Job ID = 9162119 sra ファイルのダウンロード中... Completed: 2881619K bytes transferred in 25 seconds (933080K bits/sec), in 1 file, 2 directories. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Written 48723216 spots for /home/okishinya/chipatlas/results/sacCer3/SRX1631865/SRR3225812.sra Written 48723216 spots total rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:43:22 48723216 reads; of these: 48723216 (100.00%) were paired; of these: 3018261 (6.19%) aligned concordantly 0 times 40016480 (82.13%) aligned concordantly exactly 1 time 5688475 (11.68%) aligned concordantly >1 times ---- 3018261 pairs aligned concordantly 0 times; of these: 1116278 (36.98%) aligned discordantly 1 time ---- 1901983 pairs aligned 0 times concordantly or discordantly; of these: 3803966 mates make up the pairs; of these: 3034055 (79.76%) aligned 0 times 327766 (8.62%) aligned exactly 1 time 442145 (11.62%) aligned >1 times 96.89% overall alignment rate Time searching: 00:43:22 Overall time: 00:43:22 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 2192065 / 46659552 = 0.0470 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Wed, 28 Jun 2017 07:11:38: # Command line: callpeak -t SRX1631865.bam -f BAM -g 12100000 -n SRX1631865.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX1631865.20 # format = BAM # ChIP-seq file = ['SRX1631865.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 07:11:38: #1 read tag files... INFO @ Wed, 28 Jun 2017 07:11:38: # Command line: callpeak -t SRX1631865.bam -f BAM -g 12100000 -n SRX1631865.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX1631865.05 # format = BAM # ChIP-seq file = ['SRX1631865.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 07:11:38: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 07:11:38: #1 read tag files... INFO @ Wed, 28 Jun 2017 07:11:38: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 07:11:38: # Command line: callpeak -t SRX1631865.bam -f BAM -g 12100000 -n SRX1631865.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX1631865.10 # format = BAM # ChIP-seq file = ['SRX1631865.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 07:11:38: #1 read tag files... INFO @ Wed, 28 Jun 2017 07:11:38: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 07:11:46: 1000000 INFO @ Wed, 28 Jun 2017 07:11:46: 1000000 INFO @ Wed, 28 Jun 2017 07:11:46: 1000000 INFO @ Wed, 28 Jun 2017 07:11:53: 2000000 INFO @ Wed, 28 Jun 2017 07:11:54: 2000000 INFO @ Wed, 28 Jun 2017 07:11:54: 2000000 INFO @ Wed, 28 Jun 2017 07:12:00: 3000000 INFO @ Wed, 28 Jun 2017 07:12:02: 3000000 INFO @ Wed, 28 Jun 2017 07:12:02: 3000000 INFO @ Wed, 28 Jun 2017 07:12:08: 4000000 INFO @ Wed, 28 Jun 2017 07:12:09: 4000000 INFO @ Wed, 28 Jun 2017 07:12:09: 4000000 INFO @ Wed, 28 Jun 2017 07:12:15: 5000000 INFO @ Wed, 28 Jun 2017 07:12:17: 5000000 INFO @ Wed, 28 Jun 2017 07:12:17: 5000000 INFO @ Wed, 28 Jun 2017 07:12:22: 6000000 INFO @ Wed, 28 Jun 2017 07:12:25: 6000000 INFO @ Wed, 28 Jun 2017 07:12:25: 6000000 INFO @ Wed, 28 Jun 2017 07:12:29: 7000000 INFO @ Wed, 28 Jun 2017 07:12:33: 7000000 INFO @ Wed, 28 Jun 2017 07:12:33: 7000000 INFO @ Wed, 28 Jun 2017 07:12:37: 8000000 INFO @ Wed, 28 Jun 2017 07:12:40: 8000000 INFO @ Wed, 28 Jun 2017 07:12:40: 8000000 INFO @ Wed, 28 Jun 2017 07:12:44: 9000000 INFO @ Wed, 28 Jun 2017 07:12:48: 9000000 INFO @ Wed, 28 Jun 2017 07:12:48: 9000000 INFO @ Wed, 28 Jun 2017 07:12:51: 10000000 INFO @ Wed, 28 Jun 2017 07:12:56: 10000000 INFO @ Wed, 28 Jun 2017 07:12:56: 10000000 INFO @ Wed, 28 Jun 2017 07:12:59: 11000000 INFO @ Wed, 28 Jun 2017 07:13:04: 11000000 INFO @ Wed, 28 Jun 2017 07:13:04: 11000000 INFO @ Wed, 28 Jun 2017 07:13:06: 12000000 INFO @ Wed, 28 Jun 2017 07:13:12: 12000000 INFO @ Wed, 28 Jun 2017 07:13:12: 12000000 INFO @ Wed, 28 Jun 2017 07:13:13: 13000000 INFO @ Wed, 28 Jun 2017 07:13:19: 13000000 INFO @ Wed, 28 Jun 2017 07:13:19: 13000000 INFO @ Wed, 28 Jun 2017 07:13:20: 14000000 INFO @ Wed, 28 Jun 2017 07:13:27: 14000000 INFO @ Wed, 28 Jun 2017 07:13:27: 14000000 INFO @ Wed, 28 Jun 2017 07:13:27: 15000000 INFO @ Wed, 28 Jun 2017 07:13:34: 16000000 INFO @ Wed, 28 Jun 2017 07:13:35: 15000000 INFO @ Wed, 28 Jun 2017 07:13:35: 15000000 INFO @ Wed, 28 Jun 2017 07:13:42: 17000000 INFO @ Wed, 28 Jun 2017 07:13:43: 16000000 INFO @ Wed, 28 Jun 2017 07:13:43: 16000000 INFO @ Wed, 28 Jun 2017 07:13:49: 18000000 INFO @ Wed, 28 Jun 2017 07:13:51: 17000000 INFO @ Wed, 28 Jun 2017 07:13:51: 17000000 INFO @ Wed, 28 Jun 2017 07:13:56: 19000000 INFO @ Wed, 28 Jun 2017 07:13:59: 18000000 INFO @ Wed, 28 Jun 2017 07:13:59: 18000000 INFO @ Wed, 28 Jun 2017 07:14:03: 20000000 INFO @ Wed, 28 Jun 2017 07:14:06: 19000000 INFO @ Wed, 28 Jun 2017 07:14:06: 19000000 INFO @ Wed, 28 Jun 2017 07:14:11: 21000000 INFO @ Wed, 28 Jun 2017 07:14:14: 20000000 INFO @ Wed, 28 Jun 2017 07:14:14: 20000000 INFO @ Wed, 28 Jun 2017 07:14:18: 22000000 INFO @ Wed, 28 Jun 2017 07:14:22: 21000000 INFO @ Wed, 28 Jun 2017 07:14:22: 21000000 INFO @ Wed, 28 Jun 2017 07:14:25: 23000000 INFO @ Wed, 28 Jun 2017 07:14:29: 22000000 INFO @ Wed, 28 Jun 2017 07:14:29: 22000000 INFO @ Wed, 28 Jun 2017 07:14:33: 24000000 INFO @ Wed, 28 Jun 2017 07:14:37: 23000000 INFO @ Wed, 28 Jun 2017 07:14:37: 23000000 INFO @ Wed, 28 Jun 2017 07:14:40: 25000000 INFO @ Wed, 28 Jun 2017 07:14:45: 24000000 INFO @ Wed, 28 Jun 2017 07:14:45: 24000000 INFO @ Wed, 28 Jun 2017 07:14:47: 26000000 INFO @ Wed, 28 Jun 2017 07:14:52: 25000000 INFO @ Wed, 28 Jun 2017 07:14:52: 25000000 INFO @ Wed, 28 Jun 2017 07:14:54: 27000000 INFO @ Wed, 28 Jun 2017 07:15:00: 26000000 INFO @ Wed, 28 Jun 2017 07:15:00: 26000000 INFO @ Wed, 28 Jun 2017 07:15:01: 28000000 INFO @ Wed, 28 Jun 2017 07:15:08: 27000000 INFO @ Wed, 28 Jun 2017 07:15:08: 27000000 INFO @ Wed, 28 Jun 2017 07:15:08: 29000000 INFO @ Wed, 28 Jun 2017 07:15:15: 30000000 INFO @ Wed, 28 Jun 2017 07:15:15: 28000000 INFO @ Wed, 28 Jun 2017 07:15:15: 28000000 INFO @ Wed, 28 Jun 2017 07:15:22: 31000000 INFO @ Wed, 28 Jun 2017 07:15:23: 29000000 INFO @ Wed, 28 Jun 2017 07:15:23: 29000000 INFO @ Wed, 28 Jun 2017 07:15:30: 32000000 INFO @ Wed, 28 Jun 2017 07:15:31: 30000000 INFO @ Wed, 28 Jun 2017 07:15:31: 30000000 INFO @ Wed, 28 Jun 2017 07:15:37: 33000000 INFO @ Wed, 28 Jun 2017 07:15:39: 31000000 INFO @ Wed, 28 Jun 2017 07:15:39: 31000000 INFO @ Wed, 28 Jun 2017 07:15:44: 34000000 INFO @ Wed, 28 Jun 2017 07:15:46: 32000000 INFO @ Wed, 28 Jun 2017 07:15:46: 32000000 INFO @ Wed, 28 Jun 2017 07:15:51: 35000000 INFO @ Wed, 28 Jun 2017 07:15:54: 33000000 INFO @ Wed, 28 Jun 2017 07:15:54: 33000000 INFO @ Wed, 28 Jun 2017 07:15:59: 36000000 INFO @ Wed, 28 Jun 2017 07:16:01: 34000000 INFO @ Wed, 28 Jun 2017 07:16:01: 34000000 INFO @ Wed, 28 Jun 2017 07:16:06: 37000000 INFO @ Wed, 28 Jun 2017 07:16:09: 35000000 INFO @ Wed, 28 Jun 2017 07:16:09: 35000000 INFO @ Wed, 28 Jun 2017 07:16:13: 38000000 INFO @ Wed, 28 Jun 2017 07:16:17: 36000000 INFO @ Wed, 28 Jun 2017 07:16:17: 36000000 INFO @ Wed, 28 Jun 2017 07:16:21: 39000000 INFO @ Wed, 28 Jun 2017 07:16:26: 37000000 INFO @ Wed, 28 Jun 2017 07:16:26: 37000000 INFO @ Wed, 28 Jun 2017 07:16:29: 40000000 INFO @ Wed, 28 Jun 2017 07:16:36: 38000000 INFO @ Wed, 28 Jun 2017 07:16:36: 38000000 INFO @ Wed, 28 Jun 2017 07:16:37: 41000000 INFO @ Wed, 28 Jun 2017 07:16:45: 39000000 INFO @ Wed, 28 Jun 2017 07:16:45: 39000000 INFO @ Wed, 28 Jun 2017 07:16:46: 42000000 INFO @ Wed, 28 Jun 2017 07:16:54: 43000000 INFO @ Wed, 28 Jun 2017 07:16:54: 40000000 INFO @ Wed, 28 Jun 2017 07:16:54: 40000000 INFO @ Wed, 28 Jun 2017 07:17:02: 44000000 INFO @ Wed, 28 Jun 2017 07:17:04: 41000000 INFO @ Wed, 28 Jun 2017 07:17:04: 41000000 INFO @ Wed, 28 Jun 2017 07:17:10: 45000000 INFO @ Wed, 28 Jun 2017 07:17:13: 42000000 INFO @ Wed, 28 Jun 2017 07:17:13: 42000000 INFO @ Wed, 28 Jun 2017 07:17:18: 46000000 INFO @ Wed, 28 Jun 2017 07:17:23: 43000000 INFO @ Wed, 28 Jun 2017 07:17:23: 43000000 INFO @ Wed, 28 Jun 2017 07:17:27: 47000000 INFO @ Wed, 28 Jun 2017 07:17:32: 44000000 INFO @ Wed, 28 Jun 2017 07:17:32: 44000000 INFO @ Wed, 28 Jun 2017 07:17:35: 48000000 INFO @ Wed, 28 Jun 2017 07:17:42: 45000000 INFO @ Wed, 28 Jun 2017 07:17:42: 45000000 INFO @ Wed, 28 Jun 2017 07:17:43: 49000000 INFO @ Wed, 28 Jun 2017 07:17:51: 46000000 INFO @ Wed, 28 Jun 2017 07:17:51: 46000000 INFO @ Wed, 28 Jun 2017 07:17:51: 50000000 INFO @ Wed, 28 Jun 2017 07:17:59: 51000000 INFO @ Wed, 28 Jun 2017 07:18:00: 47000000 INFO @ Wed, 28 Jun 2017 07:18:00: 47000000 INFO @ Wed, 28 Jun 2017 07:18:07: 52000000 INFO @ Wed, 28 Jun 2017 07:18:10: 48000000 INFO @ Wed, 28 Jun 2017 07:18:10: 48000000 INFO @ Wed, 28 Jun 2017 07:18:16: 53000000 INFO @ Wed, 28 Jun 2017 07:18:19: 49000000 INFO @ Wed, 28 Jun 2017 07:18:19: 49000000 INFO @ Wed, 28 Jun 2017 07:18:24: 54000000 INFO @ Wed, 28 Jun 2017 07:18:28: 50000000 INFO @ Wed, 28 Jun 2017 07:18:28: 50000000 INFO @ Wed, 28 Jun 2017 07:18:32: 55000000 INFO @ Wed, 28 Jun 2017 07:18:38: 51000000 INFO @ Wed, 28 Jun 2017 07:18:38: 51000000 INFO @ Wed, 28 Jun 2017 07:18:40: 56000000 INFO @ Wed, 28 Jun 2017 07:18:47: 52000000 INFO @ Wed, 28 Jun 2017 07:18:47: 52000000 INFO @ Wed, 28 Jun 2017 07:18:48: 57000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 28 Jun 2017 07:18:56: 53000000 INFO @ Wed, 28 Jun 2017 07:18:56: 53000000 INFO @ Wed, 28 Jun 2017 07:18:57: 58000000 INFO @ Wed, 28 Jun 2017 07:19:05: 59000000 INFO @ Wed, 28 Jun 2017 07:19:06: 54000000 INFO @ Wed, 28 Jun 2017 07:19:06: 54000000 INFO @ Wed, 28 Jun 2017 07:19:13: 60000000 BigWig に変換しました。 INFO @ Wed, 28 Jun 2017 07:19:15: 55000000 INFO @ Wed, 28 Jun 2017 07:19:15: 55000000 INFO @ Wed, 28 Jun 2017 07:19:21: 61000000 INFO @ Wed, 28 Jun 2017 07:19:25: 56000000 INFO @ Wed, 28 Jun 2017 07:19:25: 56000000 INFO @ Wed, 28 Jun 2017 07:19:29: 62000000 INFO @ Wed, 28 Jun 2017 07:19:35: 57000000 INFO @ Wed, 28 Jun 2017 07:19:35: 57000000 INFO @ Wed, 28 Jun 2017 07:19:38: 63000000 INFO @ Wed, 28 Jun 2017 07:19:44: 58000000 INFO @ Wed, 28 Jun 2017 07:19:44: 58000000 INFO @ Wed, 28 Jun 2017 07:19:46: 64000000 INFO @ Wed, 28 Jun 2017 07:19:54: 59000000 INFO @ Wed, 28 Jun 2017 07:19:54: 59000000 INFO @ Wed, 28 Jun 2017 07:19:54: 65000000 INFO @ Wed, 28 Jun 2017 07:20:02: 66000000 INFO @ Wed, 28 Jun 2017 07:20:04: 60000000 INFO @ Wed, 28 Jun 2017 07:20:04: 60000000 INFO @ Wed, 28 Jun 2017 07:20:10: 67000000 INFO @ Wed, 28 Jun 2017 07:20:13: 61000000 INFO @ Wed, 28 Jun 2017 07:20:13: 61000000 INFO @ Wed, 28 Jun 2017 07:20:19: 68000000 INFO @ Wed, 28 Jun 2017 07:20:23: 62000000 INFO @ Wed, 28 Jun 2017 07:20:23: 62000000 INFO @ Wed, 28 Jun 2017 07:20:27: 69000000 INFO @ Wed, 28 Jun 2017 07:20:32: 63000000 INFO @ Wed, 28 Jun 2017 07:20:32: 63000000 INFO @ Wed, 28 Jun 2017 07:20:35: 70000000 INFO @ Wed, 28 Jun 2017 07:20:42: 64000000 INFO @ Wed, 28 Jun 2017 07:20:42: 64000000 INFO @ Wed, 28 Jun 2017 07:20:43: 71000000 INFO @ Wed, 28 Jun 2017 07:20:51: 72000000 INFO @ Wed, 28 Jun 2017 07:20:52: 65000000 INFO @ Wed, 28 Jun 2017 07:20:52: 65000000 INFO @ Wed, 28 Jun 2017 07:21:00: 73000000 INFO @ Wed, 28 Jun 2017 07:21:01: 66000000 INFO @ Wed, 28 Jun 2017 07:21:01: 66000000 INFO @ Wed, 28 Jun 2017 07:21:08: 74000000 INFO @ Wed, 28 Jun 2017 07:21:10: 67000000 INFO @ Wed, 28 Jun 2017 07:21:10: 67000000 INFO @ Wed, 28 Jun 2017 07:21:17: 75000000 INFO @ Wed, 28 Jun 2017 07:21:20: 68000000 INFO @ Wed, 28 Jun 2017 07:21:20: 68000000 INFO @ Wed, 28 Jun 2017 07:21:26: 76000000 INFO @ Wed, 28 Jun 2017 07:21:29: 69000000 INFO @ Wed, 28 Jun 2017 07:21:29: 69000000 INFO @ Wed, 28 Jun 2017 07:21:34: 77000000 INFO @ Wed, 28 Jun 2017 07:21:39: 70000000 INFO @ Wed, 28 Jun 2017 07:21:39: 70000000 INFO @ Wed, 28 Jun 2017 07:21:43: 78000000 INFO @ Wed, 28 Jun 2017 07:21:48: 71000000 INFO @ Wed, 28 Jun 2017 07:21:48: 71000000 INFO @ Wed, 28 Jun 2017 07:21:51: 79000000 INFO @ Wed, 28 Jun 2017 07:21:58: 72000000 INFO @ Wed, 28 Jun 2017 07:21:58: 72000000 INFO @ Wed, 28 Jun 2017 07:22:00: 80000000 INFO @ Wed, 28 Jun 2017 07:22:07: 73000000 INFO @ Wed, 28 Jun 2017 07:22:07: 73000000 INFO @ Wed, 28 Jun 2017 07:22:08: 81000000 INFO @ Wed, 28 Jun 2017 07:22:16: 74000000 INFO @ Wed, 28 Jun 2017 07:22:17: 74000000 INFO @ Wed, 28 Jun 2017 07:22:17: 82000000 INFO @ Wed, 28 Jun 2017 07:22:25: 83000000 INFO @ Wed, 28 Jun 2017 07:22:26: 75000000 INFO @ Wed, 28 Jun 2017 07:22:26: 75000000 INFO @ Wed, 28 Jun 2017 07:22:34: 84000000 INFO @ Wed, 28 Jun 2017 07:22:35: 76000000 INFO @ Wed, 28 Jun 2017 07:22:35: 76000000 INFO @ Wed, 28 Jun 2017 07:22:42: 85000000 INFO @ Wed, 28 Jun 2017 07:22:45: 77000000 INFO @ Wed, 28 Jun 2017 07:22:45: 77000000 INFO @ Wed, 28 Jun 2017 07:22:51: 86000000 INFO @ Wed, 28 Jun 2017 07:22:54: 78000000 INFO @ Wed, 28 Jun 2017 07:22:54: 78000000 INFO @ Wed, 28 Jun 2017 07:23:00: 87000000 INFO @ Wed, 28 Jun 2017 07:23:03: 79000000 INFO @ Wed, 28 Jun 2017 07:23:03: 79000000 INFO @ Wed, 28 Jun 2017 07:23:08: 88000000 INFO @ Wed, 28 Jun 2017 07:23:13: 80000000 INFO @ Wed, 28 Jun 2017 07:23:13: 80000000 INFO @ Wed, 28 Jun 2017 07:23:17: 89000000 INFO @ Wed, 28 Jun 2017 07:23:22: 81000000 INFO @ Wed, 28 Jun 2017 07:23:22: 81000000 INFO @ Wed, 28 Jun 2017 07:23:25: 90000000 INFO @ Wed, 28 Jun 2017 07:23:26: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:23:26: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:23:26: #1 total tags in treatment: 43527733 INFO @ Wed, 28 Jun 2017 07:23:26: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:23:26: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:23:27: #1 tags after filtering in treatment: 18386926 INFO @ Wed, 28 Jun 2017 07:23:27: #1 Redundant rate of treatment: 0.58 INFO @ Wed, 28 Jun 2017 07:23:27: #1 finished! INFO @ Wed, 28 Jun 2017 07:23:27: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:23:27: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:23:28: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:23:28: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:23:28: Process for pairing-model is terminated! cat: SRX1631865.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631865.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631865.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631865.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 07:23:32: 82000000 INFO @ Wed, 28 Jun 2017 07:23:32: 82000000 INFO @ Wed, 28 Jun 2017 07:23:41: 83000000 INFO @ Wed, 28 Jun 2017 07:23:41: 83000000 INFO @ Wed, 28 Jun 2017 07:23:51: 84000000 INFO @ Wed, 28 Jun 2017 07:23:51: 84000000 INFO @ Wed, 28 Jun 2017 07:24:00: 85000000 INFO @ Wed, 28 Jun 2017 07:24:00: 85000000 INFO @ Wed, 28 Jun 2017 07:24:09: 86000000 INFO @ Wed, 28 Jun 2017 07:24:10: 86000000 INFO @ Wed, 28 Jun 2017 07:24:19: 87000000 INFO @ Wed, 28 Jun 2017 07:24:19: 87000000 INFO @ Wed, 28 Jun 2017 07:24:28: 88000000 INFO @ Wed, 28 Jun 2017 07:24:28: 88000000 INFO @ Wed, 28 Jun 2017 07:24:38: 89000000 INFO @ Wed, 28 Jun 2017 07:24:38: 89000000 INFO @ Wed, 28 Jun 2017 07:24:47: 90000000 INFO @ Wed, 28 Jun 2017 07:24:47: 90000000 INFO @ Wed, 28 Jun 2017 07:24:48: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:24:48: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:24:48: #1 total tags in treatment: 43527733 INFO @ Wed, 28 Jun 2017 07:24:48: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:24:48: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:24:48: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:24:48: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:24:48: #1 total tags in treatment: 43527733 INFO @ Wed, 28 Jun 2017 07:24:48: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:24:48: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:24:49: #1 tags after filtering in treatment: 18386926 INFO @ Wed, 28 Jun 2017 07:24:49: #1 Redundant rate of treatment: 0.58 INFO @ Wed, 28 Jun 2017 07:24:49: #1 finished! INFO @ Wed, 28 Jun 2017 07:24:49: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:24:49: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:24:49: #1 tags after filtering in treatment: 18386926 INFO @ Wed, 28 Jun 2017 07:24:49: #1 Redundant rate of treatment: 0.58 INFO @ Wed, 28 Jun 2017 07:24:49: #1 finished! INFO @ Wed, 28 Jun 2017 07:24:49: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:24:49: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:24:50: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:24:50: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:24:50: Process for pairing-model is terminated! cat: SRX1631865.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631865.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631865.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631865.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 07:24:50: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:24:50: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:24:50: Process for pairing-model is terminated! cat: SRX1631865.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631865.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631865.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631865.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling