Job ID = 11244894 sra ファイルのダウンロード中... Completed: 1181309K bytes transferred in 13 seconds (705241K bits/sec), in 1 file. Completed: 1154342K bytes transferred in 15 seconds (626171K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 25847559 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065340/SRR7145400.sra Written 25847559 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065340/SRR7145400.sra Read 26155303 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065340/SRR7145399.sra Written 26155303 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065340/SRR7145399.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:37:12 52002862 reads; of these: 52002862 (100.00%) were paired; of these: 2860873 (5.50%) aligned concordantly 0 times 43223313 (83.12%) aligned concordantly exactly 1 time 5918676 (11.38%) aligned concordantly >1 times ---- 2860873 pairs aligned concordantly 0 times; of these: 584070 (20.42%) aligned discordantly 1 time ---- 2276803 pairs aligned 0 times concordantly or discordantly; of these: 4553606 mates make up the pairs; of these: 4070969 (89.40%) aligned 0 times 241821 (5.31%) aligned exactly 1 time 240816 (5.29%) aligned >1 times 96.09% overall alignment rate Time searching: 00:37:12 Overall time: 00:37:12 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 44 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 2550535 / 49358687 = 0.0517 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Tue, 09 Oct 2018 23:43:31: # Command line: callpeak -t SRX4065340.bam -f BAM -g 12100000 -n SRX4065340.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4065340.20 # format = BAM # ChIP-seq file = ['SRX4065340.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 09 Oct 2018 23:43:31: #1 read tag files... INFO @ Tue, 09 Oct 2018 23:43:31: #1 read treatment tags... INFO @ Tue, 09 Oct 2018 23:43:31: # Command line: callpeak -t SRX4065340.bam -f BAM -g 12100000 -n SRX4065340.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4065340.05 # format = BAM # ChIP-seq file = ['SRX4065340.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 09 Oct 2018 23:43:31: #1 read tag files... INFO @ Tue, 09 Oct 2018 23:43:31: #1 read treatment tags... INFO @ Tue, 09 Oct 2018 23:43:31: # Command line: callpeak -t SRX4065340.bam -f BAM -g 12100000 -n SRX4065340.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4065340.10 # format = BAM # ChIP-seq file = ['SRX4065340.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 09 Oct 2018 23:43:31: #1 read tag files... INFO @ Tue, 09 Oct 2018 23:43:31: #1 read treatment tags... INFO @ Tue, 09 Oct 2018 23:43:37: 1000000 INFO @ Tue, 09 Oct 2018 23:43:37: 1000000 INFO @ Tue, 09 Oct 2018 23:43:37: 1000000 INFO @ Tue, 09 Oct 2018 23:43:43: 2000000 INFO @ Tue, 09 Oct 2018 23:43:43: 2000000 INFO @ Tue, 09 Oct 2018 23:43:43: 2000000 INFO @ Tue, 09 Oct 2018 23:43:49: 3000000 INFO @ Tue, 09 Oct 2018 23:43:50: 3000000 INFO @ Tue, 09 Oct 2018 23:43:50: 3000000 INFO @ Tue, 09 Oct 2018 23:43:55: 4000000 INFO @ Tue, 09 Oct 2018 23:43:56: 4000000 INFO @ Tue, 09 Oct 2018 23:43:56: 4000000 INFO @ Tue, 09 Oct 2018 23:44:01: 5000000 INFO @ Tue, 09 Oct 2018 23:44:02: 5000000 INFO @ Tue, 09 Oct 2018 23:44:02: 5000000 INFO @ Tue, 09 Oct 2018 23:44:07: 6000000 INFO @ Tue, 09 Oct 2018 23:44:08: 6000000 INFO @ Tue, 09 Oct 2018 23:44:08: 6000000 INFO @ Tue, 09 Oct 2018 23:44:13: 7000000 INFO @ Tue, 09 Oct 2018 23:44:15: 7000000 INFO @ Tue, 09 Oct 2018 23:44:15: 7000000 INFO @ Tue, 09 Oct 2018 23:44:20: 8000000 INFO @ Tue, 09 Oct 2018 23:44:21: 8000000 INFO @ Tue, 09 Oct 2018 23:44:21: 8000000 INFO @ Tue, 09 Oct 2018 23:44:25: 9000000 INFO @ Tue, 09 Oct 2018 23:44:27: 9000000 INFO @ Tue, 09 Oct 2018 23:44:27: 9000000 INFO @ Tue, 09 Oct 2018 23:44:31: 10000000 INFO @ Tue, 09 Oct 2018 23:44:33: 10000000 INFO @ Tue, 09 Oct 2018 23:44:33: 10000000 INFO @ Tue, 09 Oct 2018 23:44:37: 11000000 INFO @ Tue, 09 Oct 2018 23:44:40: 11000000 INFO @ Tue, 09 Oct 2018 23:44:40: 11000000 INFO @ Tue, 09 Oct 2018 23:44:43: 12000000 INFO @ Tue, 09 Oct 2018 23:44:46: 12000000 INFO @ Tue, 09 Oct 2018 23:44:46: 12000000 INFO @ Tue, 09 Oct 2018 23:44:49: 13000000 INFO @ Tue, 09 Oct 2018 23:44:52: 13000000 INFO @ Tue, 09 Oct 2018 23:44:52: 13000000 INFO @ Tue, 09 Oct 2018 23:44:55: 14000000 INFO @ Tue, 09 Oct 2018 23:44:58: 14000000 INFO @ Tue, 09 Oct 2018 23:44:58: 14000000 INFO @ Tue, 09 Oct 2018 23:45:00: 15000000 INFO @ Tue, 09 Oct 2018 23:45:04: 15000000 INFO @ Tue, 09 Oct 2018 23:45:04: 15000000 INFO @ Tue, 09 Oct 2018 23:45:06: 16000000 INFO @ Tue, 09 Oct 2018 23:45:10: 16000000 INFO @ Tue, 09 Oct 2018 23:45:10: 16000000 INFO @ Tue, 09 Oct 2018 23:45:12: 17000000 INFO @ Tue, 09 Oct 2018 23:45:16: 17000000 INFO @ Tue, 09 Oct 2018 23:45:16: 17000000 INFO @ Tue, 09 Oct 2018 23:45:18: 18000000 INFO @ Tue, 09 Oct 2018 23:45:23: 18000000 INFO @ Tue, 09 Oct 2018 23:45:23: 18000000 INFO @ Tue, 09 Oct 2018 23:45:23: 19000000 INFO @ Tue, 09 Oct 2018 23:45:29: 19000000 INFO @ Tue, 09 Oct 2018 23:45:29: 19000000 INFO @ Tue, 09 Oct 2018 23:45:29: 20000000 INFO @ Tue, 09 Oct 2018 23:45:35: 20000000 INFO @ Tue, 09 Oct 2018 23:45:35: 20000000 INFO @ Tue, 09 Oct 2018 23:45:35: 21000000 INFO @ Tue, 09 Oct 2018 23:45:41: 22000000 INFO @ Tue, 09 Oct 2018 23:45:41: 21000000 INFO @ Tue, 09 Oct 2018 23:45:41: 21000000 INFO @ Tue, 09 Oct 2018 23:45:46: 23000000 INFO @ Tue, 09 Oct 2018 23:45:47: 22000000 INFO @ Tue, 09 Oct 2018 23:45:47: 22000000 INFO @ Tue, 09 Oct 2018 23:45:52: 24000000 INFO @ Tue, 09 Oct 2018 23:45:53: 23000000 INFO @ Tue, 09 Oct 2018 23:45:53: 23000000 INFO @ Tue, 09 Oct 2018 23:45:58: 25000000 INFO @ Tue, 09 Oct 2018 23:45:59: 24000000 INFO @ Tue, 09 Oct 2018 23:45:59: 24000000 INFO @ Tue, 09 Oct 2018 23:46:04: 26000000 INFO @ Tue, 09 Oct 2018 23:46:05: 25000000 INFO @ Tue, 09 Oct 2018 23:46:05: 25000000 INFO @ Tue, 09 Oct 2018 23:46:10: 27000000 INFO @ Tue, 09 Oct 2018 23:46:12: 26000000 INFO @ Tue, 09 Oct 2018 23:46:12: 26000000 INFO @ Tue, 09 Oct 2018 23:46:16: 28000000 INFO @ Tue, 09 Oct 2018 23:46:18: 27000000 INFO @ Tue, 09 Oct 2018 23:46:18: 27000000 INFO @ Tue, 09 Oct 2018 23:46:21: 29000000 INFO @ Tue, 09 Oct 2018 23:46:24: 28000000 INFO @ Tue, 09 Oct 2018 23:46:24: 28000000 INFO @ Tue, 09 Oct 2018 23:46:27: 30000000 INFO @ Tue, 09 Oct 2018 23:46:30: 29000000 INFO @ Tue, 09 Oct 2018 23:46:30: 29000000 INFO @ Tue, 09 Oct 2018 23:46:33: 31000000 INFO @ Tue, 09 Oct 2018 23:46:36: 30000000 INFO @ Tue, 09 Oct 2018 23:46:36: 30000000 INFO @ Tue, 09 Oct 2018 23:46:39: 32000000 INFO @ Tue, 09 Oct 2018 23:46:42: 31000000 INFO @ Tue, 09 Oct 2018 23:46:43: 31000000 INFO @ Tue, 09 Oct 2018 23:46:46: 33000000 INFO @ Tue, 09 Oct 2018 23:46:48: 32000000 INFO @ Tue, 09 Oct 2018 23:46:49: 32000000 INFO @ Tue, 09 Oct 2018 23:46:51: 34000000 INFO @ Tue, 09 Oct 2018 23:46:54: 33000000 INFO @ Tue, 09 Oct 2018 23:46:56: 33000000 INFO @ Tue, 09 Oct 2018 23:46:57: 35000000 INFO @ Tue, 09 Oct 2018 23:47:00: 34000000 INFO @ Tue, 09 Oct 2018 23:47:02: 34000000 INFO @ Tue, 09 Oct 2018 23:47:03: 36000000 INFO @ Tue, 09 Oct 2018 23:47:07: 35000000 INFO @ Tue, 09 Oct 2018 23:47:08: 35000000 INFO @ Tue, 09 Oct 2018 23:47:09: 37000000 INFO @ Tue, 09 Oct 2018 23:47:13: 36000000 INFO @ Tue, 09 Oct 2018 23:47:14: 36000000 INFO @ Tue, 09 Oct 2018 23:47:15: 38000000 INFO @ Tue, 09 Oct 2018 23:47:19: 37000000 INFO @ Tue, 09 Oct 2018 23:47:21: 39000000 INFO @ Tue, 09 Oct 2018 23:47:21: 37000000 INFO @ Tue, 09 Oct 2018 23:47:26: 38000000 INFO @ Tue, 09 Oct 2018 23:47:26: 40000000 INFO @ Tue, 09 Oct 2018 23:47:27: 38000000 INFO @ Tue, 09 Oct 2018 23:47:32: 41000000 INFO @ Tue, 09 Oct 2018 23:47:32: 39000000 INFO @ Tue, 09 Oct 2018 23:47:34: 39000000 INFO @ Tue, 09 Oct 2018 23:47:38: 42000000 INFO @ Tue, 09 Oct 2018 23:47:39: 40000000 INFO @ Tue, 09 Oct 2018 23:47:40: 40000000 INFO @ Tue, 09 Oct 2018 23:47:44: 43000000 INFO @ Tue, 09 Oct 2018 23:47:45: 41000000 INFO @ Tue, 09 Oct 2018 23:47:46: 41000000 INFO @ Tue, 09 Oct 2018 23:47:49: 44000000 INFO @ Tue, 09 Oct 2018 23:47:51: 42000000 INFO @ Tue, 09 Oct 2018 23:47:53: 42000000 INFO @ Tue, 09 Oct 2018 23:47:55: 45000000 INFO @ Tue, 09 Oct 2018 23:47:57: 43000000 INFO @ Tue, 09 Oct 2018 23:47:59: 43000000 INFO @ Tue, 09 Oct 2018 23:48:01: 46000000 INFO @ Tue, 09 Oct 2018 23:48:03: 44000000 INFO @ Tue, 09 Oct 2018 23:48:05: 44000000 INFO @ Tue, 09 Oct 2018 23:48:07: 47000000 INFO @ Tue, 09 Oct 2018 23:48:10: 45000000 INFO @ Tue, 09 Oct 2018 23:48:11: 45000000 INFO @ Tue, 09 Oct 2018 23:48:13: 48000000 INFO @ Tue, 09 Oct 2018 23:48:16: 46000000 INFO @ Tue, 09 Oct 2018 23:48:17: 46000000 INFO @ Tue, 09 Oct 2018 23:48:18: 49000000 INFO @ Tue, 09 Oct 2018 23:48:22: 47000000 INFO @ Tue, 09 Oct 2018 23:48:23: 47000000 INFO @ Tue, 09 Oct 2018 23:48:24: 50000000 INFO @ Tue, 09 Oct 2018 23:48:28: 48000000 INFO @ Tue, 09 Oct 2018 23:48:30: 48000000 INFO @ Tue, 09 Oct 2018 23:48:30: 51000000 INFO @ Tue, 09 Oct 2018 23:48:35: 49000000 INFO @ Tue, 09 Oct 2018 23:48:36: 52000000 INFO @ Tue, 09 Oct 2018 23:48:36: 49000000 INFO @ Tue, 09 Oct 2018 23:48:41: 50000000 INFO @ Tue, 09 Oct 2018 23:48:42: 53000000 INFO @ Tue, 09 Oct 2018 23:48:43: 50000000 INFO @ Tue, 09 Oct 2018 23:48:47: 54000000 INFO @ Tue, 09 Oct 2018 23:48:48: 51000000 INFO @ Tue, 09 Oct 2018 23:48:49: 51000000 INFO @ Tue, 09 Oct 2018 23:48:53: 55000000 INFO @ Tue, 09 Oct 2018 23:48:54: 52000000 INFO @ Tue, 09 Oct 2018 23:48:55: 52000000 INFO @ Tue, 09 Oct 2018 23:48:59: 56000000 INFO @ Tue, 09 Oct 2018 23:49:00: 53000000 INFO @ Tue, 09 Oct 2018 23:49:02: 53000000 INFO @ Tue, 09 Oct 2018 23:49:05: 57000000 INFO @ Tue, 09 Oct 2018 23:49:07: 54000000 INFO @ Tue, 09 Oct 2018 23:49:08: 54000000 INFO @ Tue, 09 Oct 2018 23:49:11: 58000000 INFO @ Tue, 09 Oct 2018 23:49:13: 55000000 INFO @ Tue, 09 Oct 2018 23:49:15: 55000000 INFO @ Tue, 09 Oct 2018 23:49:16: 59000000 INFO @ Tue, 09 Oct 2018 23:49:20: 56000000 INFO @ Tue, 09 Oct 2018 23:49:21: 56000000 INFO @ Tue, 09 Oct 2018 23:49:22: 60000000 INFO @ Tue, 09 Oct 2018 23:49:26: 57000000 INFO @ Tue, 09 Oct 2018 23:49:28: 57000000 INFO @ Tue, 09 Oct 2018 23:49:28: 61000000 INFO @ Tue, 09 Oct 2018 23:49:33: 58000000 INFO @ Tue, 09 Oct 2018 23:49:34: 62000000 INFO @ Tue, 09 Oct 2018 23:49:34: 58000000 INFO @ Tue, 09 Oct 2018 23:49:39: 59000000 INFO @ Tue, 09 Oct 2018 23:49:40: 63000000 INFO @ Tue, 09 Oct 2018 23:49:40: 59000000 INFO @ Tue, 09 Oct 2018 23:49:45: 64000000 INFO @ Tue, 09 Oct 2018 23:49:45: 60000000 INFO @ Tue, 09 Oct 2018 23:49:47: 60000000 INFO @ Tue, 09 Oct 2018 23:49:51: 65000000 INFO @ Tue, 09 Oct 2018 23:49:52: 61000000 INFO @ Tue, 09 Oct 2018 23:49:53: 61000000 INFO @ Tue, 09 Oct 2018 23:49:57: 66000000 INFO @ Tue, 09 Oct 2018 23:49:58: 62000000 INFO @ Tue, 09 Oct 2018 23:49:59: 62000000 INFO @ Tue, 09 Oct 2018 23:50:03: 67000000 INFO @ Tue, 09 Oct 2018 23:50:04: 63000000 INFO @ Tue, 09 Oct 2018 23:50:05: 63000000 INFO @ Tue, 09 Oct 2018 23:50:09: 68000000 INFO @ Tue, 09 Oct 2018 23:50:10: 64000000 INFO @ Tue, 09 Oct 2018 23:50:11: 64000000 INFO @ Tue, 09 Oct 2018 23:50:15: 69000000 INFO @ Tue, 09 Oct 2018 23:50:17: 65000000 INFO @ Tue, 09 Oct 2018 23:50:17: 65000000 INFO @ Tue, 09 Oct 2018 23:50:21: 70000000 INFO @ Tue, 09 Oct 2018 23:50:23: 66000000 INFO @ Tue, 09 Oct 2018 23:50:23: 66000000 INFO @ Tue, 09 Oct 2018 23:50:27: 71000000 INFO @ Tue, 09 Oct 2018 23:50:29: 67000000 INFO @ Tue, 09 Oct 2018 23:50:30: 67000000 INFO @ Tue, 09 Oct 2018 23:50:34: 72000000 INFO @ Tue, 09 Oct 2018 23:50:35: 68000000 INFO @ Tue, 09 Oct 2018 23:50:36: 68000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 09 Oct 2018 23:50:40: 73000000 INFO @ Tue, 09 Oct 2018 23:50:41: 69000000 INFO @ Tue, 09 Oct 2018 23:50:43: 69000000 INFO @ Tue, 09 Oct 2018 23:50:46: 74000000 INFO @ Tue, 09 Oct 2018 23:50:47: 70000000 INFO @ Tue, 09 Oct 2018 23:50:49: 70000000 INFO @ Tue, 09 Oct 2018 23:50:52: 75000000 INFO @ Tue, 09 Oct 2018 23:50:53: 71000000 INFO @ Tue, 09 Oct 2018 23:50:55: 71000000 INFO @ Tue, 09 Oct 2018 23:50:58: 72000000 INFO @ Tue, 09 Oct 2018 23:50:58: 76000000 INFO @ Tue, 09 Oct 2018 23:51:02: 72000000 BigWig に変換しました。 INFO @ Tue, 09 Oct 2018 23:51:04: 73000000 INFO @ Tue, 09 Oct 2018 23:51:05: 77000000 INFO @ Tue, 09 Oct 2018 23:51:09: 73000000 INFO @ Tue, 09 Oct 2018 23:51:10: 74000000 INFO @ Tue, 09 Oct 2018 23:51:11: 78000000 INFO @ Tue, 09 Oct 2018 23:51:15: 74000000 INFO @ Tue, 09 Oct 2018 23:51:16: 75000000 INFO @ Tue, 09 Oct 2018 23:51:17: 79000000 INFO @ Tue, 09 Oct 2018 23:51:22: 75000000 INFO @ Tue, 09 Oct 2018 23:51:22: 76000000 INFO @ Tue, 09 Oct 2018 23:51:23: 80000000 INFO @ Tue, 09 Oct 2018 23:51:28: 77000000 INFO @ Tue, 09 Oct 2018 23:51:28: 76000000 INFO @ Tue, 09 Oct 2018 23:51:29: 81000000 INFO @ Tue, 09 Oct 2018 23:51:34: 78000000 INFO @ Tue, 09 Oct 2018 23:51:34: 77000000 INFO @ Tue, 09 Oct 2018 23:51:35: 82000000 INFO @ Tue, 09 Oct 2018 23:51:40: 79000000 INFO @ Tue, 09 Oct 2018 23:51:41: 78000000 INFO @ Tue, 09 Oct 2018 23:51:42: 83000000 INFO @ Tue, 09 Oct 2018 23:51:46: 80000000 INFO @ Tue, 09 Oct 2018 23:51:47: 79000000 INFO @ Tue, 09 Oct 2018 23:51:47: 84000000 INFO @ Tue, 09 Oct 2018 23:51:53: 81000000 INFO @ Tue, 09 Oct 2018 23:51:53: 85000000 INFO @ Tue, 09 Oct 2018 23:51:54: 80000000 INFO @ Tue, 09 Oct 2018 23:51:59: 86000000 INFO @ Tue, 09 Oct 2018 23:51:59: 82000000 INFO @ Tue, 09 Oct 2018 23:52:00: 81000000 INFO @ Tue, 09 Oct 2018 23:52:05: 87000000 INFO @ Tue, 09 Oct 2018 23:52:05: 83000000 INFO @ Tue, 09 Oct 2018 23:52:07: 82000000 INFO @ Tue, 09 Oct 2018 23:52:11: 88000000 INFO @ Tue, 09 Oct 2018 23:52:12: 84000000 INFO @ Tue, 09 Oct 2018 23:52:13: 83000000 INFO @ Tue, 09 Oct 2018 23:52:16: 89000000 INFO @ Tue, 09 Oct 2018 23:52:18: 85000000 INFO @ Tue, 09 Oct 2018 23:52:19: 84000000 INFO @ Tue, 09 Oct 2018 23:52:22: 90000000 INFO @ Tue, 09 Oct 2018 23:52:24: 86000000 INFO @ Tue, 09 Oct 2018 23:52:26: 85000000 INFO @ Tue, 09 Oct 2018 23:52:28: 91000000 INFO @ Tue, 09 Oct 2018 23:52:31: 87000000 INFO @ Tue, 09 Oct 2018 23:52:32: 86000000 INFO @ Tue, 09 Oct 2018 23:52:34: 92000000 INFO @ Tue, 09 Oct 2018 23:52:37: 88000000 INFO @ Tue, 09 Oct 2018 23:52:38: 87000000 INFO @ Tue, 09 Oct 2018 23:52:40: 93000000 INFO @ Tue, 09 Oct 2018 23:52:44: 89000000 INFO @ Tue, 09 Oct 2018 23:52:45: 88000000 INFO @ Tue, 09 Oct 2018 23:52:46: 94000000 INFO @ Tue, 09 Oct 2018 23:52:50: 90000000 INFO @ Tue, 09 Oct 2018 23:52:51: #1 tag size is determined as 50 bps INFO @ Tue, 09 Oct 2018 23:52:51: #1 tag size = 50 INFO @ Tue, 09 Oct 2018 23:52:51: #1 total tags in treatment: 46594586 INFO @ Tue, 09 Oct 2018 23:52:51: #1 user defined the maximum tags... INFO @ Tue, 09 Oct 2018 23:52:51: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 09 Oct 2018 23:52:51: 89000000 INFO @ Tue, 09 Oct 2018 23:52:52: #1 tags after filtering in treatment: 18879043 INFO @ Tue, 09 Oct 2018 23:52:52: #1 Redundant rate of treatment: 0.59 INFO @ Tue, 09 Oct 2018 23:52:52: #1 finished! INFO @ Tue, 09 Oct 2018 23:52:52: #2 Build Peak Model... INFO @ Tue, 09 Oct 2018 23:52:52: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 09 Oct 2018 23:52:53: #2 number of paired peaks: 0 WARNING @ Tue, 09 Oct 2018 23:52:53: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 09 Oct 2018 23:52:53: Process for pairing-model is terminated! cat: SRX4065340.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4065340.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065340.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065340.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Tue, 09 Oct 2018 23:52:57: 91000000 INFO @ Tue, 09 Oct 2018 23:52:58: 90000000 INFO @ Tue, 09 Oct 2018 23:53:03: 92000000 INFO @ Tue, 09 Oct 2018 23:53:04: 91000000 INFO @ Tue, 09 Oct 2018 23:53:10: 93000000 INFO @ Tue, 09 Oct 2018 23:53:10: 92000000 INFO @ Tue, 09 Oct 2018 23:53:16: 94000000 INFO @ Tue, 09 Oct 2018 23:53:17: 93000000 INFO @ Tue, 09 Oct 2018 23:53:22: #1 tag size is determined as 50 bps INFO @ Tue, 09 Oct 2018 23:53:22: #1 tag size = 50 INFO @ Tue, 09 Oct 2018 23:53:22: #1 total tags in treatment: 46594586 INFO @ Tue, 09 Oct 2018 23:53:22: #1 user defined the maximum tags... INFO @ Tue, 09 Oct 2018 23:53:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 09 Oct 2018 23:53:23: #1 tags after filtering in treatment: 18879043 INFO @ Tue, 09 Oct 2018 23:53:23: #1 Redundant rate of treatment: 0.59 INFO @ Tue, 09 Oct 2018 23:53:23: #1 finished! INFO @ Tue, 09 Oct 2018 23:53:23: #2 Build Peak Model... INFO @ Tue, 09 Oct 2018 23:53:23: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 09 Oct 2018 23:53:23: 94000000 INFO @ Tue, 09 Oct 2018 23:53:24: #2 number of paired peaks: 0 WARNING @ Tue, 09 Oct 2018 23:53:24: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 09 Oct 2018 23:53:24: Process for pairing-model is terminated! cat: SRX4065340.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4065340.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065340.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065340.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Tue, 09 Oct 2018 23:53:28: #1 tag size is determined as 50 bps INFO @ Tue, 09 Oct 2018 23:53:28: #1 tag size = 50 INFO @ Tue, 09 Oct 2018 23:53:28: #1 total tags in treatment: 46594586 INFO @ Tue, 09 Oct 2018 23:53:28: #1 user defined the maximum tags... INFO @ Tue, 09 Oct 2018 23:53:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 09 Oct 2018 23:53:29: #1 tags after filtering in treatment: 18879043 INFO @ Tue, 09 Oct 2018 23:53:29: #1 Redundant rate of treatment: 0.59 INFO @ Tue, 09 Oct 2018 23:53:29: #1 finished! INFO @ Tue, 09 Oct 2018 23:53:29: #2 Build Peak Model... INFO @ Tue, 09 Oct 2018 23:53:29: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 09 Oct 2018 23:53:30: #2 number of paired peaks: 0 WARNING @ Tue, 09 Oct 2018 23:53:30: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Tue, 09 Oct 2018 23:53:30: Process for pairing-model is terminated! cat: SRX4065340.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4065340.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065340.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065340.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling