Job ID = 9162118 sra ファイルのダウンロード中... Completed: 2934091K bytes transferred in 25 seconds (936127K bits/sec), in 1 file, 2 directories. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Written 49150327 spots for /home/okishinya/chipatlas/results/sacCer3/SRX1631864/SRR3225811.sra Written 49150327 spots total rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:42:44 49150327 reads; of these: 49150327 (100.00%) were paired; of these: 2800395 (5.70%) aligned concordantly 0 times 39496244 (80.36%) aligned concordantly exactly 1 time 6853688 (13.94%) aligned concordantly >1 times ---- 2800395 pairs aligned concordantly 0 times; of these: 912107 (32.57%) aligned discordantly 1 time ---- 1888288 pairs aligned 0 times concordantly or discordantly; of these: 3776576 mates make up the pairs; of these: 2998638 (79.40%) aligned 0 times 318723 (8.44%) aligned exactly 1 time 459215 (12.16%) aligned >1 times 96.95% overall alignment rate Time searching: 00:42:44 Overall time: 00:42:44 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 2454787 / 47043409 = 0.0522 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Wed, 28 Jun 2017 07:11:05: # Command line: callpeak -t SRX1631864.bam -f BAM -g 12100000 -n SRX1631864.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX1631864.10 # format = BAM # ChIP-seq file = ['SRX1631864.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 07:11:05: #1 read tag files... INFO @ Wed, 28 Jun 2017 07:11:05: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 07:11:05: # Command line: callpeak -t SRX1631864.bam -f BAM -g 12100000 -n SRX1631864.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX1631864.20 # format = BAM # ChIP-seq file = ['SRX1631864.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 07:11:05: #1 read tag files... INFO @ Wed, 28 Jun 2017 07:11:05: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 07:11:05: # Command line: callpeak -t SRX1631864.bam -f BAM -g 12100000 -n SRX1631864.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX1631864.05 # format = BAM # ChIP-seq file = ['SRX1631864.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 07:11:05: #1 read tag files... INFO @ Wed, 28 Jun 2017 07:11:05: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 07:11:11: 1000000 INFO @ Wed, 28 Jun 2017 07:11:11: 1000000 INFO @ Wed, 28 Jun 2017 07:11:11: 1000000 INFO @ Wed, 28 Jun 2017 07:11:17: 2000000 INFO @ Wed, 28 Jun 2017 07:11:17: 2000000 INFO @ Wed, 28 Jun 2017 07:11:18: 2000000 INFO @ Wed, 28 Jun 2017 07:11:23: 3000000 INFO @ Wed, 28 Jun 2017 07:11:23: 3000000 INFO @ Wed, 28 Jun 2017 07:11:24: 3000000 INFO @ Wed, 28 Jun 2017 07:11:29: 4000000 INFO @ Wed, 28 Jun 2017 07:11:30: 4000000 INFO @ Wed, 28 Jun 2017 07:11:30: 4000000 INFO @ Wed, 28 Jun 2017 07:11:35: 5000000 INFO @ Wed, 28 Jun 2017 07:11:35: 5000000 INFO @ Wed, 28 Jun 2017 07:11:36: 5000000 INFO @ Wed, 28 Jun 2017 07:11:41: 6000000 INFO @ Wed, 28 Jun 2017 07:11:41: 6000000 INFO @ Wed, 28 Jun 2017 07:11:42: 6000000 INFO @ Wed, 28 Jun 2017 07:11:47: 7000000 INFO @ Wed, 28 Jun 2017 07:11:47: 7000000 INFO @ Wed, 28 Jun 2017 07:11:48: 7000000 INFO @ Wed, 28 Jun 2017 07:11:53: 8000000 INFO @ Wed, 28 Jun 2017 07:11:53: 8000000 INFO @ Wed, 28 Jun 2017 07:11:54: 8000000 INFO @ Wed, 28 Jun 2017 07:11:59: 9000000 INFO @ Wed, 28 Jun 2017 07:11:59: 9000000 INFO @ Wed, 28 Jun 2017 07:12:00: 9000000 INFO @ Wed, 28 Jun 2017 07:12:05: 10000000 INFO @ Wed, 28 Jun 2017 07:12:05: 10000000 INFO @ Wed, 28 Jun 2017 07:12:06: 10000000 INFO @ Wed, 28 Jun 2017 07:12:11: 11000000 INFO @ Wed, 28 Jun 2017 07:12:11: 11000000 INFO @ Wed, 28 Jun 2017 07:12:12: 11000000 INFO @ Wed, 28 Jun 2017 07:12:16: 12000000 INFO @ Wed, 28 Jun 2017 07:12:17: 12000000 INFO @ Wed, 28 Jun 2017 07:12:18: 12000000 INFO @ Wed, 28 Jun 2017 07:12:22: 13000000 INFO @ Wed, 28 Jun 2017 07:12:23: 13000000 INFO @ Wed, 28 Jun 2017 07:12:25: 13000000 INFO @ Wed, 28 Jun 2017 07:12:28: 14000000 INFO @ Wed, 28 Jun 2017 07:12:29: 14000000 INFO @ Wed, 28 Jun 2017 07:12:31: 14000000 INFO @ Wed, 28 Jun 2017 07:12:33: 15000000 INFO @ Wed, 28 Jun 2017 07:12:35: 15000000 INFO @ Wed, 28 Jun 2017 07:12:37: 15000000 INFO @ Wed, 28 Jun 2017 07:12:39: 16000000 INFO @ Wed, 28 Jun 2017 07:12:41: 16000000 INFO @ Wed, 28 Jun 2017 07:12:43: 16000000 INFO @ Wed, 28 Jun 2017 07:12:45: 17000000 INFO @ Wed, 28 Jun 2017 07:12:47: 17000000 INFO @ Wed, 28 Jun 2017 07:12:49: 17000000 INFO @ Wed, 28 Jun 2017 07:12:50: 18000000 INFO @ Wed, 28 Jun 2017 07:12:52: 18000000 INFO @ Wed, 28 Jun 2017 07:12:55: 18000000 INFO @ Wed, 28 Jun 2017 07:12:56: 19000000 INFO @ Wed, 28 Jun 2017 07:12:58: 19000000 INFO @ Wed, 28 Jun 2017 07:13:01: 19000000 INFO @ Wed, 28 Jun 2017 07:13:02: 20000000 INFO @ Wed, 28 Jun 2017 07:13:04: 20000000 INFO @ Wed, 28 Jun 2017 07:13:07: 20000000 INFO @ Wed, 28 Jun 2017 07:13:07: 21000000 INFO @ Wed, 28 Jun 2017 07:13:10: 21000000 INFO @ Wed, 28 Jun 2017 07:13:13: 22000000 INFO @ Wed, 28 Jun 2017 07:13:13: 21000000 INFO @ Wed, 28 Jun 2017 07:13:16: 22000000 INFO @ Wed, 28 Jun 2017 07:13:19: 23000000 INFO @ Wed, 28 Jun 2017 07:13:19: 22000000 INFO @ Wed, 28 Jun 2017 07:13:22: 23000000 INFO @ Wed, 28 Jun 2017 07:13:24: 24000000 INFO @ Wed, 28 Jun 2017 07:13:25: 23000000 INFO @ Wed, 28 Jun 2017 07:13:28: 24000000 INFO @ Wed, 28 Jun 2017 07:13:30: 25000000 INFO @ Wed, 28 Jun 2017 07:13:31: 24000000 INFO @ Wed, 28 Jun 2017 07:13:34: 25000000 INFO @ Wed, 28 Jun 2017 07:13:36: 26000000 INFO @ Wed, 28 Jun 2017 07:13:38: 25000000 INFO @ Wed, 28 Jun 2017 07:13:40: 26000000 INFO @ Wed, 28 Jun 2017 07:13:41: 27000000 INFO @ Wed, 28 Jun 2017 07:13:44: 26000000 INFO @ Wed, 28 Jun 2017 07:13:47: 27000000 INFO @ Wed, 28 Jun 2017 07:13:48: 28000000 INFO @ Wed, 28 Jun 2017 07:13:52: 27000000 INFO @ Wed, 28 Jun 2017 07:13:55: 28000000 INFO @ Wed, 28 Jun 2017 07:13:55: 29000000 INFO @ Wed, 28 Jun 2017 07:13:59: 28000000 INFO @ Wed, 28 Jun 2017 07:14:02: 29000000 INFO @ Wed, 28 Jun 2017 07:14:02: 30000000 INFO @ Wed, 28 Jun 2017 07:14:06: 29000000 INFO @ Wed, 28 Jun 2017 07:14:08: 30000000 INFO @ Wed, 28 Jun 2017 07:14:10: 31000000 INFO @ Wed, 28 Jun 2017 07:14:13: 30000000 INFO @ Wed, 28 Jun 2017 07:14:15: 31000000 INFO @ Wed, 28 Jun 2017 07:14:17: 32000000 INFO @ Wed, 28 Jun 2017 07:14:20: 31000000 INFO @ Wed, 28 Jun 2017 07:14:22: 32000000 INFO @ Wed, 28 Jun 2017 07:14:24: 33000000 INFO @ Wed, 28 Jun 2017 07:14:27: 32000000 INFO @ Wed, 28 Jun 2017 07:14:29: 33000000 INFO @ Wed, 28 Jun 2017 07:14:32: 34000000 INFO @ Wed, 28 Jun 2017 07:14:34: 33000000 INFO @ Wed, 28 Jun 2017 07:14:36: 34000000 INFO @ Wed, 28 Jun 2017 07:14:39: 35000000 INFO @ Wed, 28 Jun 2017 07:14:41: 34000000 INFO @ Wed, 28 Jun 2017 07:14:43: 35000000 INFO @ Wed, 28 Jun 2017 07:14:47: 36000000 INFO @ Wed, 28 Jun 2017 07:14:49: 35000000 INFO @ Wed, 28 Jun 2017 07:14:50: 36000000 INFO @ Wed, 28 Jun 2017 07:14:54: 37000000 INFO @ Wed, 28 Jun 2017 07:14:56: 36000000 INFO @ Wed, 28 Jun 2017 07:14:57: 37000000 INFO @ Wed, 28 Jun 2017 07:15:01: 38000000 INFO @ Wed, 28 Jun 2017 07:15:03: 37000000 INFO @ Wed, 28 Jun 2017 07:15:04: 38000000 INFO @ Wed, 28 Jun 2017 07:15:08: 39000000 INFO @ Wed, 28 Jun 2017 07:15:10: 38000000 INFO @ Wed, 28 Jun 2017 07:15:11: 39000000 INFO @ Wed, 28 Jun 2017 07:15:14: 40000000 INFO @ Wed, 28 Jun 2017 07:15:16: 39000000 INFO @ Wed, 28 Jun 2017 07:15:17: 40000000 INFO @ Wed, 28 Jun 2017 07:15:19: 41000000 INFO @ Wed, 28 Jun 2017 07:15:22: 40000000 INFO @ Wed, 28 Jun 2017 07:15:23: 41000000 INFO @ Wed, 28 Jun 2017 07:15:25: 42000000 INFO @ Wed, 28 Jun 2017 07:15:28: 41000000 INFO @ Wed, 28 Jun 2017 07:15:29: 42000000 INFO @ Wed, 28 Jun 2017 07:15:30: 43000000 INFO @ Wed, 28 Jun 2017 07:15:34: 42000000 INFO @ Wed, 28 Jun 2017 07:15:35: 43000000 INFO @ Wed, 28 Jun 2017 07:15:36: 44000000 INFO @ Wed, 28 Jun 2017 07:15:40: 43000000 INFO @ Wed, 28 Jun 2017 07:15:41: 44000000 INFO @ Wed, 28 Jun 2017 07:15:42: 45000000 INFO @ Wed, 28 Jun 2017 07:15:46: 44000000 INFO @ Wed, 28 Jun 2017 07:15:46: 45000000 INFO @ Wed, 28 Jun 2017 07:15:47: 46000000 INFO @ Wed, 28 Jun 2017 07:15:52: 45000000 INFO @ Wed, 28 Jun 2017 07:15:52: 46000000 INFO @ Wed, 28 Jun 2017 07:15:53: 47000000 INFO @ Wed, 28 Jun 2017 07:15:58: 46000000 INFO @ Wed, 28 Jun 2017 07:15:58: 47000000 INFO @ Wed, 28 Jun 2017 07:15:59: 48000000 INFO @ Wed, 28 Jun 2017 07:16:04: 47000000 INFO @ Wed, 28 Jun 2017 07:16:04: 48000000 INFO @ Wed, 28 Jun 2017 07:16:04: 49000000 INFO @ Wed, 28 Jun 2017 07:16:10: 50000000 INFO @ Wed, 28 Jun 2017 07:16:10: 49000000 INFO @ Wed, 28 Jun 2017 07:16:10: 48000000 INFO @ Wed, 28 Jun 2017 07:16:16: 51000000 INFO @ Wed, 28 Jun 2017 07:16:16: 50000000 INFO @ Wed, 28 Jun 2017 07:16:16: 49000000 INFO @ Wed, 28 Jun 2017 07:16:21: 52000000 INFO @ Wed, 28 Jun 2017 07:16:22: 51000000 INFO @ Wed, 28 Jun 2017 07:16:22: 50000000 INFO @ Wed, 28 Jun 2017 07:16:27: 53000000 INFO @ Wed, 28 Jun 2017 07:16:28: 52000000 INFO @ Wed, 28 Jun 2017 07:16:29: 51000000 INFO @ Wed, 28 Jun 2017 07:16:33: 54000000 INFO @ Wed, 28 Jun 2017 07:16:34: 53000000 INFO @ Wed, 28 Jun 2017 07:16:35: 52000000 INFO @ Wed, 28 Jun 2017 07:16:38: 55000000 INFO @ Wed, 28 Jun 2017 07:16:40: 54000000 INFO @ Wed, 28 Jun 2017 07:16:41: 53000000 INFO @ Wed, 28 Jun 2017 07:16:44: 56000000 INFO @ Wed, 28 Jun 2017 07:16:46: 55000000 INFO @ Wed, 28 Jun 2017 07:16:47: 54000000 INFO @ Wed, 28 Jun 2017 07:16:49: 57000000 INFO @ Wed, 28 Jun 2017 07:16:52: 56000000 INFO @ Wed, 28 Jun 2017 07:16:53: 55000000 INFO @ Wed, 28 Jun 2017 07:16:55: 58000000 INFO @ Wed, 28 Jun 2017 07:16:58: 57000000 INFO @ Wed, 28 Jun 2017 07:16:59: 56000000 INFO @ Wed, 28 Jun 2017 07:17:01: 59000000 INFO @ Wed, 28 Jun 2017 07:17:04: 58000000 INFO @ Wed, 28 Jun 2017 07:17:05: 57000000 INFO @ Wed, 28 Jun 2017 07:17:06: 60000000 INFO @ Wed, 28 Jun 2017 07:17:10: 59000000 INFO @ Wed, 28 Jun 2017 07:17:12: 58000000 INFO @ Wed, 28 Jun 2017 07:17:12: 61000000 INFO @ Wed, 28 Jun 2017 07:17:16: 60000000 INFO @ Wed, 28 Jun 2017 07:17:18: 62000000 INFO @ Wed, 28 Jun 2017 07:17:18: 59000000 INFO @ Wed, 28 Jun 2017 07:17:22: 61000000 INFO @ Wed, 28 Jun 2017 07:17:23: 63000000 INFO @ Wed, 28 Jun 2017 07:17:24: 60000000 INFO @ Wed, 28 Jun 2017 07:17:28: 62000000 INFO @ Wed, 28 Jun 2017 07:17:29: 64000000 INFO @ Wed, 28 Jun 2017 07:17:30: 61000000 INFO @ Wed, 28 Jun 2017 07:17:34: 63000000 INFO @ Wed, 28 Jun 2017 07:17:35: 65000000 INFO @ Wed, 28 Jun 2017 07:17:36: 62000000 INFO @ Wed, 28 Jun 2017 07:17:40: 64000000 INFO @ Wed, 28 Jun 2017 07:17:40: 66000000 INFO @ Wed, 28 Jun 2017 07:17:42: 63000000 INFO @ Wed, 28 Jun 2017 07:17:46: 65000000 INFO @ Wed, 28 Jun 2017 07:17:46: 67000000 INFO @ Wed, 28 Jun 2017 07:17:48: 64000000 INFO @ Wed, 28 Jun 2017 07:17:52: 68000000 INFO @ Wed, 28 Jun 2017 07:17:52: 66000000 INFO @ Wed, 28 Jun 2017 07:17:54: 65000000 INFO @ Wed, 28 Jun 2017 07:17:57: 69000000 INFO @ Wed, 28 Jun 2017 07:17:58: 67000000 INFO @ Wed, 28 Jun 2017 07:18:00: 66000000 INFO @ Wed, 28 Jun 2017 07:18:03: 70000000 INFO @ Wed, 28 Jun 2017 07:18:04: 68000000 INFO @ Wed, 28 Jun 2017 07:18:07: 67000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 28 Jun 2017 07:18:09: 71000000 INFO @ Wed, 28 Jun 2017 07:18:10: 69000000 INFO @ Wed, 28 Jun 2017 07:18:13: 68000000 INFO @ Wed, 28 Jun 2017 07:18:15: 72000000 INFO @ Wed, 28 Jun 2017 07:18:16: 70000000 INFO @ Wed, 28 Jun 2017 07:18:19: 69000000 INFO @ Wed, 28 Jun 2017 07:18:20: 73000000 INFO @ Wed, 28 Jun 2017 07:18:22: 71000000 INFO @ Wed, 28 Jun 2017 07:18:25: 70000000 INFO @ Wed, 28 Jun 2017 07:18:26: 74000000 INFO @ Wed, 28 Jun 2017 07:18:28: 72000000 BigWig に変換しました。 INFO @ Wed, 28 Jun 2017 07:18:31: 71000000 INFO @ Wed, 28 Jun 2017 07:18:32: 75000000 INFO @ Wed, 28 Jun 2017 07:18:34: 73000000 INFO @ Wed, 28 Jun 2017 07:18:37: 72000000 INFO @ Wed, 28 Jun 2017 07:18:37: 76000000 INFO @ Wed, 28 Jun 2017 07:18:40: 74000000 INFO @ Wed, 28 Jun 2017 07:18:43: 77000000 INFO @ Wed, 28 Jun 2017 07:18:43: 73000000 INFO @ Wed, 28 Jun 2017 07:18:46: 75000000 INFO @ Wed, 28 Jun 2017 07:18:49: 78000000 INFO @ Wed, 28 Jun 2017 07:18:49: 74000000 INFO @ Wed, 28 Jun 2017 07:18:52: 76000000 INFO @ Wed, 28 Jun 2017 07:18:55: 79000000 INFO @ Wed, 28 Jun 2017 07:18:56: 75000000 INFO @ Wed, 28 Jun 2017 07:18:58: 77000000 INFO @ Wed, 28 Jun 2017 07:19:01: 80000000 INFO @ Wed, 28 Jun 2017 07:19:02: 76000000 INFO @ Wed, 28 Jun 2017 07:19:05: 78000000 INFO @ Wed, 28 Jun 2017 07:19:07: 81000000 INFO @ Wed, 28 Jun 2017 07:19:09: 77000000 INFO @ Wed, 28 Jun 2017 07:19:11: 79000000 INFO @ Wed, 28 Jun 2017 07:19:13: 82000000 INFO @ Wed, 28 Jun 2017 07:19:16: 78000000 INFO @ Wed, 28 Jun 2017 07:19:18: 80000000 INFO @ Wed, 28 Jun 2017 07:19:19: 83000000 INFO @ Wed, 28 Jun 2017 07:19:23: 79000000 INFO @ Wed, 28 Jun 2017 07:19:25: 81000000 INFO @ Wed, 28 Jun 2017 07:19:25: 84000000 INFO @ Wed, 28 Jun 2017 07:19:30: 80000000 INFO @ Wed, 28 Jun 2017 07:19:31: 85000000 INFO @ Wed, 28 Jun 2017 07:19:31: 82000000 INFO @ Wed, 28 Jun 2017 07:19:36: 81000000 INFO @ Wed, 28 Jun 2017 07:19:37: 86000000 INFO @ Wed, 28 Jun 2017 07:19:38: 83000000 INFO @ Wed, 28 Jun 2017 07:19:43: 87000000 INFO @ Wed, 28 Jun 2017 07:19:43: 82000000 INFO @ Wed, 28 Jun 2017 07:19:45: 84000000 INFO @ Wed, 28 Jun 2017 07:19:49: 88000000 INFO @ Wed, 28 Jun 2017 07:19:50: 83000000 INFO @ Wed, 28 Jun 2017 07:19:51: 85000000 INFO @ Wed, 28 Jun 2017 07:19:55: 89000000 INFO @ Wed, 28 Jun 2017 07:19:57: 84000000 INFO @ Wed, 28 Jun 2017 07:19:58: 86000000 INFO @ Wed, 28 Jun 2017 07:20:01: 90000000 INFO @ Wed, 28 Jun 2017 07:20:03: 85000000 INFO @ Wed, 28 Jun 2017 07:20:04: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:20:04: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:20:04: #1 total tags in treatment: 43903311 INFO @ Wed, 28 Jun 2017 07:20:04: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:20:04: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:20:04: 87000000 INFO @ Wed, 28 Jun 2017 07:20:05: #1 tags after filtering in treatment: 18246188 INFO @ Wed, 28 Jun 2017 07:20:05: #1 Redundant rate of treatment: 0.58 INFO @ Wed, 28 Jun 2017 07:20:05: #1 finished! INFO @ Wed, 28 Jun 2017 07:20:05: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:20:05: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:20:06: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:20:06: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:20:06: Process for pairing-model is terminated! cat: SRX1631864.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631864.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631864.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631864.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 07:20:10: 86000000 INFO @ Wed, 28 Jun 2017 07:20:11: 88000000 INFO @ Wed, 28 Jun 2017 07:20:17: 87000000 INFO @ Wed, 28 Jun 2017 07:20:17: 89000000 INFO @ Wed, 28 Jun 2017 07:20:23: 88000000 INFO @ Wed, 28 Jun 2017 07:20:23: 90000000 INFO @ Wed, 28 Jun 2017 07:20:27: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:20:27: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:20:27: #1 total tags in treatment: 43903311 INFO @ Wed, 28 Jun 2017 07:20:27: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:20:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:20:28: #1 tags after filtering in treatment: 18246188 INFO @ Wed, 28 Jun 2017 07:20:28: #1 Redundant rate of treatment: 0.58 INFO @ Wed, 28 Jun 2017 07:20:28: #1 finished! INFO @ Wed, 28 Jun 2017 07:20:28: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:20:28: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:20:29: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:20:29: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:20:29: Process for pairing-model is terminated! cat: SRX1631864.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631864.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631864.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631864.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 07:20:29: 89000000 INFO @ Wed, 28 Jun 2017 07:20:35: 90000000 INFO @ Wed, 28 Jun 2017 07:20:38: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:20:38: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:20:38: #1 total tags in treatment: 43903311 INFO @ Wed, 28 Jun 2017 07:20:38: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:20:38: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:20:39: #1 tags after filtering in treatment: 18246188 INFO @ Wed, 28 Jun 2017 07:20:39: #1 Redundant rate of treatment: 0.58 INFO @ Wed, 28 Jun 2017 07:20:39: #1 finished! INFO @ Wed, 28 Jun 2017 07:20:39: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:20:39: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:20:40: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:20:40: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:20:40: Process for pairing-model is terminated! cat: SRX1631864.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631864.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631864.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631864.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling