Job ID = 9160178 sra ファイルのダウンロード中... Completed: 2635827K bytes transferred in 153 seconds (140918K bits/sec), in 1 file, 2 directories. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Written 61752934 spots for /home/okishinya/chipatlas/results/sacCer3/SRX2831025/SRR5572342.sra Written 61752934 spots total rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:48:18 61752934 reads; of these: 61752934 (100.00%) were paired; of these: 1819214 (2.95%) aligned concordantly 0 times 52092702 (84.36%) aligned concordantly exactly 1 time 7841018 (12.70%) aligned concordantly >1 times ---- 1819214 pairs aligned concordantly 0 times; of these: 84287 (4.63%) aligned discordantly 1 time ---- 1734927 pairs aligned 0 times concordantly or discordantly; of these: 3469854 mates make up the pairs; of these: 3222745 (92.88%) aligned 0 times 159828 (4.61%) aligned exactly 1 time 87281 (2.52%) aligned >1 times 97.39% overall alignment rate Time searching: 00:48:18 Overall time: 00:48:18 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 52 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 6972665 / 60000907 = 0.1162 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Wed, 28 Jun 2017 03:23:55: # Command line: callpeak -t SRX2831025.bam -f BAM -g 12100000 -n SRX2831025.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX2831025.05 # format = BAM # ChIP-seq file = ['SRX2831025.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 03:23:55: #1 read tag files... INFO @ Wed, 28 Jun 2017 03:23:55: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 03:23:55: # Command line: callpeak -t SRX2831025.bam -f BAM -g 12100000 -n SRX2831025.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX2831025.10 # format = BAM # ChIP-seq file = ['SRX2831025.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 03:23:55: #1 read tag files... INFO @ Wed, 28 Jun 2017 03:23:55: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 03:23:55: # Command line: callpeak -t SRX2831025.bam -f BAM -g 12100000 -n SRX2831025.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX2831025.20 # format = BAM # ChIP-seq file = ['SRX2831025.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 03:23:55: #1 read tag files... INFO @ Wed, 28 Jun 2017 03:23:55: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 03:24:00: 1000000 INFO @ Wed, 28 Jun 2017 03:24:00: 1000000 INFO @ Wed, 28 Jun 2017 03:24:01: 1000000 INFO @ Wed, 28 Jun 2017 03:24:06: 2000000 INFO @ Wed, 28 Jun 2017 03:24:06: 2000000 INFO @ Wed, 28 Jun 2017 03:24:07: 2000000 INFO @ Wed, 28 Jun 2017 03:24:11: 3000000 INFO @ Wed, 28 Jun 2017 03:24:11: 3000000 INFO @ Wed, 28 Jun 2017 03:24:13: 3000000 INFO @ Wed, 28 Jun 2017 03:24:17: 4000000 INFO @ Wed, 28 Jun 2017 03:24:17: 4000000 INFO @ Wed, 28 Jun 2017 03:24:18: 4000000 INFO @ Wed, 28 Jun 2017 03:24:22: 5000000 INFO @ Wed, 28 Jun 2017 03:24:22: 5000000 INFO @ Wed, 28 Jun 2017 03:24:24: 5000000 INFO @ Wed, 28 Jun 2017 03:24:28: 6000000 INFO @ Wed, 28 Jun 2017 03:24:28: 6000000 INFO @ Wed, 28 Jun 2017 03:24:30: 6000000 INFO @ Wed, 28 Jun 2017 03:24:33: 7000000 INFO @ Wed, 28 Jun 2017 03:24:33: 7000000 INFO @ Wed, 28 Jun 2017 03:24:35: 7000000 INFO @ Wed, 28 Jun 2017 03:24:38: 8000000 INFO @ Wed, 28 Jun 2017 03:24:38: 8000000 INFO @ Wed, 28 Jun 2017 03:24:41: 8000000 INFO @ Wed, 28 Jun 2017 03:24:44: 9000000 INFO @ Wed, 28 Jun 2017 03:24:44: 9000000 INFO @ Wed, 28 Jun 2017 03:24:47: 9000000 INFO @ Wed, 28 Jun 2017 03:24:49: 10000000 INFO @ Wed, 28 Jun 2017 03:24:49: 10000000 INFO @ Wed, 28 Jun 2017 03:24:52: 10000000 INFO @ Wed, 28 Jun 2017 03:24:55: 11000000 INFO @ Wed, 28 Jun 2017 03:24:55: 11000000 INFO @ Wed, 28 Jun 2017 03:24:58: 11000000 INFO @ Wed, 28 Jun 2017 03:25:00: 12000000 INFO @ Wed, 28 Jun 2017 03:25:00: 12000000 INFO @ Wed, 28 Jun 2017 03:25:03: 12000000 INFO @ Wed, 28 Jun 2017 03:25:06: 13000000 INFO @ Wed, 28 Jun 2017 03:25:06: 13000000 INFO @ Wed, 28 Jun 2017 03:25:10: 13000000 INFO @ Wed, 28 Jun 2017 03:25:13: 14000000 INFO @ Wed, 28 Jun 2017 03:25:13: 14000000 INFO @ Wed, 28 Jun 2017 03:25:17: 14000000 INFO @ Wed, 28 Jun 2017 03:25:19: 15000000 INFO @ Wed, 28 Jun 2017 03:25:20: 15000000 INFO @ Wed, 28 Jun 2017 03:25:25: 15000000 INFO @ Wed, 28 Jun 2017 03:25:26: 16000000 INFO @ Wed, 28 Jun 2017 03:25:26: 16000000 INFO @ Wed, 28 Jun 2017 03:25:32: 16000000 INFO @ Wed, 28 Jun 2017 03:25:33: 17000000 INFO @ Wed, 28 Jun 2017 03:25:33: 17000000 INFO @ Wed, 28 Jun 2017 03:25:39: 17000000 INFO @ Wed, 28 Jun 2017 03:25:40: 18000000 INFO @ Wed, 28 Jun 2017 03:25:40: 18000000 INFO @ Wed, 28 Jun 2017 03:25:45: 18000000 INFO @ Wed, 28 Jun 2017 03:25:46: 19000000 INFO @ Wed, 28 Jun 2017 03:25:46: 19000000 INFO @ Wed, 28 Jun 2017 03:25:50: 19000000 INFO @ Wed, 28 Jun 2017 03:25:52: 20000000 INFO @ Wed, 28 Jun 2017 03:25:52: 20000000 INFO @ Wed, 28 Jun 2017 03:25:56: 20000000 INFO @ Wed, 28 Jun 2017 03:25:58: 21000000 INFO @ Wed, 28 Jun 2017 03:25:58: 21000000 INFO @ Wed, 28 Jun 2017 03:26:02: 21000000 INFO @ Wed, 28 Jun 2017 03:26:03: 22000000 INFO @ Wed, 28 Jun 2017 03:26:04: 22000000 INFO @ Wed, 28 Jun 2017 03:26:07: 22000000 INFO @ Wed, 28 Jun 2017 03:26:09: 23000000 INFO @ Wed, 28 Jun 2017 03:26:09: 23000000 INFO @ Wed, 28 Jun 2017 03:26:13: 23000000 INFO @ Wed, 28 Jun 2017 03:26:15: 24000000 INFO @ Wed, 28 Jun 2017 03:26:15: 24000000 INFO @ Wed, 28 Jun 2017 03:26:18: 24000000 INFO @ Wed, 28 Jun 2017 03:26:21: 25000000 INFO @ Wed, 28 Jun 2017 03:26:21: 25000000 INFO @ Wed, 28 Jun 2017 03:26:25: 25000000 INFO @ Wed, 28 Jun 2017 03:26:27: 26000000 INFO @ Wed, 28 Jun 2017 03:26:27: 26000000 INFO @ Wed, 28 Jun 2017 03:26:31: 26000000 INFO @ Wed, 28 Jun 2017 03:26:32: 27000000 INFO @ Wed, 28 Jun 2017 03:26:33: 27000000 INFO @ Wed, 28 Jun 2017 03:26:36: 27000000 INFO @ Wed, 28 Jun 2017 03:26:38: 28000000 INFO @ Wed, 28 Jun 2017 03:26:38: 28000000 INFO @ Wed, 28 Jun 2017 03:26:42: 28000000 INFO @ Wed, 28 Jun 2017 03:26:43: 29000000 INFO @ Wed, 28 Jun 2017 03:26:44: 29000000 INFO @ Wed, 28 Jun 2017 03:26:48: 29000000 INFO @ Wed, 28 Jun 2017 03:26:49: 30000000 INFO @ Wed, 28 Jun 2017 03:26:49: 30000000 INFO @ Wed, 28 Jun 2017 03:26:53: 30000000 INFO @ Wed, 28 Jun 2017 03:26:54: 31000000 INFO @ Wed, 28 Jun 2017 03:26:55: 31000000 INFO @ Wed, 28 Jun 2017 03:26:59: 31000000 INFO @ Wed, 28 Jun 2017 03:26:59: 32000000 INFO @ Wed, 28 Jun 2017 03:27:01: 32000000 INFO @ Wed, 28 Jun 2017 03:27:05: 33000000 INFO @ Wed, 28 Jun 2017 03:27:05: 32000000 INFO @ Wed, 28 Jun 2017 03:27:08: 33000000 INFO @ Wed, 28 Jun 2017 03:27:10: 34000000 INFO @ Wed, 28 Jun 2017 03:27:11: 33000000 INFO @ Wed, 28 Jun 2017 03:27:14: 34000000 INFO @ Wed, 28 Jun 2017 03:27:15: 35000000 INFO @ Wed, 28 Jun 2017 03:27:16: 34000000 INFO @ Wed, 28 Jun 2017 03:27:20: 35000000 INFO @ Wed, 28 Jun 2017 03:27:21: 36000000 INFO @ Wed, 28 Jun 2017 03:27:22: 35000000 INFO @ Wed, 28 Jun 2017 03:27:26: 37000000 INFO @ Wed, 28 Jun 2017 03:27:27: 36000000 INFO @ Wed, 28 Jun 2017 03:27:29: 36000000 INFO @ Wed, 28 Jun 2017 03:27:33: 38000000 INFO @ Wed, 28 Jun 2017 03:27:35: 37000000 INFO @ Wed, 28 Jun 2017 03:27:36: 37000000 INFO @ Wed, 28 Jun 2017 03:27:40: 39000000 INFO @ Wed, 28 Jun 2017 03:27:43: 38000000 INFO @ Wed, 28 Jun 2017 03:27:43: 38000000 INFO @ Wed, 28 Jun 2017 03:27:47: 40000000 INFO @ Wed, 28 Jun 2017 03:27:50: 39000000 INFO @ Wed, 28 Jun 2017 03:27:51: 39000000 INFO @ Wed, 28 Jun 2017 03:27:55: 41000000 INFO @ Wed, 28 Jun 2017 03:27:57: 40000000 INFO @ Wed, 28 Jun 2017 03:27:58: 40000000 INFO @ Wed, 28 Jun 2017 03:28:00: 42000000 INFO @ Wed, 28 Jun 2017 03:28:03: 41000000 INFO @ Wed, 28 Jun 2017 03:28:05: 41000000 INFO @ Wed, 28 Jun 2017 03:28:06: 43000000 INFO @ Wed, 28 Jun 2017 03:28:09: 42000000 INFO @ Wed, 28 Jun 2017 03:28:11: 44000000 INFO @ Wed, 28 Jun 2017 03:28:12: 42000000 INFO @ Wed, 28 Jun 2017 03:28:15: 43000000 INFO @ Wed, 28 Jun 2017 03:28:17: 45000000 INFO @ Wed, 28 Jun 2017 03:28:18: 43000000 INFO @ Wed, 28 Jun 2017 03:28:21: 44000000 INFO @ Wed, 28 Jun 2017 03:28:22: 46000000 INFO @ Wed, 28 Jun 2017 03:28:25: 44000000 INFO @ Wed, 28 Jun 2017 03:28:27: 45000000 INFO @ Wed, 28 Jun 2017 03:28:27: 47000000 INFO @ Wed, 28 Jun 2017 03:28:31: 45000000 INFO @ Wed, 28 Jun 2017 03:28:33: 48000000 INFO @ Wed, 28 Jun 2017 03:28:33: 46000000 INFO @ Wed, 28 Jun 2017 03:28:38: 46000000 INFO @ Wed, 28 Jun 2017 03:28:38: 49000000 INFO @ Wed, 28 Jun 2017 03:28:39: 47000000 INFO @ Wed, 28 Jun 2017 03:28:43: 50000000 INFO @ Wed, 28 Jun 2017 03:28:44: 47000000 INFO @ Wed, 28 Jun 2017 03:28:45: 48000000 INFO @ Wed, 28 Jun 2017 03:28:50: 51000000 INFO @ Wed, 28 Jun 2017 03:28:52: 48000000 INFO @ Wed, 28 Jun 2017 03:28:52: 49000000 INFO @ Wed, 28 Jun 2017 03:28:56: 52000000 INFO @ Wed, 28 Jun 2017 03:28:59: 50000000 INFO @ Wed, 28 Jun 2017 03:29:00: 49000000 INFO @ Wed, 28 Jun 2017 03:29:03: 53000000 INFO @ Wed, 28 Jun 2017 03:29:05: 51000000 INFO @ Wed, 28 Jun 2017 03:29:07: 50000000 INFO @ Wed, 28 Jun 2017 03:29:09: 54000000 INFO @ Wed, 28 Jun 2017 03:29:12: 52000000 INFO @ Wed, 28 Jun 2017 03:29:15: 51000000 INFO @ Wed, 28 Jun 2017 03:29:16: 55000000 INFO @ Wed, 28 Jun 2017 03:29:19: 53000000 INFO @ Wed, 28 Jun 2017 03:29:22: 56000000 INFO @ Wed, 28 Jun 2017 03:29:22: 52000000 INFO @ Wed, 28 Jun 2017 03:29:25: 54000000 INFO @ Wed, 28 Jun 2017 03:29:28: 57000000 INFO @ Wed, 28 Jun 2017 03:29:29: 53000000 INFO @ Wed, 28 Jun 2017 03:29:31: 55000000 INFO @ Wed, 28 Jun 2017 03:29:33: 58000000 INFO @ Wed, 28 Jun 2017 03:29:35: 54000000 INFO @ Wed, 28 Jun 2017 03:29:37: 56000000 INFO @ Wed, 28 Jun 2017 03:29:38: 59000000 INFO @ Wed, 28 Jun 2017 03:29:41: 55000000 INFO @ Wed, 28 Jun 2017 03:29:43: 57000000 INFO @ Wed, 28 Jun 2017 03:29:43: 60000000 INFO @ Wed, 28 Jun 2017 03:29:47: 56000000 INFO @ Wed, 28 Jun 2017 03:29:49: 58000000 INFO @ Wed, 28 Jun 2017 03:29:49: 61000000 INFO @ Wed, 28 Jun 2017 03:29:54: 57000000 INFO @ Wed, 28 Jun 2017 03:29:54: 62000000 INFO @ Wed, 28 Jun 2017 03:29:54: 59000000 INFO @ Wed, 28 Jun 2017 03:29:59: 63000000 INFO @ Wed, 28 Jun 2017 03:30:00: 58000000 INFO @ Wed, 28 Jun 2017 03:30:00: 60000000 INFO @ Wed, 28 Jun 2017 03:30:05: 64000000 INFO @ Wed, 28 Jun 2017 03:30:06: 61000000 INFO @ Wed, 28 Jun 2017 03:30:06: 59000000 INFO @ Wed, 28 Jun 2017 03:30:11: 65000000 INFO @ Wed, 28 Jun 2017 03:30:13: 62000000 INFO @ Wed, 28 Jun 2017 03:30:13: 60000000 INFO @ Wed, 28 Jun 2017 03:30:18: 66000000 INFO @ Wed, 28 Jun 2017 03:30:19: 63000000 INFO @ Wed, 28 Jun 2017 03:30:21: 61000000 INFO @ Wed, 28 Jun 2017 03:30:25: 67000000 INFO @ Wed, 28 Jun 2017 03:30:26: 64000000 INFO @ Wed, 28 Jun 2017 03:30:28: 62000000 INFO @ Wed, 28 Jun 2017 03:30:32: 65000000 INFO @ Wed, 28 Jun 2017 03:30:33: 68000000 INFO @ Wed, 28 Jun 2017 03:30:36: 63000000 INFO @ Wed, 28 Jun 2017 03:30:39: 66000000 INFO @ Wed, 28 Jun 2017 03:30:41: 69000000 INFO @ Wed, 28 Jun 2017 03:30:44: 64000000 INFO @ Wed, 28 Jun 2017 03:30:45: 67000000 INFO @ Wed, 28 Jun 2017 03:30:48: 70000000 INFO @ Wed, 28 Jun 2017 03:30:51: 65000000 INFO @ Wed, 28 Jun 2017 03:30:52: 68000000 INFO @ Wed, 28 Jun 2017 03:30:56: 71000000 INFO @ Wed, 28 Jun 2017 03:30:59: 69000000 INFO @ Wed, 28 Jun 2017 03:30:59: 66000000 INFO @ Wed, 28 Jun 2017 03:31:03: 72000000 INFO @ Wed, 28 Jun 2017 03:31:06: 70000000 INFO @ Wed, 28 Jun 2017 03:31:07: 67000000 INFO @ Wed, 28 Jun 2017 03:31:10: 73000000 INFO @ Wed, 28 Jun 2017 03:31:12: 71000000 INFO @ Wed, 28 Jun 2017 03:31:13: 68000000 INFO @ Wed, 28 Jun 2017 03:31:15: 74000000 INFO @ Wed, 28 Jun 2017 03:31:18: 72000000 INFO @ Wed, 28 Jun 2017 03:31:20: 69000000 INFO @ Wed, 28 Jun 2017 03:31:20: 75000000 INFO @ Wed, 28 Jun 2017 03:31:24: 73000000 INFO @ Wed, 28 Jun 2017 03:31:26: 76000000 INFO @ Wed, 28 Jun 2017 03:31:27: 70000000 INFO @ Wed, 28 Jun 2017 03:31:30: 74000000 INFO @ Wed, 28 Jun 2017 03:31:31: 77000000 INFO @ Wed, 28 Jun 2017 03:31:33: 71000000 INFO @ Wed, 28 Jun 2017 03:31:36: 78000000 INFO @ Wed, 28 Jun 2017 03:31:36: 75000000 INFO @ Wed, 28 Jun 2017 03:31:41: 72000000 INFO @ Wed, 28 Jun 2017 03:31:43: 79000000 INFO @ Wed, 28 Jun 2017 03:31:43: 76000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 28 Jun 2017 03:31:48: 73000000 INFO @ Wed, 28 Jun 2017 03:31:50: 80000000 INFO @ Wed, 28 Jun 2017 03:31:50: 77000000 INFO @ Wed, 28 Jun 2017 03:31:55: 81000000 INFO @ Wed, 28 Jun 2017 03:31:55: 74000000 INFO @ Wed, 28 Jun 2017 03:31:56: 78000000 INFO @ Wed, 28 Jun 2017 03:32:00: 82000000 INFO @ Wed, 28 Jun 2017 03:32:02: 75000000 INFO @ Wed, 28 Jun 2017 03:32:03: 79000000 INFO @ Wed, 28 Jun 2017 03:32:06: 83000000 BigWig に変換しました。 INFO @ Wed, 28 Jun 2017 03:32:09: 76000000 INFO @ Wed, 28 Jun 2017 03:32:09: 80000000 INFO @ Wed, 28 Jun 2017 03:32:12: 84000000 INFO @ Wed, 28 Jun 2017 03:32:17: 81000000 INFO @ Wed, 28 Jun 2017 03:32:17: 77000000 INFO @ Wed, 28 Jun 2017 03:32:19: 85000000 INFO @ Wed, 28 Jun 2017 03:32:24: 82000000 INFO @ Wed, 28 Jun 2017 03:32:24: 78000000 INFO @ Wed, 28 Jun 2017 03:32:25: 86000000 INFO @ Wed, 28 Jun 2017 03:32:30: 87000000 INFO @ Wed, 28 Jun 2017 03:32:31: 83000000 INFO @ Wed, 28 Jun 2017 03:32:32: 79000000 INFO @ Wed, 28 Jun 2017 03:32:36: 88000000 INFO @ Wed, 28 Jun 2017 03:32:37: 84000000 INFO @ Wed, 28 Jun 2017 03:32:39: 80000000 INFO @ Wed, 28 Jun 2017 03:32:41: 89000000 INFO @ Wed, 28 Jun 2017 03:32:43: 85000000 INFO @ Wed, 28 Jun 2017 03:32:45: 81000000 INFO @ Wed, 28 Jun 2017 03:32:46: 90000000 INFO @ Wed, 28 Jun 2017 03:32:49: 86000000 INFO @ Wed, 28 Jun 2017 03:32:52: 91000000 INFO @ Wed, 28 Jun 2017 03:32:52: 82000000 INFO @ Wed, 28 Jun 2017 03:32:56: 87000000 INFO @ Wed, 28 Jun 2017 03:32:57: 92000000 INFO @ Wed, 28 Jun 2017 03:32:58: 83000000 INFO @ Wed, 28 Jun 2017 03:33:02: 88000000 INFO @ Wed, 28 Jun 2017 03:33:02: 93000000 INFO @ Wed, 28 Jun 2017 03:33:04: 84000000 INFO @ Wed, 28 Jun 2017 03:33:07: 94000000 INFO @ Wed, 28 Jun 2017 03:33:08: 89000000 INFO @ Wed, 28 Jun 2017 03:33:11: 85000000 INFO @ Wed, 28 Jun 2017 03:33:13: 95000000 INFO @ Wed, 28 Jun 2017 03:33:14: 90000000 INFO @ Wed, 28 Jun 2017 03:33:18: 96000000 INFO @ Wed, 28 Jun 2017 03:33:18: 86000000 INFO @ Wed, 28 Jun 2017 03:33:21: 91000000 INFO @ Wed, 28 Jun 2017 03:33:23: 97000000 INFO @ Wed, 28 Jun 2017 03:33:25: 87000000 INFO @ Wed, 28 Jun 2017 03:33:27: 92000000 INFO @ Wed, 28 Jun 2017 03:33:29: 98000000 INFO @ Wed, 28 Jun 2017 03:33:32: 88000000 INFO @ Wed, 28 Jun 2017 03:33:34: 93000000 INFO @ Wed, 28 Jun 2017 03:33:34: 99000000 INFO @ Wed, 28 Jun 2017 03:33:38: 89000000 INFO @ Wed, 28 Jun 2017 03:33:39: 100000000 INFO @ Wed, 28 Jun 2017 03:33:40: 94000000 INFO @ Wed, 28 Jun 2017 03:33:45: 101000000 INFO @ Wed, 28 Jun 2017 03:33:45: 90000000 INFO @ Wed, 28 Jun 2017 03:33:46: 95000000 INFO @ Wed, 28 Jun 2017 03:33:50: 102000000 INFO @ Wed, 28 Jun 2017 03:33:52: 91000000 INFO @ Wed, 28 Jun 2017 03:33:52: 96000000 INFO @ Wed, 28 Jun 2017 03:33:55: 103000000 INFO @ Wed, 28 Jun 2017 03:33:59: 97000000 INFO @ Wed, 28 Jun 2017 03:33:59: 92000000 INFO @ Wed, 28 Jun 2017 03:34:00: 104000000 INFO @ Wed, 28 Jun 2017 03:34:05: 98000000 INFO @ Wed, 28 Jun 2017 03:34:06: 93000000 INFO @ Wed, 28 Jun 2017 03:34:06: 105000000 INFO @ Wed, 28 Jun 2017 03:34:11: 106000000 INFO @ Wed, 28 Jun 2017 03:34:12: 99000000 INFO @ Wed, 28 Jun 2017 03:34:13: 94000000 INFO @ Wed, 28 Jun 2017 03:34:14: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 03:34:14: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 03:34:14: #1 total tags in treatment: 52964197 INFO @ Wed, 28 Jun 2017 03:34:14: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 03:34:14: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 03:34:15: #1 tags after filtering in treatment: 20581058 INFO @ Wed, 28 Jun 2017 03:34:15: #1 Redundant rate of treatment: 0.61 INFO @ Wed, 28 Jun 2017 03:34:15: #1 finished! INFO @ Wed, 28 Jun 2017 03:34:15: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 03:34:15: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 03:34:17: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 03:34:17: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 03:34:17: Process for pairing-model is terminated! cat: SRX2831025.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX2831025.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2831025.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2831025.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 03:34:18: 100000000 INFO @ Wed, 28 Jun 2017 03:34:20: 95000000 INFO @ Wed, 28 Jun 2017 03:34:25: 101000000 INFO @ Wed, 28 Jun 2017 03:34:27: 96000000 INFO @ Wed, 28 Jun 2017 03:34:31: 102000000 INFO @ Wed, 28 Jun 2017 03:34:33: 97000000 INFO @ Wed, 28 Jun 2017 03:34:37: 103000000 INFO @ Wed, 28 Jun 2017 03:34:39: 98000000 INFO @ Wed, 28 Jun 2017 03:34:43: 104000000 INFO @ Wed, 28 Jun 2017 03:34:45: 99000000 INFO @ Wed, 28 Jun 2017 03:34:49: 105000000 INFO @ Wed, 28 Jun 2017 03:34:51: 100000000 INFO @ Wed, 28 Jun 2017 03:34:55: 106000000 INFO @ Wed, 28 Jun 2017 03:34:58: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 03:34:58: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 03:34:58: #1 total tags in treatment: 52964197 INFO @ Wed, 28 Jun 2017 03:34:58: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 03:34:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 03:34:58: 101000000 INFO @ Wed, 28 Jun 2017 03:34:59: #1 tags after filtering in treatment: 20581058 INFO @ Wed, 28 Jun 2017 03:34:59: #1 Redundant rate of treatment: 0.61 INFO @ Wed, 28 Jun 2017 03:34:59: #1 finished! INFO @ Wed, 28 Jun 2017 03:34:59: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 03:34:59: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 03:35:00: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 03:35:00: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 03:35:00: Process for pairing-model is terminated! cat: SRX2831025.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX2831025.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2831025.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2831025.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 03:35:05: 102000000 INFO @ Wed, 28 Jun 2017 03:35:10: 103000000 INFO @ Wed, 28 Jun 2017 03:35:15: 104000000 INFO @ Wed, 28 Jun 2017 03:35:20: 105000000 INFO @ Wed, 28 Jun 2017 03:35:26: 106000000 INFO @ Wed, 28 Jun 2017 03:35:28: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 03:35:28: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 03:35:28: #1 total tags in treatment: 52964197 INFO @ Wed, 28 Jun 2017 03:35:28: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 03:35:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 03:35:30: #1 tags after filtering in treatment: 20581058 INFO @ Wed, 28 Jun 2017 03:35:30: #1 Redundant rate of treatment: 0.61 INFO @ Wed, 28 Jun 2017 03:35:30: #1 finished! INFO @ Wed, 28 Jun 2017 03:35:30: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 03:35:30: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 03:35:31: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 03:35:31: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 03:35:31: Process for pairing-model is terminated! cat: SRX2831025.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 0 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX2831025.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2831025.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX2831025.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling