Job ID = 2641251 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... spots read : 10,850,606 reads read : 21,701,212 reads written : 21,701,212 spots read : 10,824,108 reads read : 21,648,216 reads written : 21,648,216 2019-08-24T13:23:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T13:23:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T13:23:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T13:23:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 11,212,754 reads read : 22,425,508 reads written : 22,425,508 spots read : 11,023,170 reads read : 22,046,340 reads written : 22,046,340 fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:19:03 43910638 reads; of these: 43910638 (100.00%) were paired; of these: 14681370 (33.43%) aligned concordantly 0 times 27759076 (63.22%) aligned concordantly exactly 1 time 1470192 (3.35%) aligned concordantly >1 times ---- 14681370 pairs aligned concordantly 0 times; of these: 109588 (0.75%) aligned discordantly 1 time ---- 14571782 pairs aligned 0 times concordantly or discordantly; of these: 29143564 mates make up the pairs; of these: 23166085 (79.49%) aligned 0 times 5650343 (19.39%) aligned exactly 1 time 327136 (1.12%) aligned >1 times 73.62% overall alignment rate Time searching: 00:19:03 Overall time: 00:19:03 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 3348336 / 29335603 = 0.1141 in library ' ' BAM に変換しました。 Bed ファイルを作成中... INFO @ Sat, 24 Aug 2019 23:09:41: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 23:09:41: #1 read tag files... INFO @ Sat, 24 Aug 2019 23:09:41: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 23:09:48: 1000000 INFO @ Sat, 24 Aug 2019 23:09:54: 2000000 INFO @ Sat, 24 Aug 2019 23:10:00: 3000000 INFO @ Sat, 24 Aug 2019 23:10:06: 4000000 INFO @ Sat, 24 Aug 2019 23:10:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 23:10:11: #1 read tag files... INFO @ Sat, 24 Aug 2019 23:10:11: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 23:10:13: 5000000 INFO @ Sat, 24 Aug 2019 23:10:17: 1000000 INFO @ Sat, 24 Aug 2019 23:10:19: 6000000 INFO @ Sat, 24 Aug 2019 23:10:24: 2000000 INFO @ Sat, 24 Aug 2019 23:10:25: 7000000 INFO @ Sat, 24 Aug 2019 23:10:30: 3000000 INFO @ Sat, 24 Aug 2019 23:10:32: 8000000 INFO @ Sat, 24 Aug 2019 23:10:37: 4000000 INFO @ Sat, 24 Aug 2019 23:10:38: 9000000 BedGraph に変換中... INFO @ Sat, 24 Aug 2019 23:10:41: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 23:10:41: #1 read tag files... INFO @ Sat, 24 Aug 2019 23:10:41: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 23:10:43: 5000000 INFO @ Sat, 24 Aug 2019 23:10:44: 10000000 INFO @ Sat, 24 Aug 2019 23:10:50: 1000000 INFO @ Sat, 24 Aug 2019 23:10:50: 6000000 INFO @ Sat, 24 Aug 2019 23:10:51: 11000000 INFO @ Sat, 24 Aug 2019 23:10:56: 7000000 INFO @ Sat, 24 Aug 2019 23:10:57: 12000000 INFO @ Sat, 24 Aug 2019 23:10:59: 2000000 INFO @ Sat, 24 Aug 2019 23:11:03: 8000000 INFO @ Sat, 24 Aug 2019 23:11:03: 13000000 INFO @ Sat, 24 Aug 2019 23:11:08: 3000000 INFO @ Sat, 24 Aug 2019 23:11:09: 9000000 INFO @ Sat, 24 Aug 2019 23:11:10: 14000000 INFO @ Sat, 24 Aug 2019 23:11:16: 10000000 INFO @ Sat, 24 Aug 2019 23:11:16: 15000000 INFO @ Sat, 24 Aug 2019 23:11:16: 4000000 INFO @ Sat, 24 Aug 2019 23:11:22: 11000000 INFO @ Sat, 24 Aug 2019 23:11:22: 16000000 INFO @ Sat, 24 Aug 2019 23:11:25: 5000000 INFO @ Sat, 24 Aug 2019 23:11:28: 12000000 INFO @ Sat, 24 Aug 2019 23:11:29: 17000000 INFO @ Sat, 24 Aug 2019 23:11:34: 6000000 INFO @ Sat, 24 Aug 2019 23:11:35: 13000000 INFO @ Sat, 24 Aug 2019 23:11:35: 18000000 INFO @ Sat, 24 Aug 2019 23:11:41: 14000000 INFO @ Sat, 24 Aug 2019 23:11:41: 19000000 INFO @ Sat, 24 Aug 2019 23:11:43: 7000000 INFO @ Sat, 24 Aug 2019 23:11:48: 15000000 INFO @ Sat, 24 Aug 2019 23:11:48: 20000000 INFO @ Sat, 24 Aug 2019 23:11:52: 8000000 INFO @ Sat, 24 Aug 2019 23:11:54: 16000000 INFO @ Sat, 24 Aug 2019 23:11:54: 21000000 INFO @ Sat, 24 Aug 2019 23:12:00: 17000000 INFO @ Sat, 24 Aug 2019 23:12:00: 9000000 INFO @ Sat, 24 Aug 2019 23:12:01: 22000000 INFO @ Sat, 24 Aug 2019 23:12:07: 18000000 INFO @ Sat, 24 Aug 2019 23:12:07: 23000000 INFO @ Sat, 24 Aug 2019 23:12:09: 10000000 INFO @ Sat, 24 Aug 2019 23:12:13: 24000000 INFO @ Sat, 24 Aug 2019 23:12:13: 19000000 INFO @ Sat, 24 Aug 2019 23:12:18: 11000000 INFO @ Sat, 24 Aug 2019 23:12:19: 25000000 INFO @ Sat, 24 Aug 2019 23:12:20: 20000000 INFO @ Sat, 24 Aug 2019 23:12:26: 26000000 INFO @ Sat, 24 Aug 2019 23:12:26: 21000000 INFO @ Sat, 24 Aug 2019 23:12:26: 12000000 INFO @ Sat, 24 Aug 2019 23:12:32: 27000000 INFO @ Sat, 24 Aug 2019 23:12:32: 22000000 INFO @ Sat, 24 Aug 2019 23:12:35: 13000000 INFO @ Sat, 24 Aug 2019 23:12:38: 28000000 INFO @ Sat, 24 Aug 2019 23:12:39: 23000000 INFO @ Sat, 24 Aug 2019 23:12:44: 14000000 INFO @ Sat, 24 Aug 2019 23:12:45: 29000000 INFO @ Sat, 24 Aug 2019 23:12:45: 24000000 INFO @ Sat, 24 Aug 2019 23:12:51: 30000000 INFO @ Sat, 24 Aug 2019 23:12:51: 25000000 INFO @ Sat, 24 Aug 2019 23:12:53: 15000000 INFO @ Sat, 24 Aug 2019 23:12:57: 31000000 INFO @ Sat, 24 Aug 2019 23:12:58: 26000000 INFO @ Sat, 24 Aug 2019 23:13:02: 16000000 INFO @ Sat, 24 Aug 2019 23:13:03: 32000000 INFO @ Sat, 24 Aug 2019 23:13:04: 27000000 INFO @ Sat, 24 Aug 2019 23:13:10: 33000000 INFO @ Sat, 24 Aug 2019 23:13:10: 28000000 INFO @ Sat, 24 Aug 2019 23:13:11: 17000000 INFO @ Sat, 24 Aug 2019 23:13:16: 34000000 INFO @ Sat, 24 Aug 2019 23:13:17: 29000000 INFO @ Sat, 24 Aug 2019 23:13:19: 18000000 INFO @ Sat, 24 Aug 2019 23:13:22: 35000000 INFO @ Sat, 24 Aug 2019 23:13:23: 30000000 INFO @ Sat, 24 Aug 2019 23:13:28: 19000000 INFO @ Sat, 24 Aug 2019 23:13:29: 36000000 INFO @ Sat, 24 Aug 2019 23:13:29: 31000000 INFO @ Sat, 24 Aug 2019 23:13:35: 37000000 INFO @ Sat, 24 Aug 2019 23:13:35: 32000000 INFO @ Sat, 24 Aug 2019 23:13:37: 20000000 INFO @ Sat, 24 Aug 2019 23:13:41: 38000000 INFO @ Sat, 24 Aug 2019 23:13:42: 33000000 INFO @ Sat, 24 Aug 2019 23:13:46: 21000000 INFO @ Sat, 24 Aug 2019 23:13:47: 39000000 INFO @ Sat, 24 Aug 2019 23:13:48: 34000000 INFO @ Sat, 24 Aug 2019 23:13:54: 40000000 INFO @ Sat, 24 Aug 2019 23:13:54: 35000000 INFO @ Sat, 24 Aug 2019 23:13:55: 22000000 INFO @ Sat, 24 Aug 2019 23:14:00: 41000000 INFO @ Sat, 24 Aug 2019 23:14:01: 36000000 INFO @ Sat, 24 Aug 2019 23:14:03: 23000000 INFO @ Sat, 24 Aug 2019 23:14:06: 42000000 INFO @ Sat, 24 Aug 2019 23:14:07: 37000000 INFO @ Sat, 24 Aug 2019 23:14:12: 24000000 INFO @ Sat, 24 Aug 2019 23:14:12: 43000000 INFO @ Sat, 24 Aug 2019 23:14:13: 38000000 INFO @ Sat, 24 Aug 2019 23:14:18: 44000000 INFO @ Sat, 24 Aug 2019 23:14:20: 39000000 INFO @ Sat, 24 Aug 2019 23:14:21: 25000000 INFO @ Sat, 24 Aug 2019 23:14:24: 45000000 INFO @ Sat, 24 Aug 2019 23:14:26: 40000000 INFO @ Sat, 24 Aug 2019 23:14:29: 26000000 INFO @ Sat, 24 Aug 2019 23:14:30: 46000000 INFO @ Sat, 24 Aug 2019 23:14:32: 41000000 INFO @ Sat, 24 Aug 2019 23:14:37: 47000000 INFO @ Sat, 24 Aug 2019 23:14:38: 27000000 INFO @ Sat, 24 Aug 2019 23:14:38: 42000000 INFO @ Sat, 24 Aug 2019 23:14:43: 48000000 INFO @ Sat, 24 Aug 2019 23:14:44: 43000000 INFO @ Sat, 24 Aug 2019 23:14:47: 28000000 INFO @ Sat, 24 Aug 2019 23:14:49: 49000000 INFO @ Sat, 24 Aug 2019 23:14:51: 44000000 INFO @ Sat, 24 Aug 2019 23:14:55: 50000000 INFO @ Sat, 24 Aug 2019 23:14:55: 29000000 INFO @ Sat, 24 Aug 2019 23:14:57: 45000000 INFO @ Sat, 24 Aug 2019 23:15:01: 51000000 INFO @ Sat, 24 Aug 2019 23:15:03: 46000000 INFO @ Sat, 24 Aug 2019 23:15:04: 30000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 24 Aug 2019 23:15:07: 52000000 INFO @ Sat, 24 Aug 2019 23:15:09: 47000000 INFO @ Sat, 24 Aug 2019 23:15:13: 31000000 INFO @ Sat, 24 Aug 2019 23:15:13: 53000000 INFO @ Sat, 24 Aug 2019 23:15:15: 48000000 INFO @ Sat, 24 Aug 2019 23:15:20: 54000000 INFO @ Sat, 24 Aug 2019 23:15:21: 32000000 INFO @ Sat, 24 Aug 2019 23:15:21: 49000000 INFO @ Sat, 24 Aug 2019 23:15:26: 55000000 BigWig に変換しました。 INFO @ Sat, 24 Aug 2019 23:15:28: 50000000 INFO @ Sat, 24 Aug 2019 23:15:30: 33000000 INFO @ Sat, 24 Aug 2019 23:15:32: 56000000 INFO @ Sat, 24 Aug 2019 23:15:34: 51000000 INFO @ Sat, 24 Aug 2019 23:15:38: 57000000 INFO @ Sat, 24 Aug 2019 23:15:38: 34000000 INFO @ Sat, 24 Aug 2019 23:15:40: 52000000 INFO @ Sat, 24 Aug 2019 23:15:44: #1 tag size is determined as 35 bps INFO @ Sat, 24 Aug 2019 23:15:44: #1 tag size = 35 INFO @ Sat, 24 Aug 2019 23:15:44: #1 total tags in treatment: 25884887 INFO @ Sat, 24 Aug 2019 23:15:44: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 23:15:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 23:15:45: #1 tags after filtering in treatment: 10708297 INFO @ Sat, 24 Aug 2019 23:15:45: #1 Redundant rate of treatment: 0.59 INFO @ Sat, 24 Aug 2019 23:15:45: #1 finished! INFO @ Sat, 24 Aug 2019 23:15:45: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 23:15:45: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 23:15:46: #2 number of paired peaks: 0 WARNING @ Sat, 24 Aug 2019 23:15:46: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sat, 24 Aug 2019 23:15:46: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis INFO @ Sat, 24 Aug 2019 23:15:46: 53000000 needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sat, 24 Aug 2019 23:15:47: 35000000 INFO @ Sat, 24 Aug 2019 23:15:52: 54000000 INFO @ Sat, 24 Aug 2019 23:15:56: 36000000 INFO @ Sat, 24 Aug 2019 23:15:58: 55000000 INFO @ Sat, 24 Aug 2019 23:16:04: 37000000 INFO @ Sat, 24 Aug 2019 23:16:04: 56000000 INFO @ Sat, 24 Aug 2019 23:16:11: 57000000 INFO @ Sat, 24 Aug 2019 23:16:13: 38000000 INFO @ Sat, 24 Aug 2019 23:16:17: #1 tag size is determined as 35 bps INFO @ Sat, 24 Aug 2019 23:16:17: #1 tag size = 35 INFO @ Sat, 24 Aug 2019 23:16:17: #1 total tags in treatment: 25884887 INFO @ Sat, 24 Aug 2019 23:16:17: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 23:16:17: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 23:16:18: #1 tags after filtering in treatment: 10708297 INFO @ Sat, 24 Aug 2019 23:16:18: #1 Redundant rate of treatment: 0.59 INFO @ Sat, 24 Aug 2019 23:16:18: #1 finished! INFO @ Sat, 24 Aug 2019 23:16:18: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 23:16:18: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 23:16:18: #2 number of paired peaks: 0 WARNING @ Sat, 24 Aug 2019 23:16:18: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sat, 24 Aug 2019 23:16:18: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Sat, 24 Aug 2019 23:16:22: 39000000 INFO @ Sat, 24 Aug 2019 23:16:30: 40000000 INFO @ Sat, 24 Aug 2019 23:16:38: 41000000 INFO @ Sat, 24 Aug 2019 23:16:46: 42000000 INFO @ Sat, 24 Aug 2019 23:16:54: 43000000 INFO @ Sat, 24 Aug 2019 23:17:02: 44000000 INFO @ Sat, 24 Aug 2019 23:17:09: 45000000 INFO @ Sat, 24 Aug 2019 23:17:17: 46000000 INFO @ Sat, 24 Aug 2019 23:17:24: 47000000 INFO @ Sat, 24 Aug 2019 23:17:32: 48000000 INFO @ Sat, 24 Aug 2019 23:17:40: 49000000 INFO @ Sat, 24 Aug 2019 23:17:47: 50000000 INFO @ Sat, 24 Aug 2019 23:17:55: 51000000 INFO @ Sat, 24 Aug 2019 23:18:02: 52000000 INFO @ Sat, 24 Aug 2019 23:18:10: 53000000 INFO @ Sat, 24 Aug 2019 23:18:17: 54000000 INFO @ Sat, 24 Aug 2019 23:18:25: 55000000 INFO @ Sat, 24 Aug 2019 23:18:33: 56000000 INFO @ Sat, 24 Aug 2019 23:18:40: 57000000 INFO @ Sat, 24 Aug 2019 23:18:48: #1 tag size is determined as 35 bps INFO @ Sat, 24 Aug 2019 23:18:48: #1 tag size = 35 INFO @ Sat, 24 Aug 2019 23:18:48: #1 total tags in treatment: 25884887 INFO @ Sat, 24 Aug 2019 23:18:48: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 23:18:48: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 23:18:49: #1 tags after filtering in treatment: 10708297 INFO @ Sat, 24 Aug 2019 23:18:49: #1 Redundant rate of treatment: 0.59 INFO @ Sat, 24 Aug 2019 23:18:49: #1 finished! INFO @ Sat, 24 Aug 2019 23:18:49: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 23:18:49: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 23:18:49: #2 number of paired peaks: 0 WARNING @ Sat, 24 Aug 2019 23:18:49: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Sat, 24 Aug 2019 23:18:49: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX6403227/SRX6403227.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling