Job ID = 11244890 sra ファイルのダウンロード中... Completed: 1378050K bytes transferred in 19 seconds (573921K bits/sec), in 1 file. Completed: 1314085K bytes transferred in 16 seconds (633277K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Read 26887784 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065336/SRR7145392.sra Written 26887784 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065336/SRR7145392.sra Read 28287623 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065336/SRR7145391.sra Written 28287623 spots for /home/okishinya/chipatlas/results/sacCer3/SRX4065336/SRR7145391.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:47:50 55175407 reads; of these: 55175407 (100.00%) were paired; of these: 2478737 (4.49%) aligned concordantly 0 times 46276341 (83.87%) aligned concordantly exactly 1 time 6420329 (11.64%) aligned concordantly >1 times ---- 2478737 pairs aligned concordantly 0 times; of these: 702550 (28.34%) aligned discordantly 1 time ---- 1776187 pairs aligned 0 times concordantly or discordantly; of these: 3552374 mates make up the pairs; of these: 2815673 (79.26%) aligned 0 times 411128 (11.57%) aligned exactly 1 time 325573 (9.16%) aligned >1 times 97.45% overall alignment rate Time searching: 00:47:50 Overall time: 00:47:50 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 44 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 2499087 / 53098254 = 0.0471 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Tue, 09 Oct 2018 23:56:41: # Command line: callpeak -t SRX4065336.bam -f BAM -g 12100000 -n SRX4065336.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4065336.10 # format = BAM # ChIP-seq file = ['SRX4065336.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 09 Oct 2018 23:56:41: #1 read tag files... INFO @ Tue, 09 Oct 2018 23:56:41: #1 read treatment tags... INFO @ Tue, 09 Oct 2018 23:56:41: # Command line: callpeak -t SRX4065336.bam -f BAM -g 12100000 -n SRX4065336.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4065336.05 # format = BAM # ChIP-seq file = ['SRX4065336.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 09 Oct 2018 23:56:41: #1 read tag files... INFO @ Tue, 09 Oct 2018 23:56:41: #1 read treatment tags... INFO @ Tue, 09 Oct 2018 23:56:41: # Command line: callpeak -t SRX4065336.bam -f BAM -g 12100000 -n SRX4065336.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4065336.20 # format = BAM # ChIP-seq file = ['SRX4065336.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 09 Oct 2018 23:56:41: #1 read tag files... INFO @ Tue, 09 Oct 2018 23:56:41: #1 read treatment tags... INFO @ Tue, 09 Oct 2018 23:56:47: 1000000 INFO @ Tue, 09 Oct 2018 23:56:48: 1000000 INFO @ Tue, 09 Oct 2018 23:56:48: 1000000 INFO @ Tue, 09 Oct 2018 23:56:53: 2000000 INFO @ Tue, 09 Oct 2018 23:56:53: 2000000 INFO @ Tue, 09 Oct 2018 23:56:53: 2000000 INFO @ Tue, 09 Oct 2018 23:56:59: 3000000 INFO @ Tue, 09 Oct 2018 23:56:59: 3000000 INFO @ Tue, 09 Oct 2018 23:56:59: 3000000 INFO @ Tue, 09 Oct 2018 23:57:05: 4000000 INFO @ Tue, 09 Oct 2018 23:57:05: 4000000 INFO @ Tue, 09 Oct 2018 23:57:05: 4000000 INFO @ Tue, 09 Oct 2018 23:57:12: 5000000 INFO @ Tue, 09 Oct 2018 23:57:12: 5000000 INFO @ Tue, 09 Oct 2018 23:57:12: 5000000 INFO @ Tue, 09 Oct 2018 23:57:18: 6000000 INFO @ Tue, 09 Oct 2018 23:57:18: 6000000 INFO @ Tue, 09 Oct 2018 23:57:18: 6000000 INFO @ Tue, 09 Oct 2018 23:57:23: 7000000 INFO @ Tue, 09 Oct 2018 23:57:24: 7000000 INFO @ Tue, 09 Oct 2018 23:57:25: 7000000 INFO @ Tue, 09 Oct 2018 23:57:29: 8000000 INFO @ Tue, 09 Oct 2018 23:57:30: 8000000 INFO @ Tue, 09 Oct 2018 23:57:31: 8000000 INFO @ Tue, 09 Oct 2018 23:57:36: 9000000 INFO @ Tue, 09 Oct 2018 23:57:37: 9000000 INFO @ Tue, 09 Oct 2018 23:57:38: 9000000 INFO @ Tue, 09 Oct 2018 23:57:42: 10000000 INFO @ Tue, 09 Oct 2018 23:57:43: 10000000 INFO @ Tue, 09 Oct 2018 23:57:45: 10000000 INFO @ Tue, 09 Oct 2018 23:57:48: 11000000 INFO @ Tue, 09 Oct 2018 23:57:49: 11000000 INFO @ Tue, 09 Oct 2018 23:57:51: 11000000 INFO @ Tue, 09 Oct 2018 23:57:54: 12000000 INFO @ Tue, 09 Oct 2018 23:57:55: 12000000 INFO @ Tue, 09 Oct 2018 23:57:57: 12000000 INFO @ Tue, 09 Oct 2018 23:58:00: 13000000 INFO @ Tue, 09 Oct 2018 23:58:03: 13000000 INFO @ Tue, 09 Oct 2018 23:58:05: 13000000 INFO @ Tue, 09 Oct 2018 23:58:06: 14000000 INFO @ Tue, 09 Oct 2018 23:58:09: 14000000 INFO @ Tue, 09 Oct 2018 23:58:12: 14000000 INFO @ Tue, 09 Oct 2018 23:58:13: 15000000 INFO @ Tue, 09 Oct 2018 23:58:16: 15000000 INFO @ Tue, 09 Oct 2018 23:58:18: 15000000 INFO @ Tue, 09 Oct 2018 23:58:19: 16000000 INFO @ Tue, 09 Oct 2018 23:58:22: 16000000 INFO @ Tue, 09 Oct 2018 23:58:25: 16000000 INFO @ Tue, 09 Oct 2018 23:58:25: 17000000 INFO @ Tue, 09 Oct 2018 23:58:29: 17000000 INFO @ Tue, 09 Oct 2018 23:58:32: 18000000 INFO @ Tue, 09 Oct 2018 23:58:32: 17000000 INFO @ Tue, 09 Oct 2018 23:58:36: 18000000 INFO @ Tue, 09 Oct 2018 23:58:38: 19000000 INFO @ Tue, 09 Oct 2018 23:58:39: 18000000 INFO @ Tue, 09 Oct 2018 23:58:42: 19000000 INFO @ Tue, 09 Oct 2018 23:58:43: 20000000 INFO @ Tue, 09 Oct 2018 23:58:45: 19000000 INFO @ Tue, 09 Oct 2018 23:58:48: 20000000 INFO @ Tue, 09 Oct 2018 23:58:49: 21000000 INFO @ Tue, 09 Oct 2018 23:58:52: 20000000 INFO @ Tue, 09 Oct 2018 23:58:55: 21000000 INFO @ Tue, 09 Oct 2018 23:58:56: 22000000 INFO @ Tue, 09 Oct 2018 23:58:59: 21000000 INFO @ Tue, 09 Oct 2018 23:59:01: 23000000 INFO @ Tue, 09 Oct 2018 23:59:02: 22000000 INFO @ Tue, 09 Oct 2018 23:59:06: 22000000 INFO @ Tue, 09 Oct 2018 23:59:07: 24000000 INFO @ Tue, 09 Oct 2018 23:59:09: 23000000 INFO @ Tue, 09 Oct 2018 23:59:13: 25000000 INFO @ Tue, 09 Oct 2018 23:59:13: 23000000 INFO @ Tue, 09 Oct 2018 23:59:15: 24000000 INFO @ Tue, 09 Oct 2018 23:59:19: 26000000 INFO @ Tue, 09 Oct 2018 23:59:20: 24000000 INFO @ Tue, 09 Oct 2018 23:59:22: 25000000 INFO @ Tue, 09 Oct 2018 23:59:24: 27000000 INFO @ Tue, 09 Oct 2018 23:59:27: 25000000 INFO @ Tue, 09 Oct 2018 23:59:29: 26000000 INFO @ Tue, 09 Oct 2018 23:59:30: 28000000 INFO @ Tue, 09 Oct 2018 23:59:33: 26000000 INFO @ Tue, 09 Oct 2018 23:59:35: 27000000 INFO @ Tue, 09 Oct 2018 23:59:36: 29000000 INFO @ Tue, 09 Oct 2018 23:59:40: 27000000 INFO @ Tue, 09 Oct 2018 23:59:41: 30000000 INFO @ Tue, 09 Oct 2018 23:59:42: 28000000 INFO @ Tue, 09 Oct 2018 23:59:47: 28000000 INFO @ Tue, 09 Oct 2018 23:59:47: 31000000 INFO @ Tue, 09 Oct 2018 23:59:49: 29000000 INFO @ Tue, 09 Oct 2018 23:59:53: 32000000 INFO @ Tue, 09 Oct 2018 23:59:54: 29000000 INFO @ Tue, 09 Oct 2018 23:59:55: 30000000 INFO @ Tue, 09 Oct 2018 23:59:59: 33000000 INFO @ Wed, 10 Oct 2018 00:00:00: 30000000 INFO @ Wed, 10 Oct 2018 00:00:01: 31000000 INFO @ Wed, 10 Oct 2018 00:00:05: 34000000 INFO @ Wed, 10 Oct 2018 00:00:07: 31000000 INFO @ Wed, 10 Oct 2018 00:00:07: 32000000 INFO @ Wed, 10 Oct 2018 00:00:11: 35000000 INFO @ Wed, 10 Oct 2018 00:00:14: 32000000 INFO @ Wed, 10 Oct 2018 00:00:14: 33000000 INFO @ Wed, 10 Oct 2018 00:00:16: 36000000 INFO @ Wed, 10 Oct 2018 00:00:20: 33000000 INFO @ Wed, 10 Oct 2018 00:00:20: 34000000 INFO @ Wed, 10 Oct 2018 00:00:22: 37000000 INFO @ Wed, 10 Oct 2018 00:00:26: 34000000 INFO @ Wed, 10 Oct 2018 00:00:27: 35000000 INFO @ Wed, 10 Oct 2018 00:00:28: 38000000 INFO @ Wed, 10 Oct 2018 00:00:33: 36000000 INFO @ Wed, 10 Oct 2018 00:00:33: 35000000 INFO @ Wed, 10 Oct 2018 00:00:33: 39000000 INFO @ Wed, 10 Oct 2018 00:00:39: 40000000 INFO @ Wed, 10 Oct 2018 00:00:39: 37000000 INFO @ Wed, 10 Oct 2018 00:00:40: 36000000 INFO @ Wed, 10 Oct 2018 00:00:45: 41000000 INFO @ Wed, 10 Oct 2018 00:00:46: 38000000 INFO @ Wed, 10 Oct 2018 00:00:46: 37000000 INFO @ Wed, 10 Oct 2018 00:00:51: 42000000 INFO @ Wed, 10 Oct 2018 00:00:52: 39000000 INFO @ Wed, 10 Oct 2018 00:00:52: 38000000 INFO @ Wed, 10 Oct 2018 00:00:56: 43000000 INFO @ Wed, 10 Oct 2018 00:00:58: 40000000 INFO @ Wed, 10 Oct 2018 00:00:59: 39000000 INFO @ Wed, 10 Oct 2018 00:01:02: 44000000 INFO @ Wed, 10 Oct 2018 00:01:04: 41000000 INFO @ Wed, 10 Oct 2018 00:01:05: 40000000 INFO @ Wed, 10 Oct 2018 00:01:08: 45000000 INFO @ Wed, 10 Oct 2018 00:01:11: 42000000 INFO @ Wed, 10 Oct 2018 00:01:12: 41000000 INFO @ Wed, 10 Oct 2018 00:01:14: 46000000 INFO @ Wed, 10 Oct 2018 00:01:17: 43000000 INFO @ Wed, 10 Oct 2018 00:01:18: 42000000 INFO @ Wed, 10 Oct 2018 00:01:19: 47000000 INFO @ Wed, 10 Oct 2018 00:01:23: 44000000 INFO @ Wed, 10 Oct 2018 00:01:25: 43000000 INFO @ Wed, 10 Oct 2018 00:01:25: 48000000 INFO @ Wed, 10 Oct 2018 00:01:30: 45000000 INFO @ Wed, 10 Oct 2018 00:01:31: 49000000 INFO @ Wed, 10 Oct 2018 00:01:31: 44000000 INFO @ Wed, 10 Oct 2018 00:01:36: 46000000 INFO @ Wed, 10 Oct 2018 00:01:37: 50000000 INFO @ Wed, 10 Oct 2018 00:01:38: 45000000 INFO @ Wed, 10 Oct 2018 00:01:42: 47000000 INFO @ Wed, 10 Oct 2018 00:01:42: 51000000 INFO @ Wed, 10 Oct 2018 00:01:44: 46000000 INFO @ Wed, 10 Oct 2018 00:01:48: 52000000 INFO @ Wed, 10 Oct 2018 00:01:48: 48000000 INFO @ Wed, 10 Oct 2018 00:01:51: 47000000 INFO @ Wed, 10 Oct 2018 00:01:55: 53000000 INFO @ Wed, 10 Oct 2018 00:01:56: 49000000 INFO @ Wed, 10 Oct 2018 00:01:58: 48000000 INFO @ Wed, 10 Oct 2018 00:02:02: 54000000 INFO @ Wed, 10 Oct 2018 00:02:03: 50000000 INFO @ Wed, 10 Oct 2018 00:02:06: 49000000 INFO @ Wed, 10 Oct 2018 00:02:08: 55000000 INFO @ Wed, 10 Oct 2018 00:02:10: 51000000 INFO @ Wed, 10 Oct 2018 00:02:13: 50000000 INFO @ Wed, 10 Oct 2018 00:02:15: 56000000 INFO @ Wed, 10 Oct 2018 00:02:17: 52000000 INFO @ Wed, 10 Oct 2018 00:02:20: 51000000 INFO @ Wed, 10 Oct 2018 00:02:21: 57000000 INFO @ Wed, 10 Oct 2018 00:02:24: 53000000 INFO @ Wed, 10 Oct 2018 00:02:28: 52000000 INFO @ Wed, 10 Oct 2018 00:02:28: 58000000 INFO @ Wed, 10 Oct 2018 00:02:32: 54000000 INFO @ Wed, 10 Oct 2018 00:02:34: 59000000 INFO @ Wed, 10 Oct 2018 00:02:35: 53000000 INFO @ Wed, 10 Oct 2018 00:02:39: 55000000 INFO @ Wed, 10 Oct 2018 00:02:41: 60000000 INFO @ Wed, 10 Oct 2018 00:02:42: 54000000 INFO @ Wed, 10 Oct 2018 00:02:46: 56000000 INFO @ Wed, 10 Oct 2018 00:02:47: 61000000 INFO @ Wed, 10 Oct 2018 00:02:50: 55000000 INFO @ Wed, 10 Oct 2018 00:02:54: 57000000 INFO @ Wed, 10 Oct 2018 00:02:54: 62000000 INFO @ Wed, 10 Oct 2018 00:02:57: 56000000 INFO @ Wed, 10 Oct 2018 00:03:00: 63000000 INFO @ Wed, 10 Oct 2018 00:03:01: 58000000 INFO @ Wed, 10 Oct 2018 00:03:05: 57000000 INFO @ Wed, 10 Oct 2018 00:03:08: 64000000 INFO @ Wed, 10 Oct 2018 00:03:09: 59000000 INFO @ Wed, 10 Oct 2018 00:03:13: 58000000 INFO @ Wed, 10 Oct 2018 00:03:16: 65000000 INFO @ Wed, 10 Oct 2018 00:03:17: 60000000 INFO @ Wed, 10 Oct 2018 00:03:21: 59000000 INFO @ Wed, 10 Oct 2018 00:03:23: 66000000 INFO @ Wed, 10 Oct 2018 00:03:25: 61000000 INFO @ Wed, 10 Oct 2018 00:03:29: 60000000 INFO @ Wed, 10 Oct 2018 00:03:30: 67000000 INFO @ Wed, 10 Oct 2018 00:03:33: 62000000 INFO @ Wed, 10 Oct 2018 00:03:37: 61000000 INFO @ Wed, 10 Oct 2018 00:03:38: 68000000 INFO @ Wed, 10 Oct 2018 00:03:40: 63000000 INFO @ Wed, 10 Oct 2018 00:03:44: 69000000 INFO @ Wed, 10 Oct 2018 00:03:45: 62000000 INFO @ Wed, 10 Oct 2018 00:03:48: 64000000 INFO @ Wed, 10 Oct 2018 00:03:51: 70000000 INFO @ Wed, 10 Oct 2018 00:03:52: 63000000 INFO @ Wed, 10 Oct 2018 00:03:55: 65000000 INFO @ Wed, 10 Oct 2018 00:03:58: 71000000 INFO @ Wed, 10 Oct 2018 00:04:00: 64000000 INFO @ Wed, 10 Oct 2018 00:04:03: 66000000 INFO @ Wed, 10 Oct 2018 00:04:05: 72000000 INFO @ Wed, 10 Oct 2018 00:04:07: 65000000 INFO @ Wed, 10 Oct 2018 00:04:10: 67000000 INFO @ Wed, 10 Oct 2018 00:04:12: 73000000 INFO @ Wed, 10 Oct 2018 00:04:15: 66000000 INFO @ Wed, 10 Oct 2018 00:04:17: 68000000 INFO @ Wed, 10 Oct 2018 00:04:18: 74000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 10 Oct 2018 00:04:23: 67000000 INFO @ Wed, 10 Oct 2018 00:04:25: 69000000 INFO @ Wed, 10 Oct 2018 00:04:25: 75000000 INFO @ Wed, 10 Oct 2018 00:04:30: 68000000 INFO @ Wed, 10 Oct 2018 00:04:32: 76000000 INFO @ Wed, 10 Oct 2018 00:04:33: 70000000 INFO @ Wed, 10 Oct 2018 00:04:38: 69000000 INFO @ Wed, 10 Oct 2018 00:04:39: 77000000 INFO @ Wed, 10 Oct 2018 00:04:40: 71000000 BigWig に変換しました。 INFO @ Wed, 10 Oct 2018 00:04:46: 70000000 INFO @ Wed, 10 Oct 2018 00:04:46: 78000000 INFO @ Wed, 10 Oct 2018 00:04:48: 72000000 INFO @ Wed, 10 Oct 2018 00:04:53: 79000000 INFO @ Wed, 10 Oct 2018 00:04:54: 71000000 INFO @ Wed, 10 Oct 2018 00:04:55: 73000000 INFO @ Wed, 10 Oct 2018 00:05:00: 80000000 INFO @ Wed, 10 Oct 2018 00:05:01: 72000000 INFO @ Wed, 10 Oct 2018 00:05:03: 74000000 INFO @ Wed, 10 Oct 2018 00:05:07: 81000000 INFO @ Wed, 10 Oct 2018 00:05:09: 73000000 INFO @ Wed, 10 Oct 2018 00:05:11: 75000000 INFO @ Wed, 10 Oct 2018 00:05:14: 82000000 INFO @ Wed, 10 Oct 2018 00:05:17: 74000000 INFO @ Wed, 10 Oct 2018 00:05:18: 76000000 INFO @ Wed, 10 Oct 2018 00:05:21: 83000000 INFO @ Wed, 10 Oct 2018 00:05:25: 75000000 INFO @ Wed, 10 Oct 2018 00:05:26: 77000000 INFO @ Wed, 10 Oct 2018 00:05:28: 84000000 INFO @ Wed, 10 Oct 2018 00:05:33: 76000000 INFO @ Wed, 10 Oct 2018 00:05:33: 78000000 INFO @ Wed, 10 Oct 2018 00:05:34: 85000000 INFO @ Wed, 10 Oct 2018 00:05:40: 77000000 INFO @ Wed, 10 Oct 2018 00:05:40: 86000000 INFO @ Wed, 10 Oct 2018 00:05:41: 79000000 INFO @ Wed, 10 Oct 2018 00:05:46: 87000000 INFO @ Wed, 10 Oct 2018 00:05:48: 78000000 INFO @ Wed, 10 Oct 2018 00:05:49: 80000000 INFO @ Wed, 10 Oct 2018 00:05:52: 88000000 INFO @ Wed, 10 Oct 2018 00:05:55: 79000000 INFO @ Wed, 10 Oct 2018 00:05:55: 81000000 INFO @ Wed, 10 Oct 2018 00:05:58: 89000000 INFO @ Wed, 10 Oct 2018 00:06:02: 80000000 INFO @ Wed, 10 Oct 2018 00:06:02: 82000000 INFO @ Wed, 10 Oct 2018 00:06:04: 90000000 INFO @ Wed, 10 Oct 2018 00:06:08: 81000000 INFO @ Wed, 10 Oct 2018 00:06:08: 83000000 INFO @ Wed, 10 Oct 2018 00:06:10: 91000000 INFO @ Wed, 10 Oct 2018 00:06:16: 84000000 INFO @ Wed, 10 Oct 2018 00:06:16: 82000000 INFO @ Wed, 10 Oct 2018 00:06:16: 92000000 INFO @ Wed, 10 Oct 2018 00:06:22: 93000000 INFO @ Wed, 10 Oct 2018 00:06:22: 85000000 INFO @ Wed, 10 Oct 2018 00:06:23: 83000000 INFO @ Wed, 10 Oct 2018 00:06:28: 94000000 INFO @ Wed, 10 Oct 2018 00:06:29: 86000000 INFO @ Wed, 10 Oct 2018 00:06:30: 84000000 INFO @ Wed, 10 Oct 2018 00:06:34: 95000000 INFO @ Wed, 10 Oct 2018 00:06:36: 87000000 INFO @ Wed, 10 Oct 2018 00:06:36: 85000000 INFO @ Wed, 10 Oct 2018 00:06:39: 96000000 INFO @ Wed, 10 Oct 2018 00:06:42: 88000000 INFO @ Wed, 10 Oct 2018 00:06:43: 86000000 INFO @ Wed, 10 Oct 2018 00:06:45: 97000000 INFO @ Wed, 10 Oct 2018 00:06:49: 89000000 INFO @ Wed, 10 Oct 2018 00:06:50: 87000000 INFO @ Wed, 10 Oct 2018 00:06:51: 98000000 INFO @ Wed, 10 Oct 2018 00:06:55: 90000000 INFO @ Wed, 10 Oct 2018 00:06:57: 88000000 INFO @ Wed, 10 Oct 2018 00:06:57: 99000000 INFO @ Wed, 10 Oct 2018 00:07:02: 91000000 INFO @ Wed, 10 Oct 2018 00:07:04: 100000000 INFO @ Wed, 10 Oct 2018 00:07:04: 89000000 INFO @ Wed, 10 Oct 2018 00:07:09: 92000000 INFO @ Wed, 10 Oct 2018 00:07:10: 101000000 INFO @ Wed, 10 Oct 2018 00:07:11: 90000000 INFO @ Wed, 10 Oct 2018 00:07:16: 93000000 INFO @ Wed, 10 Oct 2018 00:07:16: 102000000 INFO @ Wed, 10 Oct 2018 00:07:18: 91000000 INFO @ Wed, 10 Oct 2018 00:07:20: #1 tag size is determined as 50 bps INFO @ Wed, 10 Oct 2018 00:07:20: #1 tag size = 50 INFO @ Wed, 10 Oct 2018 00:07:20: #1 total tags in treatment: 50201583 INFO @ Wed, 10 Oct 2018 00:07:20: #1 user defined the maximum tags... INFO @ Wed, 10 Oct 2018 00:07:20: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 10 Oct 2018 00:07:21: #1 tags after filtering in treatment: 19455617 INFO @ Wed, 10 Oct 2018 00:07:21: #1 Redundant rate of treatment: 0.61 INFO @ Wed, 10 Oct 2018 00:07:21: #1 finished! INFO @ Wed, 10 Oct 2018 00:07:21: #2 Build Peak Model... INFO @ Wed, 10 Oct 2018 00:07:21: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 10 Oct 2018 00:07:22: #2 number of paired peaks: 0 WARNING @ Wed, 10 Oct 2018 00:07:22: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 10 Oct 2018 00:07:22: Process for pairing-model is terminated! cat: SRX4065336.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4065336.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065336.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065336.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 10 Oct 2018 00:07:23: 94000000 INFO @ Wed, 10 Oct 2018 00:07:25: 92000000 INFO @ Wed, 10 Oct 2018 00:07:30: 95000000 INFO @ Wed, 10 Oct 2018 00:07:32: 93000000 INFO @ Wed, 10 Oct 2018 00:07:37: 96000000 INFO @ Wed, 10 Oct 2018 00:07:39: 94000000 INFO @ Wed, 10 Oct 2018 00:07:43: 97000000 INFO @ Wed, 10 Oct 2018 00:07:46: 95000000 INFO @ Wed, 10 Oct 2018 00:07:50: 98000000 INFO @ Wed, 10 Oct 2018 00:07:53: 96000000 INFO @ Wed, 10 Oct 2018 00:07:57: 99000000 INFO @ Wed, 10 Oct 2018 00:08:00: 97000000 INFO @ Wed, 10 Oct 2018 00:08:04: 100000000 INFO @ Wed, 10 Oct 2018 00:08:07: 98000000 INFO @ Wed, 10 Oct 2018 00:08:11: 101000000 INFO @ Wed, 10 Oct 2018 00:08:14: 99000000 INFO @ Wed, 10 Oct 2018 00:08:18: 102000000 INFO @ Wed, 10 Oct 2018 00:08:21: 100000000 INFO @ Wed, 10 Oct 2018 00:08:22: #1 tag size is determined as 50 bps INFO @ Wed, 10 Oct 2018 00:08:22: #1 tag size = 50 INFO @ Wed, 10 Oct 2018 00:08:22: #1 total tags in treatment: 50201583 INFO @ Wed, 10 Oct 2018 00:08:22: #1 user defined the maximum tags... INFO @ Wed, 10 Oct 2018 00:08:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 10 Oct 2018 00:08:23: #1 tags after filtering in treatment: 19455617 INFO @ Wed, 10 Oct 2018 00:08:23: #1 Redundant rate of treatment: 0.61 INFO @ Wed, 10 Oct 2018 00:08:23: #1 finished! INFO @ Wed, 10 Oct 2018 00:08:23: #2 Build Peak Model... INFO @ Wed, 10 Oct 2018 00:08:23: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 10 Oct 2018 00:08:24: #2 number of paired peaks: 0 WARNING @ Wed, 10 Oct 2018 00:08:24: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 10 Oct 2018 00:08:24: Process for pairing-model is terminated! cat: SRX4065336.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4065336.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065336.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065336.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 10 Oct 2018 00:08:27: 101000000 INFO @ Wed, 10 Oct 2018 00:08:33: 102000000 INFO @ Wed, 10 Oct 2018 00:08:37: #1 tag size is determined as 50 bps INFO @ Wed, 10 Oct 2018 00:08:37: #1 tag size = 50 INFO @ Wed, 10 Oct 2018 00:08:37: #1 total tags in treatment: 50201583 INFO @ Wed, 10 Oct 2018 00:08:37: #1 user defined the maximum tags... INFO @ Wed, 10 Oct 2018 00:08:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 10 Oct 2018 00:08:38: #1 tags after filtering in treatment: 19455617 INFO @ Wed, 10 Oct 2018 00:08:38: #1 Redundant rate of treatment: 0.61 INFO @ Wed, 10 Oct 2018 00:08:38: #1 finished! INFO @ Wed, 10 Oct 2018 00:08:38: #2 Build Peak Model... INFO @ Wed, 10 Oct 2018 00:08:38: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 10 Oct 2018 00:08:39: #2 number of paired peaks: 0 WARNING @ Wed, 10 Oct 2018 00:08:39: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 10 Oct 2018 00:08:39: Process for pairing-model is terminated! cat: SRX4065336.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX4065336.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065336.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX4065336.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling