Job ID = 2641254 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... spots read : 22,094,687 reads read : 44,189,374 reads written : 44,189,374 spots read : 22,079,934 reads read : 44,159,868 reads written : 44,159,868 2019-08-24T13:34:27 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T13:34:27 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 22,798,235 reads read : 45,596,470 reads written : 45,596,470 spots read : 22,412,118 reads read : 44,824,236 reads written : 44,824,236 fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:41:28 89384974 reads; of these: 89384974 (100.00%) were paired; of these: 29801928 (33.34%) aligned concordantly 0 times 52458873 (58.69%) aligned concordantly exactly 1 time 7124173 (7.97%) aligned concordantly >1 times ---- 29801928 pairs aligned concordantly 0 times; of these: 64128 (0.22%) aligned discordantly 1 time ---- 29737800 pairs aligned 0 times concordantly or discordantly; of these: 59475600 mates make up the pairs; of these: 48018891 (80.74%) aligned 0 times 9863791 (16.58%) aligned exactly 1 time 1592918 (2.68%) aligned >1 times 73.14% overall alignment rate Time searching: 00:41:28 Overall time: 00:41:28 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 4291869 / 59631570 = 0.0720 in library ' ' BAM に変換しました。 Bed ファイルを作成中... INFO @ Sun, 25 Aug 2019 00:09:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 25 Aug 2019 00:09:55: #1 read tag files... INFO @ Sun, 25 Aug 2019 00:09:55: #1 read treatment tags... INFO @ Sun, 25 Aug 2019 00:10:04: 1000000 INFO @ Sun, 25 Aug 2019 00:10:13: 2000000 INFO @ Sun, 25 Aug 2019 00:10:22: 3000000 INFO @ Sun, 25 Aug 2019 00:10:25: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 25 Aug 2019 00:10:25: #1 read tag files... INFO @ Sun, 25 Aug 2019 00:10:25: #1 read treatment tags... INFO @ Sun, 25 Aug 2019 00:10:31: 4000000 INFO @ Sun, 25 Aug 2019 00:10:32: 1000000 INFO @ Sun, 25 Aug 2019 00:10:38: 2000000 INFO @ Sun, 25 Aug 2019 00:10:40: 5000000 INFO @ Sun, 25 Aug 2019 00:10:44: 3000000 INFO @ Sun, 25 Aug 2019 00:10:49: 6000000 INFO @ Sun, 25 Aug 2019 00:10:50: 4000000 BedGraph に変換中... INFO @ Sun, 25 Aug 2019 00:10:55: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sun, 25 Aug 2019 00:10:55: #1 read tag files... INFO @ Sun, 25 Aug 2019 00:10:55: #1 read treatment tags... INFO @ Sun, 25 Aug 2019 00:10:57: 5000000 INFO @ Sun, 25 Aug 2019 00:10:58: 7000000 INFO @ Sun, 25 Aug 2019 00:11:03: 1000000 INFO @ Sun, 25 Aug 2019 00:11:03: 6000000 INFO @ Sun, 25 Aug 2019 00:11:07: 8000000 INFO @ Sun, 25 Aug 2019 00:11:10: 7000000 INFO @ Sun, 25 Aug 2019 00:11:10: 2000000 INFO @ Sun, 25 Aug 2019 00:11:16: 8000000 INFO @ Sun, 25 Aug 2019 00:11:16: 9000000 INFO @ Sun, 25 Aug 2019 00:11:17: 3000000 INFO @ Sun, 25 Aug 2019 00:11:22: 9000000 INFO @ Sun, 25 Aug 2019 00:11:25: 4000000 INFO @ Sun, 25 Aug 2019 00:11:26: 10000000 INFO @ Sun, 25 Aug 2019 00:11:29: 10000000 INFO @ Sun, 25 Aug 2019 00:11:32: 5000000 INFO @ Sun, 25 Aug 2019 00:11:35: 11000000 INFO @ Sun, 25 Aug 2019 00:11:35: 11000000 INFO @ Sun, 25 Aug 2019 00:11:39: 6000000 INFO @ Sun, 25 Aug 2019 00:11:41: 12000000 INFO @ Sun, 25 Aug 2019 00:11:44: 12000000 INFO @ Sun, 25 Aug 2019 00:11:47: 7000000 INFO @ Sun, 25 Aug 2019 00:11:48: 13000000 INFO @ Sun, 25 Aug 2019 00:11:53: 13000000 INFO @ Sun, 25 Aug 2019 00:11:54: 8000000 INFO @ Sun, 25 Aug 2019 00:11:54: 14000000 INFO @ Sun, 25 Aug 2019 00:12:00: 15000000 INFO @ Sun, 25 Aug 2019 00:12:01: 9000000 INFO @ Sun, 25 Aug 2019 00:12:02: 14000000 INFO @ Sun, 25 Aug 2019 00:12:07: 16000000 INFO @ Sun, 25 Aug 2019 00:12:08: 10000000 INFO @ Sun, 25 Aug 2019 00:12:11: 15000000 INFO @ Sun, 25 Aug 2019 00:12:13: 17000000 INFO @ Sun, 25 Aug 2019 00:12:16: 11000000 INFO @ Sun, 25 Aug 2019 00:12:19: 18000000 INFO @ Sun, 25 Aug 2019 00:12:20: 16000000 INFO @ Sun, 25 Aug 2019 00:12:23: 12000000 INFO @ Sun, 25 Aug 2019 00:12:26: 19000000 INFO @ Sun, 25 Aug 2019 00:12:28: 17000000 INFO @ Sun, 25 Aug 2019 00:12:30: 13000000 INFO @ Sun, 25 Aug 2019 00:12:32: 20000000 INFO @ Sun, 25 Aug 2019 00:12:37: 14000000 INFO @ Sun, 25 Aug 2019 00:12:37: 18000000 INFO @ Sun, 25 Aug 2019 00:12:38: 21000000 INFO @ Sun, 25 Aug 2019 00:12:44: 15000000 INFO @ Sun, 25 Aug 2019 00:12:45: 22000000 INFO @ Sun, 25 Aug 2019 00:12:46: 19000000 INFO @ Sun, 25 Aug 2019 00:12:51: 23000000 INFO @ Sun, 25 Aug 2019 00:12:51: 16000000 INFO @ Sun, 25 Aug 2019 00:12:55: 20000000 INFO @ Sun, 25 Aug 2019 00:12:57: 24000000 INFO @ Sun, 25 Aug 2019 00:12:58: 17000000 INFO @ Sun, 25 Aug 2019 00:13:03: 25000000 INFO @ Sun, 25 Aug 2019 00:13:04: 21000000 INFO @ Sun, 25 Aug 2019 00:13:06: 18000000 INFO @ Sun, 25 Aug 2019 00:13:10: 26000000 INFO @ Sun, 25 Aug 2019 00:13:13: 19000000 INFO @ Sun, 25 Aug 2019 00:13:13: 22000000 INFO @ Sun, 25 Aug 2019 00:13:16: 27000000 INFO @ Sun, 25 Aug 2019 00:13:20: 20000000 INFO @ Sun, 25 Aug 2019 00:13:22: 23000000 INFO @ Sun, 25 Aug 2019 00:13:22: 28000000 INFO @ Sun, 25 Aug 2019 00:13:27: 21000000 INFO @ Sun, 25 Aug 2019 00:13:29: 29000000 INFO @ Sun, 25 Aug 2019 00:13:31: 24000000 INFO @ Sun, 25 Aug 2019 00:13:34: 22000000 INFO @ Sun, 25 Aug 2019 00:13:35: 30000000 INFO @ Sun, 25 Aug 2019 00:13:40: 25000000 INFO @ Sun, 25 Aug 2019 00:13:41: 31000000 INFO @ Sun, 25 Aug 2019 00:13:41: 23000000 INFO @ Sun, 25 Aug 2019 00:13:47: 32000000 INFO @ Sun, 25 Aug 2019 00:13:48: 24000000 INFO @ Sun, 25 Aug 2019 00:13:49: 26000000 INFO @ Sun, 25 Aug 2019 00:13:53: 33000000 INFO @ Sun, 25 Aug 2019 00:13:55: 25000000 INFO @ Sun, 25 Aug 2019 00:13:58: 27000000 INFO @ Sun, 25 Aug 2019 00:14:00: 34000000 INFO @ Sun, 25 Aug 2019 00:14:03: 26000000 INFO @ Sun, 25 Aug 2019 00:14:06: 35000000 INFO @ Sun, 25 Aug 2019 00:14:07: 28000000 INFO @ Sun, 25 Aug 2019 00:14:10: 27000000 INFO @ Sun, 25 Aug 2019 00:14:12: 36000000 INFO @ Sun, 25 Aug 2019 00:14:16: 29000000 INFO @ Sun, 25 Aug 2019 00:14:17: 28000000 INFO @ Sun, 25 Aug 2019 00:14:18: 37000000 INFO @ Sun, 25 Aug 2019 00:14:24: 29000000 INFO @ Sun, 25 Aug 2019 00:14:24: 38000000 INFO @ Sun, 25 Aug 2019 00:14:25: 30000000 INFO @ Sun, 25 Aug 2019 00:14:31: 39000000 INFO @ Sun, 25 Aug 2019 00:14:31: 30000000 INFO @ Sun, 25 Aug 2019 00:14:33: 31000000 INFO @ Sun, 25 Aug 2019 00:14:37: 40000000 INFO @ Sun, 25 Aug 2019 00:14:38: 31000000 INFO @ Sun, 25 Aug 2019 00:14:42: 32000000 INFO @ Sun, 25 Aug 2019 00:14:43: 41000000 INFO @ Sun, 25 Aug 2019 00:14:45: 32000000 INFO @ Sun, 25 Aug 2019 00:14:49: 42000000 INFO @ Sun, 25 Aug 2019 00:14:51: 33000000 INFO @ Sun, 25 Aug 2019 00:14:52: 33000000 INFO @ Sun, 25 Aug 2019 00:14:56: 43000000 INFO @ Sun, 25 Aug 2019 00:14:59: 34000000 INFO @ Sun, 25 Aug 2019 00:15:00: 34000000 INFO @ Sun, 25 Aug 2019 00:15:02: 44000000 INFO @ Sun, 25 Aug 2019 00:15:06: 35000000 INFO @ Sun, 25 Aug 2019 00:15:08: 45000000 INFO @ Sun, 25 Aug 2019 00:15:08: 35000000 INFO @ Sun, 25 Aug 2019 00:15:13: 36000000 INFO @ Sun, 25 Aug 2019 00:15:14: 46000000 INFO @ Sun, 25 Aug 2019 00:15:17: 36000000 INFO @ Sun, 25 Aug 2019 00:15:20: 37000000 INFO @ Sun, 25 Aug 2019 00:15:21: 47000000 INFO @ Sun, 25 Aug 2019 00:15:26: 37000000 INFO @ Sun, 25 Aug 2019 00:15:27: 48000000 INFO @ Sun, 25 Aug 2019 00:15:27: 38000000 INFO @ Sun, 25 Aug 2019 00:15:33: 49000000 INFO @ Sun, 25 Aug 2019 00:15:34: 39000000 INFO @ Sun, 25 Aug 2019 00:15:35: 38000000 INFO @ Sun, 25 Aug 2019 00:15:39: 50000000 INFO @ Sun, 25 Aug 2019 00:15:41: 40000000 INFO @ Sun, 25 Aug 2019 00:15:43: 39000000 INFO @ Sun, 25 Aug 2019 00:15:46: 51000000 INFO @ Sun, 25 Aug 2019 00:15:48: 41000000 INFO @ Sun, 25 Aug 2019 00:15:52: 52000000 INFO @ Sun, 25 Aug 2019 00:15:52: 40000000 INFO @ Sun, 25 Aug 2019 00:15:55: 42000000 INFO @ Sun, 25 Aug 2019 00:15:58: 53000000 INFO @ Sun, 25 Aug 2019 00:16:01: 41000000 INFO @ Sun, 25 Aug 2019 00:16:02: 43000000 INFO @ Sun, 25 Aug 2019 00:16:04: 54000000 INFO @ Sun, 25 Aug 2019 00:16:10: 44000000 INFO @ Sun, 25 Aug 2019 00:16:10: 42000000 INFO @ Sun, 25 Aug 2019 00:16:11: 55000000 INFO @ Sun, 25 Aug 2019 00:16:17: 45000000 INFO @ Sun, 25 Aug 2019 00:16:17: 56000000 INFO @ Sun, 25 Aug 2019 00:16:19: 43000000 INFO @ Sun, 25 Aug 2019 00:16:23: 57000000 INFO @ Sun, 25 Aug 2019 00:16:24: 46000000 INFO @ Sun, 25 Aug 2019 00:16:27: 44000000 INFO @ Sun, 25 Aug 2019 00:16:29: 58000000 INFO @ Sun, 25 Aug 2019 00:16:31: 47000000 INFO @ Sun, 25 Aug 2019 00:16:36: 59000000 INFO @ Sun, 25 Aug 2019 00:16:36: 45000000 INFO @ Sun, 25 Aug 2019 00:16:38: 48000000 INFO @ Sun, 25 Aug 2019 00:16:42: 60000000 INFO @ Sun, 25 Aug 2019 00:16:45: 49000000 INFO @ Sun, 25 Aug 2019 00:16:45: 46000000 INFO @ Sun, 25 Aug 2019 00:16:48: 61000000 INFO @ Sun, 25 Aug 2019 00:16:52: 50000000 INFO @ Sun, 25 Aug 2019 00:16:54: 47000000 INFO @ Sun, 25 Aug 2019 00:16:54: 62000000 INFO @ Sun, 25 Aug 2019 00:16:59: 51000000 INFO @ Sun, 25 Aug 2019 00:17:01: 63000000 INFO @ Sun, 25 Aug 2019 00:17:02: 48000000 INFO @ Sun, 25 Aug 2019 00:17:06: 52000000 INFO @ Sun, 25 Aug 2019 00:17:07: 64000000 INFO @ Sun, 25 Aug 2019 00:17:11: 49000000 INFO @ Sun, 25 Aug 2019 00:17:13: 65000000 INFO @ Sun, 25 Aug 2019 00:17:13: 53000000 INFO @ Sun, 25 Aug 2019 00:17:19: 66000000 INFO @ Sun, 25 Aug 2019 00:17:20: 50000000 INFO @ Sun, 25 Aug 2019 00:17:20: 54000000 INFO @ Sun, 25 Aug 2019 00:17:25: 67000000 INFO @ Sun, 25 Aug 2019 00:17:27: 55000000 INFO @ Sun, 25 Aug 2019 00:17:29: 51000000 INFO @ Sun, 25 Aug 2019 00:17:32: 68000000 INFO @ Sun, 25 Aug 2019 00:17:34: 56000000 INFO @ Sun, 25 Aug 2019 00:17:37: 52000000 INFO @ Sun, 25 Aug 2019 00:17:38: 69000000 INFO @ Sun, 25 Aug 2019 00:17:41: 57000000 INFO @ Sun, 25 Aug 2019 00:17:44: 70000000 INFO @ Sun, 25 Aug 2019 00:17:46: 53000000 INFO @ Sun, 25 Aug 2019 00:17:48: 58000000 INFO @ Sun, 25 Aug 2019 00:17:50: 71000000 INFO @ Sun, 25 Aug 2019 00:17:55: 54000000 INFO @ Sun, 25 Aug 2019 00:17:55: 59000000 INFO @ Sun, 25 Aug 2019 00:17:56: 72000000 INFO @ Sun, 25 Aug 2019 00:18:02: 60000000 INFO @ Sun, 25 Aug 2019 00:18:03: 73000000 INFO @ Sun, 25 Aug 2019 00:18:04: 55000000 INFO @ Sun, 25 Aug 2019 00:18:09: 74000000 INFO @ Sun, 25 Aug 2019 00:18:10: 61000000 INFO @ Sun, 25 Aug 2019 00:18:13: 56000000 INFO @ Sun, 25 Aug 2019 00:18:15: 75000000 INFO @ Sun, 25 Aug 2019 00:18:17: 62000000 INFO @ Sun, 25 Aug 2019 00:18:21: 76000000 INFO @ Sun, 25 Aug 2019 00:18:21: 57000000 INFO @ Sun, 25 Aug 2019 00:18:24: 63000000 INFO @ Sun, 25 Aug 2019 00:18:27: 77000000 INFO @ Sun, 25 Aug 2019 00:18:30: 58000000 INFO @ Sun, 25 Aug 2019 00:18:31: 64000000 INFO @ Sun, 25 Aug 2019 00:18:34: 78000000 INFO @ Sun, 25 Aug 2019 00:18:38: 65000000 INFO @ Sun, 25 Aug 2019 00:18:39: 59000000 INFO @ Sun, 25 Aug 2019 00:18:40: 79000000 INFO @ Sun, 25 Aug 2019 00:18:45: 66000000 INFO @ Sun, 25 Aug 2019 00:18:46: 80000000 INFO @ Sun, 25 Aug 2019 00:18:48: 60000000 INFO @ Sun, 25 Aug 2019 00:18:52: 81000000 INFO @ Sun, 25 Aug 2019 00:18:52: 67000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sun, 25 Aug 2019 00:18:56: 61000000 INFO @ Sun, 25 Aug 2019 00:18:58: 82000000 INFO @ Sun, 25 Aug 2019 00:18:59: 68000000 INFO @ Sun, 25 Aug 2019 00:19:04: 83000000 INFO @ Sun, 25 Aug 2019 00:19:05: 62000000 INFO @ Sun, 25 Aug 2019 00:19:06: 69000000 INFO @ Sun, 25 Aug 2019 00:19:10: 84000000 INFO @ Sun, 25 Aug 2019 00:19:13: 70000000 INFO @ Sun, 25 Aug 2019 00:19:14: 63000000 INFO @ Sun, 25 Aug 2019 00:19:16: 85000000 INFO @ Sun, 25 Aug 2019 00:19:20: 71000000 BigWig に変換しました。 INFO @ Sun, 25 Aug 2019 00:19:22: 86000000 INFO @ Sun, 25 Aug 2019 00:19:23: 64000000 INFO @ Sun, 25 Aug 2019 00:19:27: 72000000 INFO @ Sun, 25 Aug 2019 00:19:28: 87000000 INFO @ Sun, 25 Aug 2019 00:19:31: 65000000 INFO @ Sun, 25 Aug 2019 00:19:34: 73000000 INFO @ Sun, 25 Aug 2019 00:19:34: 88000000 INFO @ Sun, 25 Aug 2019 00:19:40: 66000000 INFO @ Sun, 25 Aug 2019 00:19:41: 89000000 INFO @ Sun, 25 Aug 2019 00:19:41: 74000000 INFO @ Sun, 25 Aug 2019 00:19:47: 90000000 INFO @ Sun, 25 Aug 2019 00:19:48: 75000000 INFO @ Sun, 25 Aug 2019 00:19:49: 67000000 INFO @ Sun, 25 Aug 2019 00:19:53: 91000000 INFO @ Sun, 25 Aug 2019 00:19:55: 76000000 INFO @ Sun, 25 Aug 2019 00:19:57: 68000000 INFO @ Sun, 25 Aug 2019 00:19:59: 92000000 INFO @ Sun, 25 Aug 2019 00:20:02: 77000000 INFO @ Sun, 25 Aug 2019 00:20:05: 93000000 INFO @ Sun, 25 Aug 2019 00:20:06: 69000000 INFO @ Sun, 25 Aug 2019 00:20:09: 78000000 INFO @ Sun, 25 Aug 2019 00:20:11: 94000000 INFO @ Sun, 25 Aug 2019 00:20:15: 70000000 INFO @ Sun, 25 Aug 2019 00:20:16: 79000000 INFO @ Sun, 25 Aug 2019 00:20:17: 95000000 INFO @ Sun, 25 Aug 2019 00:20:23: 80000000 INFO @ Sun, 25 Aug 2019 00:20:23: 71000000 INFO @ Sun, 25 Aug 2019 00:20:24: 96000000 INFO @ Sun, 25 Aug 2019 00:20:29: 81000000 INFO @ Sun, 25 Aug 2019 00:20:30: 97000000 INFO @ Sun, 25 Aug 2019 00:20:32: 72000000 INFO @ Sun, 25 Aug 2019 00:20:36: 98000000 INFO @ Sun, 25 Aug 2019 00:20:36: 82000000 INFO @ Sun, 25 Aug 2019 00:20:41: 73000000 INFO @ Sun, 25 Aug 2019 00:20:42: 99000000 INFO @ Sun, 25 Aug 2019 00:20:43: 83000000 INFO @ Sun, 25 Aug 2019 00:20:48: 100000000 INFO @ Sun, 25 Aug 2019 00:20:49: 74000000 INFO @ Sun, 25 Aug 2019 00:20:50: 84000000 INFO @ Sun, 25 Aug 2019 00:20:54: 101000000 INFO @ Sun, 25 Aug 2019 00:20:57: 85000000 INFO @ Sun, 25 Aug 2019 00:20:58: 75000000 INFO @ Sun, 25 Aug 2019 00:21:01: 102000000 INFO @ Sun, 25 Aug 2019 00:21:04: 86000000 INFO @ Sun, 25 Aug 2019 00:21:07: 76000000 INFO @ Sun, 25 Aug 2019 00:21:07: 103000000 INFO @ Sun, 25 Aug 2019 00:21:11: 87000000 INFO @ Sun, 25 Aug 2019 00:21:13: 104000000 INFO @ Sun, 25 Aug 2019 00:21:15: 77000000 INFO @ Sun, 25 Aug 2019 00:21:18: 88000000 INFO @ Sun, 25 Aug 2019 00:21:19: 105000000 INFO @ Sun, 25 Aug 2019 00:21:24: 78000000 INFO @ Sun, 25 Aug 2019 00:21:25: 89000000 INFO @ Sun, 25 Aug 2019 00:21:25: 106000000 INFO @ Sun, 25 Aug 2019 00:21:31: 107000000 INFO @ Sun, 25 Aug 2019 00:21:32: 90000000 INFO @ Sun, 25 Aug 2019 00:21:33: 79000000 INFO @ Sun, 25 Aug 2019 00:21:37: 108000000 INFO @ Sun, 25 Aug 2019 00:21:38: 91000000 INFO @ Sun, 25 Aug 2019 00:21:41: 80000000 INFO @ Sun, 25 Aug 2019 00:21:43: 109000000 INFO @ Sun, 25 Aug 2019 00:21:45: 92000000 INFO @ Sun, 25 Aug 2019 00:21:49: 81000000 INFO @ Sun, 25 Aug 2019 00:21:50: 110000000 INFO @ Sun, 25 Aug 2019 00:21:52: 93000000 INFO @ Sun, 25 Aug 2019 00:21:56: 111000000 INFO @ Sun, 25 Aug 2019 00:21:58: 82000000 INFO @ Sun, 25 Aug 2019 00:21:59: 94000000 INFO @ Sun, 25 Aug 2019 00:22:02: 112000000 INFO @ Sun, 25 Aug 2019 00:22:06: 95000000 INFO @ Sun, 25 Aug 2019 00:22:06: 83000000 INFO @ Sun, 25 Aug 2019 00:22:08: 113000000 INFO @ Sun, 25 Aug 2019 00:22:13: 96000000 INFO @ Sun, 25 Aug 2019 00:22:14: 114000000 INFO @ Sun, 25 Aug 2019 00:22:15: 84000000 INFO @ Sun, 25 Aug 2019 00:22:20: 97000000 INFO @ Sun, 25 Aug 2019 00:22:20: 115000000 INFO @ Sun, 25 Aug 2019 00:22:23: 85000000 INFO @ Sun, 25 Aug 2019 00:22:26: 116000000 INFO @ Sun, 25 Aug 2019 00:22:27: 98000000 INFO @ Sun, 25 Aug 2019 00:22:32: 86000000 INFO @ Sun, 25 Aug 2019 00:22:32: 117000000 INFO @ Sun, 25 Aug 2019 00:22:33: 99000000 INFO @ Sun, 25 Aug 2019 00:22:38: 118000000 INFO @ Sun, 25 Aug 2019 00:22:40: 87000000 INFO @ Sun, 25 Aug 2019 00:22:40: 100000000 INFO @ Sun, 25 Aug 2019 00:22:45: 119000000 INFO @ Sun, 25 Aug 2019 00:22:47: 101000000 INFO @ Sun, 25 Aug 2019 00:22:49: 88000000 INFO @ Sun, 25 Aug 2019 00:22:51: 120000000 INFO @ Sun, 25 Aug 2019 00:22:54: 102000000 INFO @ Sun, 25 Aug 2019 00:22:57: 121000000 INFO @ Sun, 25 Aug 2019 00:22:57: 89000000 INFO @ Sun, 25 Aug 2019 00:23:01: 103000000 INFO @ Sun, 25 Aug 2019 00:23:03: 122000000 INFO @ Sun, 25 Aug 2019 00:23:05: #1 tag size is determined as 35 bps INFO @ Sun, 25 Aug 2019 00:23:05: #1 tag size = 35 INFO @ Sun, 25 Aug 2019 00:23:05: #1 total tags in treatment: 55292723 INFO @ Sun, 25 Aug 2019 00:23:05: #1 user defined the maximum tags... INFO @ Sun, 25 Aug 2019 00:23:05: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 25 Aug 2019 00:23:05: 90000000 INFO @ Sun, 25 Aug 2019 00:23:06: #1 tags after filtering in treatment: 19826310 INFO @ Sun, 25 Aug 2019 00:23:06: #1 Redundant rate of treatment: 0.64 INFO @ Sun, 25 Aug 2019 00:23:06: #1 finished! INFO @ Sun, 25 Aug 2019 00:23:06: #2 Build Peak Model... INFO @ Sun, 25 Aug 2019 00:23:06: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 25 Aug 2019 00:23:08: 104000000 INFO @ Sun, 25 Aug 2019 00:23:08: #2 number of paired peaks: 0 WARNING @ Sun, 25 Aug 2019 00:23:08: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 25 Aug 2019 00:23:08: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sun, 25 Aug 2019 00:23:14: 91000000 INFO @ Sun, 25 Aug 2019 00:23:14: 105000000 INFO @ Sun, 25 Aug 2019 00:23:21: 106000000 INFO @ Sun, 25 Aug 2019 00:23:22: 92000000 INFO @ Sun, 25 Aug 2019 00:23:28: 107000000 INFO @ Sun, 25 Aug 2019 00:23:31: 93000000 INFO @ Sun, 25 Aug 2019 00:23:35: 108000000 INFO @ Sun, 25 Aug 2019 00:23:39: 94000000 INFO @ Sun, 25 Aug 2019 00:23:41: 109000000 INFO @ Sun, 25 Aug 2019 00:23:47: 95000000 INFO @ Sun, 25 Aug 2019 00:23:48: 110000000 INFO @ Sun, 25 Aug 2019 00:23:55: 111000000 INFO @ Sun, 25 Aug 2019 00:23:56: 96000000 INFO @ Sun, 25 Aug 2019 00:24:02: 112000000 INFO @ Sun, 25 Aug 2019 00:24:04: 97000000 INFO @ Sun, 25 Aug 2019 00:24:09: 113000000 INFO @ Sun, 25 Aug 2019 00:24:12: 98000000 INFO @ Sun, 25 Aug 2019 00:24:15: 114000000 INFO @ Sun, 25 Aug 2019 00:24:21: 99000000 INFO @ Sun, 25 Aug 2019 00:24:22: 115000000 INFO @ Sun, 25 Aug 2019 00:24:29: 116000000 INFO @ Sun, 25 Aug 2019 00:24:29: 100000000 INFO @ Sun, 25 Aug 2019 00:24:36: 117000000 INFO @ Sun, 25 Aug 2019 00:24:38: 101000000 INFO @ Sun, 25 Aug 2019 00:24:43: 118000000 INFO @ Sun, 25 Aug 2019 00:24:46: 102000000 INFO @ Sun, 25 Aug 2019 00:24:49: 119000000 INFO @ Sun, 25 Aug 2019 00:24:54: 103000000 INFO @ Sun, 25 Aug 2019 00:24:56: 120000000 INFO @ Sun, 25 Aug 2019 00:25:03: 104000000 INFO @ Sun, 25 Aug 2019 00:25:03: 121000000 INFO @ Sun, 25 Aug 2019 00:25:10: 122000000 INFO @ Sun, 25 Aug 2019 00:25:11: 105000000 INFO @ Sun, 25 Aug 2019 00:25:12: #1 tag size is determined as 35 bps INFO @ Sun, 25 Aug 2019 00:25:12: #1 tag size = 35 INFO @ Sun, 25 Aug 2019 00:25:12: #1 total tags in treatment: 55292723 INFO @ Sun, 25 Aug 2019 00:25:12: #1 user defined the maximum tags... INFO @ Sun, 25 Aug 2019 00:25:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 25 Aug 2019 00:25:13: #1 tags after filtering in treatment: 19826310 INFO @ Sun, 25 Aug 2019 00:25:13: #1 Redundant rate of treatment: 0.64 INFO @ Sun, 25 Aug 2019 00:25:13: #1 finished! INFO @ Sun, 25 Aug 2019 00:25:13: #2 Build Peak Model... INFO @ Sun, 25 Aug 2019 00:25:13: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 25 Aug 2019 00:25:15: #2 number of paired peaks: 0 WARNING @ Sun, 25 Aug 2019 00:25:15: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 25 Aug 2019 00:25:15: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sun, 25 Aug 2019 00:25:19: 106000000 INFO @ Sun, 25 Aug 2019 00:25:27: 107000000 INFO @ Sun, 25 Aug 2019 00:25:35: 108000000 INFO @ Sun, 25 Aug 2019 00:25:43: 109000000 INFO @ Sun, 25 Aug 2019 00:25:51: 110000000 INFO @ Sun, 25 Aug 2019 00:25:59: 111000000 INFO @ Sun, 25 Aug 2019 00:26:08: 112000000 INFO @ Sun, 25 Aug 2019 00:26:16: 113000000 INFO @ Sun, 25 Aug 2019 00:26:24: 114000000 INFO @ Sun, 25 Aug 2019 00:26:32: 115000000 INFO @ Sun, 25 Aug 2019 00:26:40: 116000000 INFO @ Sun, 25 Aug 2019 00:26:48: 117000000 INFO @ Sun, 25 Aug 2019 00:26:56: 118000000 INFO @ Sun, 25 Aug 2019 00:27:04: 119000000 INFO @ Sun, 25 Aug 2019 00:27:13: 120000000 INFO @ Sun, 25 Aug 2019 00:27:21: 121000000 INFO @ Sun, 25 Aug 2019 00:27:29: 122000000 INFO @ Sun, 25 Aug 2019 00:27:31: #1 tag size is determined as 35 bps INFO @ Sun, 25 Aug 2019 00:27:31: #1 tag size = 35 INFO @ Sun, 25 Aug 2019 00:27:31: #1 total tags in treatment: 55292723 INFO @ Sun, 25 Aug 2019 00:27:31: #1 user defined the maximum tags... INFO @ Sun, 25 Aug 2019 00:27:31: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sun, 25 Aug 2019 00:27:33: #1 tags after filtering in treatment: 19826310 INFO @ Sun, 25 Aug 2019 00:27:33: #1 Redundant rate of treatment: 0.64 INFO @ Sun, 25 Aug 2019 00:27:33: #1 finished! INFO @ Sun, 25 Aug 2019 00:27:33: #2 Build Peak Model... INFO @ Sun, 25 Aug 2019 00:27:33: #2 looking for paired plus/minus strand peaks... INFO @ Sun, 25 Aug 2019 00:27:34: #2 number of paired peaks: 0 WARNING @ Sun, 25 Aug 2019 00:27:34: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sun, 25 Aug 2019 00:27:34: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403230/SRX6403230.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling