Job ID = 9162114 sra ファイルのダウンロード中... Completed: 2552055K bytes transferred in 40 seconds (520917K bits/sec), in 1 file, 2 directories. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Written 43140075 spots for /home/okishinya/chipatlas/results/sacCer3/SRX1631860/SRR3225807.sra Written 43140075 spots total rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:35:28 43140075 reads; of these: 43140075 (100.00%) were paired; of these: 2262447 (5.24%) aligned concordantly 0 times 34745677 (80.54%) aligned concordantly exactly 1 time 6131951 (14.21%) aligned concordantly >1 times ---- 2262447 pairs aligned concordantly 0 times; of these: 636440 (28.13%) aligned discordantly 1 time ---- 1626007 pairs aligned 0 times concordantly or discordantly; of these: 3252014 mates make up the pairs; of these: 2616072 (80.44%) aligned 0 times 265527 (8.17%) aligned exactly 1 time 370415 (11.39%) aligned >1 times 96.97% overall alignment rate Time searching: 00:35:28 Overall time: 00:35:28 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 36 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 2197399 / 41331623 = 0.0532 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Wed, 28 Jun 2017 06:58:54: # Command line: callpeak -t SRX1631860.bam -f BAM -g 12100000 -n SRX1631860.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX1631860.20 # format = BAM # ChIP-seq file = ['SRX1631860.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 06:58:54: # Command line: callpeak -t SRX1631860.bam -f BAM -g 12100000 -n SRX1631860.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX1631860.05 # format = BAM # ChIP-seq file = ['SRX1631860.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 06:58:54: # Command line: callpeak -t SRX1631860.bam -f BAM -g 12100000 -n SRX1631860.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX1631860.10 # format = BAM # ChIP-seq file = ['SRX1631860.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 06:58:54: #1 read tag files... INFO @ Wed, 28 Jun 2017 06:58:54: #1 read tag files... INFO @ Wed, 28 Jun 2017 06:58:54: #1 read tag files... INFO @ Wed, 28 Jun 2017 06:58:54: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 06:58:54: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 06:58:54: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 06:59:01: 1000000 INFO @ Wed, 28 Jun 2017 06:59:01: 1000000 INFO @ Wed, 28 Jun 2017 06:59:01: 1000000 INFO @ Wed, 28 Jun 2017 06:59:07: 2000000 INFO @ Wed, 28 Jun 2017 06:59:08: 2000000 INFO @ Wed, 28 Jun 2017 06:59:08: 2000000 INFO @ Wed, 28 Jun 2017 06:59:14: 3000000 INFO @ Wed, 28 Jun 2017 06:59:15: 3000000 INFO @ Wed, 28 Jun 2017 06:59:15: 3000000 INFO @ Wed, 28 Jun 2017 06:59:21: 4000000 INFO @ Wed, 28 Jun 2017 06:59:21: 4000000 INFO @ Wed, 28 Jun 2017 06:59:22: 4000000 INFO @ Wed, 28 Jun 2017 06:59:27: 5000000 INFO @ Wed, 28 Jun 2017 06:59:28: 5000000 INFO @ Wed, 28 Jun 2017 06:59:29: 5000000 INFO @ Wed, 28 Jun 2017 06:59:34: 6000000 INFO @ Wed, 28 Jun 2017 06:59:35: 6000000 INFO @ Wed, 28 Jun 2017 06:59:36: 6000000 INFO @ Wed, 28 Jun 2017 06:59:40: 7000000 INFO @ Wed, 28 Jun 2017 06:59:42: 7000000 INFO @ Wed, 28 Jun 2017 06:59:44: 7000000 INFO @ Wed, 28 Jun 2017 06:59:47: 8000000 INFO @ Wed, 28 Jun 2017 06:59:50: 8000000 INFO @ Wed, 28 Jun 2017 06:59:52: 8000000 INFO @ Wed, 28 Jun 2017 06:59:55: 9000000 INFO @ Wed, 28 Jun 2017 06:59:58: 9000000 INFO @ Wed, 28 Jun 2017 07:00:00: 9000000 INFO @ Wed, 28 Jun 2017 07:00:03: 10000000 INFO @ Wed, 28 Jun 2017 07:00:06: 10000000 INFO @ Wed, 28 Jun 2017 07:00:08: 10000000 INFO @ Wed, 28 Jun 2017 07:00:12: 11000000 INFO @ Wed, 28 Jun 2017 07:00:14: 11000000 INFO @ Wed, 28 Jun 2017 07:00:16: 11000000 INFO @ Wed, 28 Jun 2017 07:00:20: 12000000 INFO @ Wed, 28 Jun 2017 07:00:22: 12000000 INFO @ Wed, 28 Jun 2017 07:00:26: 12000000 INFO @ Wed, 28 Jun 2017 07:00:29: 13000000 INFO @ Wed, 28 Jun 2017 07:00:29: 13000000 INFO @ Wed, 28 Jun 2017 07:00:36: 13000000 INFO @ Wed, 28 Jun 2017 07:00:36: 14000000 INFO @ Wed, 28 Jun 2017 07:00:38: 14000000 INFO @ Wed, 28 Jun 2017 07:00:44: 15000000 INFO @ Wed, 28 Jun 2017 07:00:46: 14000000 INFO @ Wed, 28 Jun 2017 07:00:48: 15000000 INFO @ Wed, 28 Jun 2017 07:00:51: 16000000 INFO @ Wed, 28 Jun 2017 07:00:56: 15000000 INFO @ Wed, 28 Jun 2017 07:00:56: 16000000 INFO @ Wed, 28 Jun 2017 07:00:59: 17000000 INFO @ Wed, 28 Jun 2017 07:01:05: 17000000 INFO @ Wed, 28 Jun 2017 07:01:06: 16000000 INFO @ Wed, 28 Jun 2017 07:01:06: 18000000 INFO @ Wed, 28 Jun 2017 07:01:14: 19000000 INFO @ Wed, 28 Jun 2017 07:01:14: 18000000 INFO @ Wed, 28 Jun 2017 07:01:16: 17000000 INFO @ Wed, 28 Jun 2017 07:01:21: 20000000 INFO @ Wed, 28 Jun 2017 07:01:23: 19000000 INFO @ Wed, 28 Jun 2017 07:01:26: 18000000 INFO @ Wed, 28 Jun 2017 07:01:28: 21000000 INFO @ Wed, 28 Jun 2017 07:01:32: 20000000 INFO @ Wed, 28 Jun 2017 07:01:35: 22000000 INFO @ Wed, 28 Jun 2017 07:01:36: 19000000 INFO @ Wed, 28 Jun 2017 07:01:41: 21000000 INFO @ Wed, 28 Jun 2017 07:01:42: 23000000 INFO @ Wed, 28 Jun 2017 07:01:46: 20000000 INFO @ Wed, 28 Jun 2017 07:01:50: 22000000 INFO @ Wed, 28 Jun 2017 07:01:50: 24000000 INFO @ Wed, 28 Jun 2017 07:01:55: 21000000 INFO @ Wed, 28 Jun 2017 07:01:57: 25000000 INFO @ Wed, 28 Jun 2017 07:01:58: 23000000 INFO @ Wed, 28 Jun 2017 07:02:04: 26000000 INFO @ Wed, 28 Jun 2017 07:02:05: 22000000 INFO @ Wed, 28 Jun 2017 07:02:07: 24000000 INFO @ Wed, 28 Jun 2017 07:02:11: 27000000 INFO @ Wed, 28 Jun 2017 07:02:15: 23000000 INFO @ Wed, 28 Jun 2017 07:02:16: 25000000 INFO @ Wed, 28 Jun 2017 07:02:18: 28000000 INFO @ Wed, 28 Jun 2017 07:02:25: 24000000 INFO @ Wed, 28 Jun 2017 07:02:25: 26000000 INFO @ Wed, 28 Jun 2017 07:02:26: 29000000 INFO @ Wed, 28 Jun 2017 07:02:33: 30000000 INFO @ Wed, 28 Jun 2017 07:02:34: 27000000 INFO @ Wed, 28 Jun 2017 07:02:35: 25000000 INFO @ Wed, 28 Jun 2017 07:02:40: 31000000 INFO @ Wed, 28 Jun 2017 07:02:42: 28000000 INFO @ Wed, 28 Jun 2017 07:02:44: 26000000 INFO @ Wed, 28 Jun 2017 07:02:47: 32000000 INFO @ Wed, 28 Jun 2017 07:02:51: 29000000 INFO @ Wed, 28 Jun 2017 07:02:54: 27000000 INFO @ Wed, 28 Jun 2017 07:02:54: 33000000 INFO @ Wed, 28 Jun 2017 07:03:00: 30000000 INFO @ Wed, 28 Jun 2017 07:03:02: 34000000 INFO @ Wed, 28 Jun 2017 07:03:04: 28000000 INFO @ Wed, 28 Jun 2017 07:03:09: 35000000 INFO @ Wed, 28 Jun 2017 07:03:09: 31000000 INFO @ Wed, 28 Jun 2017 07:03:14: 29000000 INFO @ Wed, 28 Jun 2017 07:03:16: 36000000 INFO @ Wed, 28 Jun 2017 07:03:18: 32000000 INFO @ Wed, 28 Jun 2017 07:03:23: 37000000 INFO @ Wed, 28 Jun 2017 07:03:24: 30000000 INFO @ Wed, 28 Jun 2017 07:03:27: 33000000 INFO @ Wed, 28 Jun 2017 07:03:31: 38000000 INFO @ Wed, 28 Jun 2017 07:03:33: 31000000 INFO @ Wed, 28 Jun 2017 07:03:36: 34000000 INFO @ Wed, 28 Jun 2017 07:03:38: 39000000 INFO @ Wed, 28 Jun 2017 07:03:43: 32000000 INFO @ Wed, 28 Jun 2017 07:03:44: 35000000 INFO @ Wed, 28 Jun 2017 07:03:46: 40000000 INFO @ Wed, 28 Jun 2017 07:03:51: 33000000 INFO @ Wed, 28 Jun 2017 07:03:53: 36000000 INFO @ Wed, 28 Jun 2017 07:03:54: 41000000 INFO @ Wed, 28 Jun 2017 07:04:01: 34000000 INFO @ Wed, 28 Jun 2017 07:04:01: 37000000 INFO @ Wed, 28 Jun 2017 07:04:02: 42000000 INFO @ Wed, 28 Jun 2017 07:04:10: 38000000 INFO @ Wed, 28 Jun 2017 07:04:10: 43000000 INFO @ Wed, 28 Jun 2017 07:04:10: 35000000 INFO @ Wed, 28 Jun 2017 07:04:18: 44000000 INFO @ Wed, 28 Jun 2017 07:04:18: 39000000 INFO @ Wed, 28 Jun 2017 07:04:19: 36000000 INFO @ Wed, 28 Jun 2017 07:04:25: 45000000 INFO @ Wed, 28 Jun 2017 07:04:26: 40000000 INFO @ Wed, 28 Jun 2017 07:04:28: 37000000 INFO @ Wed, 28 Jun 2017 07:04:33: 46000000 INFO @ Wed, 28 Jun 2017 07:04:34: 41000000 INFO @ Wed, 28 Jun 2017 07:04:37: 38000000 INFO @ Wed, 28 Jun 2017 07:04:41: 47000000 INFO @ Wed, 28 Jun 2017 07:04:43: 42000000 INFO @ Wed, 28 Jun 2017 07:04:46: 39000000 INFO @ Wed, 28 Jun 2017 07:04:49: 48000000 INFO @ Wed, 28 Jun 2017 07:04:51: 43000000 INFO @ Wed, 28 Jun 2017 07:04:55: 40000000 INFO @ Wed, 28 Jun 2017 07:04:57: 49000000 INFO @ Wed, 28 Jun 2017 07:04:59: 44000000 INFO @ Wed, 28 Jun 2017 07:05:03: 41000000 INFO @ Wed, 28 Jun 2017 07:05:05: 50000000 INFO @ Wed, 28 Jun 2017 07:05:08: 45000000 INFO @ Wed, 28 Jun 2017 07:05:12: 42000000 INFO @ Wed, 28 Jun 2017 07:05:13: 51000000 INFO @ Wed, 28 Jun 2017 07:05:16: 46000000 INFO @ Wed, 28 Jun 2017 07:05:21: 43000000 INFO @ Wed, 28 Jun 2017 07:05:21: 52000000 INFO @ Wed, 28 Jun 2017 07:05:24: 47000000 INFO @ Wed, 28 Jun 2017 07:05:29: 53000000 INFO @ Wed, 28 Jun 2017 07:05:30: 44000000 INFO @ Wed, 28 Jun 2017 07:05:33: 48000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 28 Jun 2017 07:05:37: 54000000 INFO @ Wed, 28 Jun 2017 07:05:39: 45000000 INFO @ Wed, 28 Jun 2017 07:05:41: 49000000 INFO @ Wed, 28 Jun 2017 07:05:45: 55000000 INFO @ Wed, 28 Jun 2017 07:05:48: 46000000 INFO @ Wed, 28 Jun 2017 07:05:49: 50000000 INFO @ Wed, 28 Jun 2017 07:05:53: 56000000 INFO @ Wed, 28 Jun 2017 07:05:57: 47000000 INFO @ Wed, 28 Jun 2017 07:05:58: 51000000 BigWig に変換しました。 INFO @ Wed, 28 Jun 2017 07:06:02: 57000000 INFO @ Wed, 28 Jun 2017 07:06:06: 48000000 INFO @ Wed, 28 Jun 2017 07:06:06: 52000000 INFO @ Wed, 28 Jun 2017 07:06:10: 58000000 INFO @ Wed, 28 Jun 2017 07:06:15: 53000000 INFO @ Wed, 28 Jun 2017 07:06:16: 49000000 INFO @ Wed, 28 Jun 2017 07:06:19: 59000000 INFO @ Wed, 28 Jun 2017 07:06:24: 54000000 INFO @ Wed, 28 Jun 2017 07:06:25: 50000000 INFO @ Wed, 28 Jun 2017 07:06:27: 60000000 INFO @ Wed, 28 Jun 2017 07:06:32: 55000000 INFO @ Wed, 28 Jun 2017 07:06:34: 51000000 INFO @ Wed, 28 Jun 2017 07:06:36: 61000000 INFO @ Wed, 28 Jun 2017 07:06:41: 56000000 INFO @ Wed, 28 Jun 2017 07:06:44: 52000000 INFO @ Wed, 28 Jun 2017 07:06:45: 62000000 INFO @ Wed, 28 Jun 2017 07:06:49: 57000000 INFO @ Wed, 28 Jun 2017 07:06:53: 63000000 INFO @ Wed, 28 Jun 2017 07:06:53: 53000000 INFO @ Wed, 28 Jun 2017 07:06:57: 58000000 INFO @ Wed, 28 Jun 2017 07:07:02: 64000000 INFO @ Wed, 28 Jun 2017 07:07:02: 54000000 INFO @ Wed, 28 Jun 2017 07:07:06: 59000000 INFO @ Wed, 28 Jun 2017 07:07:10: 65000000 INFO @ Wed, 28 Jun 2017 07:07:12: 55000000 INFO @ Wed, 28 Jun 2017 07:07:14: 60000000 INFO @ Wed, 28 Jun 2017 07:07:19: 66000000 INFO @ Wed, 28 Jun 2017 07:07:21: 56000000 INFO @ Wed, 28 Jun 2017 07:07:22: 61000000 INFO @ Wed, 28 Jun 2017 07:07:27: 67000000 INFO @ Wed, 28 Jun 2017 07:07:31: 57000000 INFO @ Wed, 28 Jun 2017 07:07:31: 62000000 INFO @ Wed, 28 Jun 2017 07:07:36: 68000000 INFO @ Wed, 28 Jun 2017 07:07:39: 63000000 INFO @ Wed, 28 Jun 2017 07:07:40: 58000000 INFO @ Wed, 28 Jun 2017 07:07:44: 69000000 INFO @ Wed, 28 Jun 2017 07:07:47: 64000000 INFO @ Wed, 28 Jun 2017 07:07:49: 59000000 INFO @ Wed, 28 Jun 2017 07:07:53: 70000000 INFO @ Wed, 28 Jun 2017 07:07:56: 65000000 INFO @ Wed, 28 Jun 2017 07:07:58: 60000000 INFO @ Wed, 28 Jun 2017 07:08:01: 71000000 INFO @ Wed, 28 Jun 2017 07:08:04: 66000000 INFO @ Wed, 28 Jun 2017 07:08:07: 61000000 INFO @ Wed, 28 Jun 2017 07:08:10: 72000000 INFO @ Wed, 28 Jun 2017 07:08:13: 67000000 INFO @ Wed, 28 Jun 2017 07:08:17: 62000000 INFO @ Wed, 28 Jun 2017 07:08:19: 73000000 INFO @ Wed, 28 Jun 2017 07:08:21: 68000000 INFO @ Wed, 28 Jun 2017 07:08:26: 63000000 INFO @ Wed, 28 Jun 2017 07:08:27: 74000000 INFO @ Wed, 28 Jun 2017 07:08:29: 69000000 INFO @ Wed, 28 Jun 2017 07:08:35: 64000000 INFO @ Wed, 28 Jun 2017 07:08:36: 75000000 INFO @ Wed, 28 Jun 2017 07:08:38: 70000000 INFO @ Wed, 28 Jun 2017 07:08:44: 65000000 INFO @ Wed, 28 Jun 2017 07:08:44: 76000000 INFO @ Wed, 28 Jun 2017 07:08:46: 71000000 INFO @ Wed, 28 Jun 2017 07:08:53: 77000000 INFO @ Wed, 28 Jun 2017 07:08:53: 66000000 INFO @ Wed, 28 Jun 2017 07:08:54: 72000000 INFO @ Wed, 28 Jun 2017 07:09:01: 78000000 INFO @ Wed, 28 Jun 2017 07:09:03: 67000000 INFO @ Wed, 28 Jun 2017 07:09:03: 73000000 INFO @ Wed, 28 Jun 2017 07:09:10: 79000000 INFO @ Wed, 28 Jun 2017 07:09:11: 74000000 INFO @ Wed, 28 Jun 2017 07:09:12: 68000000 INFO @ Wed, 28 Jun 2017 07:09:13: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:09:13: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:09:13: #1 total tags in treatment: 38686256 INFO @ Wed, 28 Jun 2017 07:09:13: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:09:13: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:09:14: #1 tags after filtering in treatment: 17332376 INFO @ Wed, 28 Jun 2017 07:09:14: #1 Redundant rate of treatment: 0.55 INFO @ Wed, 28 Jun 2017 07:09:14: #1 finished! INFO @ Wed, 28 Jun 2017 07:09:14: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:09:14: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:09:15: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:09:15: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:09:15: Process for pairing-model is terminated! cat: SRX1631860.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631860.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631860.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631860.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 07:09:19: 75000000 INFO @ Wed, 28 Jun 2017 07:09:21: 69000000 INFO @ Wed, 28 Jun 2017 07:09:27: 76000000 INFO @ Wed, 28 Jun 2017 07:09:29: 70000000 INFO @ Wed, 28 Jun 2017 07:09:35: 77000000 INFO @ Wed, 28 Jun 2017 07:09:38: 71000000 INFO @ Wed, 28 Jun 2017 07:09:43: 78000000 INFO @ Wed, 28 Jun 2017 07:09:46: 72000000 INFO @ Wed, 28 Jun 2017 07:09:50: 79000000 INFO @ Wed, 28 Jun 2017 07:09:52: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:09:52: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:09:52: #1 total tags in treatment: 38686256 INFO @ Wed, 28 Jun 2017 07:09:52: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:09:52: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:09:53: 73000000 INFO @ Wed, 28 Jun 2017 07:09:53: #1 tags after filtering in treatment: 17332376 INFO @ Wed, 28 Jun 2017 07:09:53: #1 Redundant rate of treatment: 0.55 INFO @ Wed, 28 Jun 2017 07:09:53: #1 finished! INFO @ Wed, 28 Jun 2017 07:09:53: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:09:53: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:09:54: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:09:54: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:09:54: Process for pairing-model is terminated! cat: SRX1631860.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631860.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631860.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631860.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 07:10:00: 74000000 INFO @ Wed, 28 Jun 2017 07:10:06: 75000000 INFO @ Wed, 28 Jun 2017 07:10:12: 76000000 INFO @ Wed, 28 Jun 2017 07:10:18: 77000000 INFO @ Wed, 28 Jun 2017 07:10:25: 78000000 INFO @ Wed, 28 Jun 2017 07:10:31: 79000000 INFO @ Wed, 28 Jun 2017 07:10:33: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:10:33: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:10:33: #1 total tags in treatment: 38686256 INFO @ Wed, 28 Jun 2017 07:10:33: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:10:33: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:10:34: #1 tags after filtering in treatment: 17332376 INFO @ Wed, 28 Jun 2017 07:10:34: #1 Redundant rate of treatment: 0.55 INFO @ Wed, 28 Jun 2017 07:10:34: #1 finished! INFO @ Wed, 28 Jun 2017 07:10:34: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:10:34: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:10:35: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:10:35: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:10:35: Process for pairing-model is terminated! cat: SRX1631860.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631860.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631860.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631860.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling