO @ Sat, 24 Aug 2019 23:28:44: 12000000 INFO @ Sat, 24 Aug 2019 23:28:45: 22000000 INFO @ Sat, 24 Aug 2019 23:28:49: 17000000 INFO @ Sat, 24 Aug 2019 23:28:51: 13000000 INFO @ Sat, 24 Aug 2019 23:28:52: 23000000 INFO @ Sat, 24 Aug 2019 23:28:57: 18000000 INFO @ Sat, 24 Aug 2019 23:28:59: 24000000 INFO @ Sat, 24 Aug 2019 23:28:59: 14000000 INFO @ Sat, 24 Aug 2019 23:29:04: 19000000 INFO @ Sat, 24 Aug 2019 23:29:06: 25000000 INFO @ Sat, 24 Aug 2019 23:29:06: 15000000 INFO @ Sat, 24 Aug 2019 23:29:12: 20000000 INFO @ Sat, 24 Aug 2019 23:29:13: 26000000 INFO @ Sat, 24 Aug 2019 23:29:13: 16000000 INFO @ Sat, 24 Aug 2019 23:29:19: 21000000 INFO @ Sat, 24 Aug 2019 23:29:20: 27000000 INFO @ Sat, 24 Aug 2019 23:29:21: 17000000 INFO @ Sat, 24 Aug 2019 23:29:27: 22000000 INFO @ Sat, 24 Aug 2019 23:29:28: 28000000 INFO @ Sat, 24 Aug 2019 23:29:29: 18000000 INFO @ Sat, 24 Aug 2019 23:29:35: 29000000 INFO @ Sat, 24 Aug 2019 23:29:35: 23000000 INFO @ Sat, 24 Aug 2019 23:29:37: 19000000 INFO @ Sat, 24 Aug 2019 23:29:42: 30000000 INFO @ Sat, 24 Aug 2019 23:29:43: 24000000 INFO @ Sat, 24 Aug 2019 23:29:44: 20000000 INFO @ Sat, 24 Aug 2019 23:29:49: 31000000 INFO @ Sat, 24 Aug 2019 23:29:51: 25000000 INFO @ Sat, 24 Aug 2019 23:29:51: 21000000 INFO @ Sat, 24 Aug 2019 23:29:56: 32000000 INFO @ Sat, 24 Aug 2019 23:29:59: 26000000 INFO @ Sat, 24 Aug 2019 23:29:59: 22000000 INFO @ Sat, 24 Aug 2019 23:30:03: 33000000 INFO @ Sat, 24 Aug 2019 23:30:06: 23000000 INFO @ Sat, 24 Aug 2019 23:30:07: 27000000 INFO @ Sat, 24 Aug 2019 23:30:09: 34000000 INFO @ Sat, 24 Aug 2019 23:30:14: 24000000 INFO @ Sat, 24 Aug 2019 23:30:15: 28000000 INFO @ Sat, 24 Aug 2019 23:30:16: 35000000 INFO @ Sat, 24 Aug 2019 23:30:22: 25000000 INFO @ Sat, 24 Aug 2019 23:30:23: 29000000 INFO @ Sat, 24 Aug 2019 23:30:23: 36000000 INFO @ Sat, 24 Aug 2019 23:30:30: 26000000 INFO @ Sat, 24 Aug 2019 23:30:30: 37000000 INFO @ Sat, 24 Aug 2019 23:30:32: 30000000 INFO @ Sat, 24 Aug 2019 23:30:37: 38000000 INFO @ Sat, 24 Aug 2019 23:30:38: 27000000 INFO @ Sat, 24 Aug 2019 23:30:40: 31000000 INFO @ Sat, 24 Aug 2019 23:30:44: 39000000 INFO @ Sat, 24 Aug 2019 23:30:45: 28000000 INFO @ Sat, 24 Aug 2019 23:30:48: 32000000 INFO @ Sat, 24 Aug 2019 23:30:51: 40000000 INFO @ Sat, 24 Aug 2019 23:30:53: 29000000 INFO @ Sat, 24 Aug 2019 23:30:55: 33000000 INFO @ Sat, 24 Aug 2019 23:30:58: 41000000 INFO @ Sat, 24 Aug 2019 23:31:01: 30000000 INFO @ Sat, 24 Aug 2019 23:31:03: 34000000 INFO @ Sat, 24 Aug 2019 23:31:04: 42000000 INFO @ Sat, 24 Aug 2019 23:31:08: 31000000 INFO @ Sat, 24 Aug 2019 23:31:10: 35000000 INFO @ Sat, 24 Aug 2019 23:31:11: 43000000 INFO @ Sat, 24 Aug 2019 23:31:16: 32000000 INFO @ Sat, 24 Aug 2019 23:31:18: 44000000 INFO @ Sat, 24 Aug 2019 23:31:18: 36000000 INFO @ Sat, 24 Aug 2019 23:31:24: 33000000 INFO @ Sat, 24 Aug 2019 23:31:24: 45000000 INFO @ Sat, 24 Aug 2019 23:31:26: 37000000 INFO @ Sat, 24 Aug 2019 23:31:31: 46000000 INFO @ Sat, 24 Aug 2019 23:31:31: 34000000 INFO @ Sat, 24 Aug 2019 23:31:33: 38000000 INFO @ Sat, 24 Aug 2019 23:31:38: 47000000 INFO @ Sat, 24 Aug 2019 23:31:39: 35000000 INFO @ Sat, 24 Aug 2019 23:31:41: 39000000 INFO @ Sat, 24 Aug 2019 23:31:45: 48000000 INFO @ Sat, 24 Aug 2019 23:31:46: 36000000 INFO @ Sat, 24 Aug 2019 23:31:48: 40000000 INFO @ Sat, 24 Aug 2019 23:31:52: 49000000 INFO @ Sat, 24 Aug 2019 23:31:54: 37000000 INFO @ Sat, 24 Aug 2019 23:31:56: 41000000 INFO @ Sat, 24 Aug 2019 23:31:59: 50000000 INFO @ Sat, 24 Aug 2019 23:32:02: 38000000 INFO @ Sat, 24 Aug 2019 23:32:03: 42000000 INFO @ Sat, 24 Aug 2019 23:32:06: 51000000 INFO @ Sat, 24 Aug 2019 23:32:09: 39000000 INFO @ Sat, 24 Aug 2019 23:32:10: 43000000 INFO @ Sat, 24 Aug 2019 23:32:12: 52000000 INFO @ Sat, 24 Aug 2019 23:32:17: 40000000 INFO @ Sat, 24 Aug 2019 23:32:18: 44000000 INFO @ Sat, 24 Aug 2019 23:32:19: 53000000 INFO @ Sat, 24 Aug 2019 23:32:25: 41000000 INFO @ Sat, 24 Aug 2019 23:32:25: 45000000 INFO @ Sat, 24 Aug 2019 23:32:26: 54000000 INFO @ Sat, 24 Aug 2019 23:32:32: 55000000 INFO @ Sat, 24 Aug 2019 23:32:32: 42000000 INFO @ Sat, 24 Aug 2019 23:32:33: 46000000 INFO @ Sat, 24 Aug 2019 23:32:39: 56000000 INFO @ Sat, 24 Aug 2019 23:32:40: 43000000 INFO @ Sat, 24 Aug 2019 23:32:41: 47000000 INFO @ Sat, 24 Aug 2019 23:32:46: 57000000 INFO @ Sat, 24 Aug 2019 23:32:48: 44000000 INFO @ Sat, 24 Aug 2019 23:32:49: 48000000 INFO @ Sat, 24 Aug 2019 23:32:53: 58000000 INFO @ Sat, 24 Aug 2019 23:32:55: 45000000 INFO @ Sat, 24 Aug 2019 23:32:56: 49000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 24 Aug 2019 23:33:01: 59000000 INFO @ Sat, 24 Aug 2019 23:33:03: 46000000 INFO @ Sat, 24 Aug 2019 23:33:04: 50000000 INFO @ Sat, 24 Aug 2019 23:33:08: 60000000 INFO @ Sat, 24 Aug 2019 23:33:11: 47000000 INFO @ Sat, 24 Aug 2019 23:33:12: 51000000 INFO @ Sat, 24 Aug 2019 23:33:14: 61000000 INFO @ Sat, 24 Aug 2019 23:33:19: 48000000 INFO @ Sat, 24 Aug 2019 23:33:19: 52000000 INFO @ Sat, 24 Aug 2019 23:33:21: 62000000 BigWig に変換しました。 INFO @ Sat, 24 Aug 2019 23:33:26: 49000000 INFO @ Sat, 24 Aug 2019 23:33:27: 53000000 INFO @ Sat, 24 Aug 2019 23:33:28: 63000000 INFO @ Sat, 24 Aug 2019 23:33:34: 50000000 INFO @ Sat, 24 Aug 2019 23:33:34: 54000000 INFO @ Sat, 24 Aug 2019 23:33:35: 64000000 INFO @ Sat, 24 Aug 2019 23:33:41: 51000000 INFO @ Sat, 24 Aug 2019 23:33:42: 55000000 INFO @ Sat, 24 Aug 2019 23:33:42: 65000000 INFO @ Sat, 24 Aug 2019 23:33:49: 56000000 INFO @ Sat, 24 Aug 2019 23:33:49: 52000000 INFO @ Sat, 24 Aug 2019 23:33:49: 66000000 INFO @ Sat, 24 Aug 2019 23:33:56: 67000000 INFO @ Sat, 24 Aug 2019 23:33:56: 57000000 INFO @ Sat, 24 Aug 2019 23:33:56: 53000000 INFO @ Sat, 24 Aug 2019 23:34:03: 68000000 INFO @ Sat, 24 Aug 2019 23:34:03: 58000000 INFO @ Sat, 24 Aug 2019 23:34:04: 54000000 INFO @ Sat, 24 Aug 2019 23:34:09: 69000000 INFO @ Sat, 24 Aug 2019 23:34:11: 59000000 INFO @ Sat, 24 Aug 2019 23:34:11: 55000000 INFO @ Sat, 24 Aug 2019 23:34:12: #1 tag size is determined as 35 bps INFO @ Sat, 24 Aug 2019 23:34:12: #1 tag size = 35 INFO @ Sat, 24 Aug 2019 23:34:12: #1 total tags in treatment: 31447671 INFO @ Sat, 24 Aug 2019 23:34:12: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 23:34:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 23:34:13: #1 tags after filtering in treatment: 16140341 INFO @ Sat, 24 Aug 2019 23:34:13: #1 Redundant rate of treatment: 0.49 INFO @ Sat, 24 Aug 2019 23:34:13: #1 finished! INFO @ Sat, 24 Aug 2019 23:34:13: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 23:34:13: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 23:34:14: #2 number of paired peaks: 0 WARNING @ Sat, 24 Aug 2019 23:34:14: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sat, 24 Aug 2019 23:34:14: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sat, 24 Aug 2019 23:34:18: 60000000 INFO @ Sat, 24 Aug 2019 23:34:19: 56000000 INFO @ Sat, 24 Aug 2019 23:34:26: 61000000 INFO @ Sat, 24 Aug 2019 23:34:26: 57000000 INFO @ Sat, 24 Aug 2019 23:34:33: 62000000 INFO @ Sat, 24 Aug 2019 23:34:34: 58000000 INFO @ Sat, 24 Aug 2019 23:34:40: 63000000 INFO @ Sat, 24 Aug 2019 23:34:41: 59000000 INFO @ Sat, 24 Aug 2019 23:34:47: 64000000 INFO @ Sat, 24 Aug 2019 23:34:48: 60000000 INFO @ Sat, 24 Aug 2019 23:34:54: 65000000 INFO @ Sat, 24 Aug 2019 23:34:55: 61000000 INFO @ Sat, 24 Aug 2019 23:35:01: 66000000 INFO @ Sat, 24 Aug 2019 23:35:02: 62000000 INFO @ Sat, 24 Aug 2019 23:35:07: 67000000 INFO @ Sat, 24 Aug 2019 23:35:09: 63000000 INFO @ Sat, 24 Aug 2019 23:35:14: 68000000 INFO @ Sat, 24 Aug 2019 23:35:16: 64000000 INFO @ Sat, 24 Aug 2019 23:35:21: 69000000 INFO @ Sat, 24 Aug 2019 23:35:23: 65000000 INFO @ Sat, 24 Aug 2019 23:35:24: #1 tag size is determined as 35 bps INFO @ Sat, 24 Aug 2019 23:35:24: #1 tag size = 35 INFO @ Sat, 24 Aug 2019 23:35:24: #1 total tags in treatment: 31447671 INFO @ Sat, 24 Aug 2019 23:35:24: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 23:35:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 23:35:25: #1 tags after filtering in treatment: 16140341 INFO @ Sat, 24 Aug 2019 23:35:25: #1 Redundant rate of treatment: 0.49 INFO @ Sat, 24 Aug 2019 23:35:25: #1 finished! INFO @ Sat, 24 Aug 2019 23:35:25: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 23:35:25: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 23:35:26: #2 number of paired peaks: 0 WARNING @ Sat, 24 Aug 2019 23:35:26: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sat, 24 Aug 2019 23:35:26: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sat, 24 Aug 2019 23:35:29: 66000000 INFO @ Sat, 24 Aug 2019 23:35:35: 67000000 INFO @ Sat, 24 Aug 2019 23:35:42: 68000000 INFO @ Sat, 24 Aug 2019 23:35:48: 69000000 INFO @ Sat, 24 Aug 2019 23:35:51: #1 tag size is determined as 35 bps INFO @ Sat, 24 Aug 2019 23:35:51: #1 tag size = 35 INFO @ Sat, 24 Aug 2019 23:35:51: #1 total tags in treatment: 31447671 INFO @ Sat, 24 Aug 2019 23:35:51: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 23:35:51: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 23:35:52: #1 tags after filtering in treatment: 16140341 INFO @ Sat, 24 Aug 2019 23:35:52: #1 Redundant rate of treatment: 0.49 INFO @ Sat, 24 Aug 2019 23:35:52: #1 finished! INFO @ Sat, 24 Aug 2019 23:35:52: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 23:35:52: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 23:35:53: #2 number of paired peaks: 0 WARNING @ Sat, 24 Aug 2019 23:35:53: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sat, 24 Aug 2019 23:35:53: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403232/SRX6403232.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling