Job ID = 9162115 sra ファイルのダウンロード中... Completed: 2608696K bytes transferred in 37 seconds (573536K bits/sec), in 1 file, 2 directories. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Written 44064409 spots for /home/okishinya/chipatlas/results/sacCer3/SRX1631861/SRR3225808.sra Written 44064409 spots total rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:35:44 44064409 reads; of these: 44064409 (100.00%) were paired; of these: 2802001 (6.36%) aligned concordantly 0 times 35704383 (81.03%) aligned concordantly exactly 1 time 5558025 (12.61%) aligned concordantly >1 times ---- 2802001 pairs aligned concordantly 0 times; of these: 1068377 (38.13%) aligned discordantly 1 time ---- 1733624 pairs aligned 0 times concordantly or discordantly; of these: 3467248 mates make up the pairs; of these: 2720680 (78.47%) aligned 0 times 295591 (8.53%) aligned exactly 1 time 450977 (13.01%) aligned >1 times 96.91% overall alignment rate Time searching: 00:35:44 Overall time: 00:35:44 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 2032081 / 42175765 = 0.0482 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Wed, 28 Jun 2017 06:59:47: # Command line: callpeak -t SRX1631861.bam -f BAM -g 12100000 -n SRX1631861.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX1631861.05 # format = BAM # ChIP-seq file = ['SRX1631861.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 06:59:47: #1 read tag files... INFO @ Wed, 28 Jun 2017 06:59:47: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 06:59:47: # Command line: callpeak -t SRX1631861.bam -f BAM -g 12100000 -n SRX1631861.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX1631861.20 # format = BAM # ChIP-seq file = ['SRX1631861.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 06:59:47: #1 read tag files... INFO @ Wed, 28 Jun 2017 06:59:47: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 06:59:47: # Command line: callpeak -t SRX1631861.bam -f BAM -g 12100000 -n SRX1631861.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX1631861.10 # format = BAM # ChIP-seq file = ['SRX1631861.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 06:59:47: #1 read tag files... INFO @ Wed, 28 Jun 2017 06:59:47: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 06:59:53: 1000000 INFO @ Wed, 28 Jun 2017 06:59:54: 1000000 INFO @ Wed, 28 Jun 2017 06:59:54: 1000000 INFO @ Wed, 28 Jun 2017 07:00:00: 2000000 INFO @ Wed, 28 Jun 2017 07:00:01: 2000000 INFO @ Wed, 28 Jun 2017 07:00:01: 2000000 INFO @ Wed, 28 Jun 2017 07:00:07: 3000000 INFO @ Wed, 28 Jun 2017 07:00:07: 3000000 INFO @ Wed, 28 Jun 2017 07:00:09: 3000000 INFO @ Wed, 28 Jun 2017 07:00:14: 4000000 INFO @ Wed, 28 Jun 2017 07:00:14: 4000000 INFO @ Wed, 28 Jun 2017 07:00:16: 4000000 INFO @ Wed, 28 Jun 2017 07:00:21: 5000000 INFO @ Wed, 28 Jun 2017 07:00:21: 5000000 INFO @ Wed, 28 Jun 2017 07:00:23: 5000000 INFO @ Wed, 28 Jun 2017 07:00:29: 6000000 INFO @ Wed, 28 Jun 2017 07:00:29: 6000000 INFO @ Wed, 28 Jun 2017 07:00:29: 6000000 INFO @ Wed, 28 Jun 2017 07:00:36: 7000000 INFO @ Wed, 28 Jun 2017 07:00:36: 7000000 INFO @ Wed, 28 Jun 2017 07:00:36: 7000000 INFO @ Wed, 28 Jun 2017 07:00:43: 8000000 INFO @ Wed, 28 Jun 2017 07:00:43: 8000000 INFO @ Wed, 28 Jun 2017 07:00:43: 8000000 INFO @ Wed, 28 Jun 2017 07:00:49: 9000000 INFO @ Wed, 28 Jun 2017 07:00:51: 9000000 INFO @ Wed, 28 Jun 2017 07:00:51: 9000000 INFO @ Wed, 28 Jun 2017 07:00:56: 10000000 INFO @ Wed, 28 Jun 2017 07:00:59: 10000000 INFO @ Wed, 28 Jun 2017 07:00:59: 10000000 INFO @ Wed, 28 Jun 2017 07:01:02: 11000000 INFO @ Wed, 28 Jun 2017 07:01:07: 11000000 INFO @ Wed, 28 Jun 2017 07:01:07: 11000000 INFO @ Wed, 28 Jun 2017 07:01:09: 12000000 INFO @ Wed, 28 Jun 2017 07:01:14: 12000000 INFO @ Wed, 28 Jun 2017 07:01:14: 12000000 INFO @ Wed, 28 Jun 2017 07:01:15: 13000000 INFO @ Wed, 28 Jun 2017 07:01:22: 14000000 INFO @ Wed, 28 Jun 2017 07:01:22: 13000000 INFO @ Wed, 28 Jun 2017 07:01:22: 13000000 INFO @ Wed, 28 Jun 2017 07:01:28: 15000000 INFO @ Wed, 28 Jun 2017 07:01:29: 14000000 INFO @ Wed, 28 Jun 2017 07:01:29: 14000000 INFO @ Wed, 28 Jun 2017 07:01:35: 16000000 INFO @ Wed, 28 Jun 2017 07:01:37: 15000000 INFO @ Wed, 28 Jun 2017 07:01:37: 15000000 INFO @ Wed, 28 Jun 2017 07:01:42: 17000000 INFO @ Wed, 28 Jun 2017 07:01:44: 16000000 INFO @ Wed, 28 Jun 2017 07:01:44: 16000000 INFO @ Wed, 28 Jun 2017 07:01:48: 18000000 INFO @ Wed, 28 Jun 2017 07:01:52: 17000000 INFO @ Wed, 28 Jun 2017 07:01:52: 17000000 INFO @ Wed, 28 Jun 2017 07:01:55: 19000000 INFO @ Wed, 28 Jun 2017 07:01:59: 18000000 INFO @ Wed, 28 Jun 2017 07:01:59: 18000000 INFO @ Wed, 28 Jun 2017 07:02:01: 20000000 INFO @ Wed, 28 Jun 2017 07:02:06: 19000000 INFO @ Wed, 28 Jun 2017 07:02:06: 19000000 INFO @ Wed, 28 Jun 2017 07:02:08: 21000000 INFO @ Wed, 28 Jun 2017 07:02:14: 20000000 INFO @ Wed, 28 Jun 2017 07:02:14: 20000000 INFO @ Wed, 28 Jun 2017 07:02:15: 22000000 INFO @ Wed, 28 Jun 2017 07:02:21: 21000000 INFO @ Wed, 28 Jun 2017 07:02:21: 21000000 INFO @ Wed, 28 Jun 2017 07:02:21: 23000000 INFO @ Wed, 28 Jun 2017 07:02:28: 24000000 INFO @ Wed, 28 Jun 2017 07:02:28: 22000000 INFO @ Wed, 28 Jun 2017 07:02:29: 22000000 INFO @ Wed, 28 Jun 2017 07:02:35: 25000000 INFO @ Wed, 28 Jun 2017 07:02:36: 23000000 INFO @ Wed, 28 Jun 2017 07:02:36: 23000000 INFO @ Wed, 28 Jun 2017 07:02:41: 26000000 INFO @ Wed, 28 Jun 2017 07:02:43: 24000000 INFO @ Wed, 28 Jun 2017 07:02:43: 24000000 INFO @ Wed, 28 Jun 2017 07:02:48: 27000000 INFO @ Wed, 28 Jun 2017 07:02:51: 25000000 INFO @ Wed, 28 Jun 2017 07:02:51: 25000000 INFO @ Wed, 28 Jun 2017 07:02:55: 28000000 INFO @ Wed, 28 Jun 2017 07:02:58: 26000000 INFO @ Wed, 28 Jun 2017 07:02:58: 26000000 INFO @ Wed, 28 Jun 2017 07:03:01: 29000000 INFO @ Wed, 28 Jun 2017 07:03:05: 27000000 INFO @ Wed, 28 Jun 2017 07:03:05: 27000000 INFO @ Wed, 28 Jun 2017 07:03:08: 30000000 INFO @ Wed, 28 Jun 2017 07:03:13: 28000000 INFO @ Wed, 28 Jun 2017 07:03:13: 28000000 INFO @ Wed, 28 Jun 2017 07:03:14: 31000000 INFO @ Wed, 28 Jun 2017 07:03:20: 29000000 INFO @ Wed, 28 Jun 2017 07:03:20: 29000000 INFO @ Wed, 28 Jun 2017 07:03:21: 32000000 INFO @ Wed, 28 Jun 2017 07:03:28: 30000000 INFO @ Wed, 28 Jun 2017 07:03:28: 33000000 INFO @ Wed, 28 Jun 2017 07:03:28: 30000000 INFO @ Wed, 28 Jun 2017 07:03:34: 34000000 INFO @ Wed, 28 Jun 2017 07:03:35: 31000000 INFO @ Wed, 28 Jun 2017 07:03:35: 31000000 INFO @ Wed, 28 Jun 2017 07:03:41: 35000000 INFO @ Wed, 28 Jun 2017 07:03:42: 32000000 INFO @ Wed, 28 Jun 2017 07:03:43: 32000000 INFO @ Wed, 28 Jun 2017 07:03:48: 36000000 INFO @ Wed, 28 Jun 2017 07:03:49: 33000000 INFO @ Wed, 28 Jun 2017 07:03:52: 33000000 INFO @ Wed, 28 Jun 2017 07:03:55: 37000000 INFO @ Wed, 28 Jun 2017 07:03:57: 34000000 INFO @ Wed, 28 Jun 2017 07:04:00: 34000000 INFO @ Wed, 28 Jun 2017 07:04:03: 38000000 INFO @ Wed, 28 Jun 2017 07:04:04: 35000000 INFO @ Wed, 28 Jun 2017 07:04:09: 35000000 INFO @ Wed, 28 Jun 2017 07:04:10: 39000000 INFO @ Wed, 28 Jun 2017 07:04:11: 36000000 INFO @ Wed, 28 Jun 2017 07:04:17: 40000000 INFO @ Wed, 28 Jun 2017 07:04:17: 36000000 INFO @ Wed, 28 Jun 2017 07:04:18: 37000000 INFO @ Wed, 28 Jun 2017 07:04:24: 41000000 INFO @ Wed, 28 Jun 2017 07:04:25: 38000000 INFO @ Wed, 28 Jun 2017 07:04:26: 37000000 INFO @ Wed, 28 Jun 2017 07:04:31: 42000000 INFO @ Wed, 28 Jun 2017 07:04:33: 39000000 INFO @ Wed, 28 Jun 2017 07:04:34: 38000000 INFO @ Wed, 28 Jun 2017 07:04:38: 43000000 INFO @ Wed, 28 Jun 2017 07:04:40: 40000000 INFO @ Wed, 28 Jun 2017 07:04:42: 39000000 INFO @ Wed, 28 Jun 2017 07:04:46: 44000000 INFO @ Wed, 28 Jun 2017 07:04:47: 41000000 INFO @ Wed, 28 Jun 2017 07:04:51: 40000000 INFO @ Wed, 28 Jun 2017 07:04:53: 45000000 INFO @ Wed, 28 Jun 2017 07:04:54: 42000000 INFO @ Wed, 28 Jun 2017 07:05:00: 41000000 INFO @ Wed, 28 Jun 2017 07:05:00: 46000000 INFO @ Wed, 28 Jun 2017 07:05:01: 43000000 INFO @ Wed, 28 Jun 2017 07:05:07: 47000000 INFO @ Wed, 28 Jun 2017 07:05:08: 42000000 INFO @ Wed, 28 Jun 2017 07:05:08: 44000000 INFO @ Wed, 28 Jun 2017 07:05:14: 48000000 INFO @ Wed, 28 Jun 2017 07:05:16: 45000000 INFO @ Wed, 28 Jun 2017 07:05:16: 43000000 INFO @ Wed, 28 Jun 2017 07:05:21: 49000000 INFO @ Wed, 28 Jun 2017 07:05:23: 46000000 INFO @ Wed, 28 Jun 2017 07:05:24: 44000000 INFO @ Wed, 28 Jun 2017 07:05:29: 50000000 INFO @ Wed, 28 Jun 2017 07:05:30: 47000000 INFO @ Wed, 28 Jun 2017 07:05:32: 45000000 INFO @ Wed, 28 Jun 2017 07:05:36: 51000000 INFO @ Wed, 28 Jun 2017 07:05:37: 48000000 INFO @ Wed, 28 Jun 2017 07:05:41: 46000000 INFO @ Wed, 28 Jun 2017 07:05:43: 52000000 INFO @ Wed, 28 Jun 2017 07:05:44: 49000000 INFO @ Wed, 28 Jun 2017 07:05:49: 47000000 INFO @ Wed, 28 Jun 2017 07:05:50: 53000000 INFO @ Wed, 28 Jun 2017 07:05:52: 50000000 INFO @ Wed, 28 Jun 2017 07:05:57: 48000000 INFO @ Wed, 28 Jun 2017 07:05:57: 54000000 INFO @ Wed, 28 Jun 2017 07:05:59: 51000000 INFO @ Wed, 28 Jun 2017 07:06:04: 55000000 INFO @ Wed, 28 Jun 2017 07:06:05: 49000000 INFO @ Wed, 28 Jun 2017 07:06:06: 52000000 INFO @ Wed, 28 Jun 2017 07:06:12: 56000000 INFO @ Wed, 28 Jun 2017 07:06:14: 50000000 INFO @ Wed, 28 Jun 2017 07:06:14: 53000000 INFO @ Wed, 28 Jun 2017 07:06:19: 57000000 INFO @ Wed, 28 Jun 2017 07:06:21: 54000000 INFO @ Wed, 28 Jun 2017 07:06:22: 51000000 INFO @ Wed, 28 Jun 2017 07:06:26: 58000000 INFO @ Wed, 28 Jun 2017 07:06:28: 55000000 INFO @ Wed, 28 Jun 2017 07:06:30: 52000000 INFO @ Wed, 28 Jun 2017 07:06:33: 59000000 INFO @ Wed, 28 Jun 2017 07:06:36: 56000000 INFO @ Wed, 28 Jun 2017 07:06:39: 53000000 INFO @ Wed, 28 Jun 2017 07:06:41: 60000000 INFO @ Wed, 28 Jun 2017 07:06:43: 57000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 28 Jun 2017 07:06:47: 54000000 INFO @ Wed, 28 Jun 2017 07:06:48: 61000000 INFO @ Wed, 28 Jun 2017 07:06:51: 58000000 INFO @ Wed, 28 Jun 2017 07:06:55: 62000000 INFO @ Wed, 28 Jun 2017 07:06:56: 55000000 INFO @ Wed, 28 Jun 2017 07:06:58: 59000000 INFO @ Wed, 28 Jun 2017 07:07:02: 63000000 INFO @ Wed, 28 Jun 2017 07:07:04: 56000000 INFO @ Wed, 28 Jun 2017 07:07:06: 60000000 INFO @ Wed, 28 Jun 2017 07:07:10: 64000000 BigWig に変換しました。 INFO @ Wed, 28 Jun 2017 07:07:12: 57000000 INFO @ Wed, 28 Jun 2017 07:07:13: 61000000 INFO @ Wed, 28 Jun 2017 07:07:17: 65000000 INFO @ Wed, 28 Jun 2017 07:07:21: 62000000 INFO @ Wed, 28 Jun 2017 07:07:21: 58000000 INFO @ Wed, 28 Jun 2017 07:07:24: 66000000 INFO @ Wed, 28 Jun 2017 07:07:28: 63000000 INFO @ Wed, 28 Jun 2017 07:07:29: 59000000 INFO @ Wed, 28 Jun 2017 07:07:31: 67000000 INFO @ Wed, 28 Jun 2017 07:07:36: 64000000 INFO @ Wed, 28 Jun 2017 07:07:38: 60000000 INFO @ Wed, 28 Jun 2017 07:07:38: 68000000 INFO @ Wed, 28 Jun 2017 07:07:43: 65000000 INFO @ Wed, 28 Jun 2017 07:07:46: 69000000 INFO @ Wed, 28 Jun 2017 07:07:46: 61000000 INFO @ Wed, 28 Jun 2017 07:07:51: 66000000 INFO @ Wed, 28 Jun 2017 07:07:53: 70000000 INFO @ Wed, 28 Jun 2017 07:07:55: 62000000 INFO @ Wed, 28 Jun 2017 07:07:58: 67000000 INFO @ Wed, 28 Jun 2017 07:08:00: 71000000 INFO @ Wed, 28 Jun 2017 07:08:03: 63000000 INFO @ Wed, 28 Jun 2017 07:08:06: 68000000 INFO @ Wed, 28 Jun 2017 07:08:07: 72000000 INFO @ Wed, 28 Jun 2017 07:08:12: 64000000 INFO @ Wed, 28 Jun 2017 07:08:13: 69000000 INFO @ Wed, 28 Jun 2017 07:08:15: 73000000 INFO @ Wed, 28 Jun 2017 07:08:20: 65000000 INFO @ Wed, 28 Jun 2017 07:08:21: 70000000 INFO @ Wed, 28 Jun 2017 07:08:22: 74000000 INFO @ Wed, 28 Jun 2017 07:08:28: 71000000 INFO @ Wed, 28 Jun 2017 07:08:29: 66000000 INFO @ Wed, 28 Jun 2017 07:08:29: 75000000 INFO @ Wed, 28 Jun 2017 07:08:36: 72000000 INFO @ Wed, 28 Jun 2017 07:08:36: 76000000 INFO @ Wed, 28 Jun 2017 07:08:37: 67000000 INFO @ Wed, 28 Jun 2017 07:08:43: 73000000 INFO @ Wed, 28 Jun 2017 07:08:44: 77000000 INFO @ Wed, 28 Jun 2017 07:08:46: 68000000 INFO @ Wed, 28 Jun 2017 07:08:51: 74000000 INFO @ Wed, 28 Jun 2017 07:08:51: 78000000 INFO @ Wed, 28 Jun 2017 07:08:54: 69000000 INFO @ Wed, 28 Jun 2017 07:08:58: 75000000 INFO @ Wed, 28 Jun 2017 07:08:58: 79000000 INFO @ Wed, 28 Jun 2017 07:09:02: 70000000 INFO @ Wed, 28 Jun 2017 07:09:05: 80000000 INFO @ Wed, 28 Jun 2017 07:09:06: 76000000 INFO @ Wed, 28 Jun 2017 07:09:11: 71000000 INFO @ Wed, 28 Jun 2017 07:09:12: 81000000 INFO @ Wed, 28 Jun 2017 07:09:13: 77000000 INFO @ Wed, 28 Jun 2017 07:09:15: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:09:15: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:09:15: #1 total tags in treatment: 39244223 INFO @ Wed, 28 Jun 2017 07:09:15: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:09:15: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:09:16: #1 tags after filtering in treatment: 17495679 INFO @ Wed, 28 Jun 2017 07:09:16: #1 Redundant rate of treatment: 0.55 INFO @ Wed, 28 Jun 2017 07:09:16: #1 finished! INFO @ Wed, 28 Jun 2017 07:09:16: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:09:16: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:09:17: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:09:17: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:09:17: Process for pairing-model is terminated! cat: SRX1631861.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631861.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631861.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631861.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 07:09:17: 72000000 INFO @ Wed, 28 Jun 2017 07:09:20: 78000000 INFO @ Wed, 28 Jun 2017 07:09:23: 73000000 INFO @ Wed, 28 Jun 2017 07:09:28: 79000000 INFO @ Wed, 28 Jun 2017 07:09:29: 74000000 INFO @ Wed, 28 Jun 2017 07:09:34: 75000000 INFO @ Wed, 28 Jun 2017 07:09:35: 80000000 INFO @ Wed, 28 Jun 2017 07:09:40: 76000000 INFO @ Wed, 28 Jun 2017 07:09:42: 81000000 INFO @ Wed, 28 Jun 2017 07:09:45: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:09:45: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:09:45: #1 total tags in treatment: 39244223 INFO @ Wed, 28 Jun 2017 07:09:45: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:09:45: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:09:46: 77000000 INFO @ Wed, 28 Jun 2017 07:09:46: #1 tags after filtering in treatment: 17495679 INFO @ Wed, 28 Jun 2017 07:09:46: #1 Redundant rate of treatment: 0.55 INFO @ Wed, 28 Jun 2017 07:09:46: #1 finished! INFO @ Wed, 28 Jun 2017 07:09:46: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:09:46: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:09:47: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:09:47: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:09:47: Process for pairing-model is terminated! cat: SRX1631861.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631861.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631861.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631861.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 07:09:52: 78000000 INFO @ Wed, 28 Jun 2017 07:09:57: 79000000 INFO @ Wed, 28 Jun 2017 07:10:03: 80000000 INFO @ Wed, 28 Jun 2017 07:10:08: 81000000 INFO @ Wed, 28 Jun 2017 07:10:11: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:10:11: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:10:11: #1 total tags in treatment: 39244223 INFO @ Wed, 28 Jun 2017 07:10:11: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:10:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:10:12: #1 tags after filtering in treatment: 17495679 INFO @ Wed, 28 Jun 2017 07:10:12: #1 Redundant rate of treatment: 0.55 INFO @ Wed, 28 Jun 2017 07:10:12: #1 finished! INFO @ Wed, 28 Jun 2017 07:10:12: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:10:12: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:10:13: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:10:13: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:10:13: Process for pairing-model is terminated! cat: SRX1631861.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631861.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631861.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631861.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling