Job ID = 9162112 sra ファイルのダウンロード中... Completed: 3233678K bytes transferred in 40 seconds (654514K bits/sec), in 1 file, 2 directories. sra ファイルのダウンロードが完了しました。 Read layout: PAIRED fastq に変換中... Written 54554863 spots for /home/okishinya/chipatlas/results/sacCer3/SRX1631858/SRR3225805.sra Written 54554863 spots total rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:47:16 54554863 reads; of these: 54554863 (100.00%) were paired; of these: 2482210 (4.55%) aligned concordantly 0 times 46950590 (86.06%) aligned concordantly exactly 1 time 5122063 (9.39%) aligned concordantly >1 times ---- 2482210 pairs aligned concordantly 0 times; of these: 1181648 (47.60%) aligned discordantly 1 time ---- 1300562 pairs aligned 0 times concordantly or discordantly; of these: 2601124 mates make up the pairs; of these: 1876874 (72.16%) aligned 0 times 379622 (14.59%) aligned exactly 1 time 344628 (13.25%) aligned >1 times 98.28% overall alignment rate Time searching: 00:47:16 Overall time: 00:47:16 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 44 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 2949592 / 52948486 = 0.0557 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Wed, 28 Jun 2017 07:19:11: # Command line: callpeak -t SRX1631858.bam -f BAM -g 12100000 -n SRX1631858.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX1631858.10 # format = BAM # ChIP-seq file = ['SRX1631858.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 07:19:11: # Command line: callpeak -t SRX1631858.bam -f BAM -g 12100000 -n SRX1631858.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX1631858.05 # format = BAM # ChIP-seq file = ['SRX1631858.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 07:19:11: #1 read tag files... INFO @ Wed, 28 Jun 2017 07:19:11: #1 read tag files... INFO @ Wed, 28 Jun 2017 07:19:11: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 07:19:11: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 07:19:11: # Command line: callpeak -t SRX1631858.bam -f BAM -g 12100000 -n SRX1631858.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX1631858.20 # format = BAM # ChIP-seq file = ['SRX1631858.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Wed, 28 Jun 2017 07:19:11: #1 read tag files... INFO @ Wed, 28 Jun 2017 07:19:11: #1 read treatment tags... INFO @ Wed, 28 Jun 2017 07:19:18: 1000000 INFO @ Wed, 28 Jun 2017 07:19:18: 1000000 INFO @ Wed, 28 Jun 2017 07:19:18: 1000000 INFO @ Wed, 28 Jun 2017 07:19:25: 2000000 INFO @ Wed, 28 Jun 2017 07:19:26: 2000000 INFO @ Wed, 28 Jun 2017 07:19:26: 2000000 INFO @ Wed, 28 Jun 2017 07:19:32: 3000000 INFO @ Wed, 28 Jun 2017 07:19:33: 3000000 INFO @ Wed, 28 Jun 2017 07:19:33: 3000000 INFO @ Wed, 28 Jun 2017 07:19:39: 4000000 INFO @ Wed, 28 Jun 2017 07:19:41: 4000000 INFO @ Wed, 28 Jun 2017 07:19:41: 4000000 INFO @ Wed, 28 Jun 2017 07:19:45: 5000000 INFO @ Wed, 28 Jun 2017 07:19:48: 5000000 INFO @ Wed, 28 Jun 2017 07:19:48: 5000000 INFO @ Wed, 28 Jun 2017 07:19:52: 6000000 INFO @ Wed, 28 Jun 2017 07:19:55: 6000000 INFO @ Wed, 28 Jun 2017 07:19:55: 6000000 INFO @ Wed, 28 Jun 2017 07:19:59: 7000000 INFO @ Wed, 28 Jun 2017 07:20:03: 7000000 INFO @ Wed, 28 Jun 2017 07:20:03: 7000000 INFO @ Wed, 28 Jun 2017 07:20:06: 8000000 INFO @ Wed, 28 Jun 2017 07:20:11: 8000000 INFO @ Wed, 28 Jun 2017 07:20:11: 8000000 INFO @ Wed, 28 Jun 2017 07:20:13: 9000000 INFO @ Wed, 28 Jun 2017 07:20:19: 9000000 INFO @ Wed, 28 Jun 2017 07:20:19: 9000000 INFO @ Wed, 28 Jun 2017 07:20:20: 10000000 INFO @ Wed, 28 Jun 2017 07:20:27: 11000000 INFO @ Wed, 28 Jun 2017 07:20:27: 10000000 INFO @ Wed, 28 Jun 2017 07:20:27: 10000000 INFO @ Wed, 28 Jun 2017 07:20:33: 12000000 INFO @ Wed, 28 Jun 2017 07:20:35: 11000000 INFO @ Wed, 28 Jun 2017 07:20:35: 11000000 INFO @ Wed, 28 Jun 2017 07:20:40: 13000000 INFO @ Wed, 28 Jun 2017 07:20:42: 12000000 INFO @ Wed, 28 Jun 2017 07:20:43: 12000000 INFO @ Wed, 28 Jun 2017 07:20:47: 14000000 INFO @ Wed, 28 Jun 2017 07:20:50: 13000000 INFO @ Wed, 28 Jun 2017 07:20:50: 13000000 INFO @ Wed, 28 Jun 2017 07:20:54: 15000000 INFO @ Wed, 28 Jun 2017 07:20:58: 14000000 INFO @ Wed, 28 Jun 2017 07:20:58: 14000000 INFO @ Wed, 28 Jun 2017 07:21:01: 16000000 INFO @ Wed, 28 Jun 2017 07:21:06: 15000000 INFO @ Wed, 28 Jun 2017 07:21:06: 15000000 INFO @ Wed, 28 Jun 2017 07:21:08: 17000000 INFO @ Wed, 28 Jun 2017 07:21:14: 16000000 INFO @ Wed, 28 Jun 2017 07:21:14: 16000000 INFO @ Wed, 28 Jun 2017 07:21:15: 18000000 INFO @ Wed, 28 Jun 2017 07:21:22: 19000000 INFO @ Wed, 28 Jun 2017 07:21:22: 17000000 INFO @ Wed, 28 Jun 2017 07:21:22: 17000000 INFO @ Wed, 28 Jun 2017 07:21:28: 20000000 INFO @ Wed, 28 Jun 2017 07:21:30: 18000000 INFO @ Wed, 28 Jun 2017 07:21:30: 18000000 INFO @ Wed, 28 Jun 2017 07:21:35: 21000000 INFO @ Wed, 28 Jun 2017 07:21:38: 19000000 INFO @ Wed, 28 Jun 2017 07:21:38: 19000000 INFO @ Wed, 28 Jun 2017 07:21:42: 22000000 INFO @ Wed, 28 Jun 2017 07:21:46: 20000000 INFO @ Wed, 28 Jun 2017 07:21:46: 20000000 INFO @ Wed, 28 Jun 2017 07:21:49: 23000000 INFO @ Wed, 28 Jun 2017 07:21:54: 21000000 INFO @ Wed, 28 Jun 2017 07:21:54: 21000000 INFO @ Wed, 28 Jun 2017 07:21:56: 24000000 INFO @ Wed, 28 Jun 2017 07:22:02: 22000000 INFO @ Wed, 28 Jun 2017 07:22:02: 22000000 INFO @ Wed, 28 Jun 2017 07:22:03: 25000000 INFO @ Wed, 28 Jun 2017 07:22:09: 26000000 INFO @ Wed, 28 Jun 2017 07:22:10: 23000000 INFO @ Wed, 28 Jun 2017 07:22:10: 23000000 INFO @ Wed, 28 Jun 2017 07:22:16: 27000000 INFO @ Wed, 28 Jun 2017 07:22:18: 24000000 INFO @ Wed, 28 Jun 2017 07:22:18: 24000000 INFO @ Wed, 28 Jun 2017 07:22:23: 28000000 INFO @ Wed, 28 Jun 2017 07:22:26: 25000000 INFO @ Wed, 28 Jun 2017 07:22:26: 25000000 INFO @ Wed, 28 Jun 2017 07:22:30: 29000000 INFO @ Wed, 28 Jun 2017 07:22:34: 26000000 INFO @ Wed, 28 Jun 2017 07:22:34: 26000000 INFO @ Wed, 28 Jun 2017 07:22:36: 30000000 INFO @ Wed, 28 Jun 2017 07:22:42: 27000000 INFO @ Wed, 28 Jun 2017 07:22:42: 27000000 INFO @ Wed, 28 Jun 2017 07:22:43: 31000000 INFO @ Wed, 28 Jun 2017 07:22:50: 28000000 INFO @ Wed, 28 Jun 2017 07:22:50: 28000000 INFO @ Wed, 28 Jun 2017 07:22:50: 32000000 INFO @ Wed, 28 Jun 2017 07:22:57: 33000000 INFO @ Wed, 28 Jun 2017 07:22:57: 29000000 INFO @ Wed, 28 Jun 2017 07:22:57: 29000000 INFO @ Wed, 28 Jun 2017 07:23:04: 34000000 INFO @ Wed, 28 Jun 2017 07:23:05: 30000000 INFO @ Wed, 28 Jun 2017 07:23:05: 30000000 INFO @ Wed, 28 Jun 2017 07:23:10: 35000000 INFO @ Wed, 28 Jun 2017 07:23:12: 31000000 INFO @ Wed, 28 Jun 2017 07:23:12: 31000000 INFO @ Wed, 28 Jun 2017 07:23:17: 36000000 INFO @ Wed, 28 Jun 2017 07:23:20: 32000000 INFO @ Wed, 28 Jun 2017 07:23:20: 32000000 INFO @ Wed, 28 Jun 2017 07:23:24: 37000000 INFO @ Wed, 28 Jun 2017 07:23:27: 33000000 INFO @ Wed, 28 Jun 2017 07:23:27: 33000000 INFO @ Wed, 28 Jun 2017 07:23:31: 38000000 INFO @ Wed, 28 Jun 2017 07:23:35: 34000000 INFO @ Wed, 28 Jun 2017 07:23:35: 34000000 INFO @ Wed, 28 Jun 2017 07:23:37: 39000000 INFO @ Wed, 28 Jun 2017 07:23:42: 35000000 INFO @ Wed, 28 Jun 2017 07:23:42: 35000000 INFO @ Wed, 28 Jun 2017 07:23:44: 40000000 INFO @ Wed, 28 Jun 2017 07:23:50: 36000000 INFO @ Wed, 28 Jun 2017 07:23:50: 36000000 INFO @ Wed, 28 Jun 2017 07:23:51: 41000000 INFO @ Wed, 28 Jun 2017 07:23:57: 37000000 INFO @ Wed, 28 Jun 2017 07:23:57: 37000000 INFO @ Wed, 28 Jun 2017 07:23:58: 42000000 INFO @ Wed, 28 Jun 2017 07:24:05: 43000000 INFO @ Wed, 28 Jun 2017 07:24:05: 38000000 INFO @ Wed, 28 Jun 2017 07:24:05: 38000000 INFO @ Wed, 28 Jun 2017 07:24:11: 44000000 INFO @ Wed, 28 Jun 2017 07:24:12: 39000000 INFO @ Wed, 28 Jun 2017 07:24:12: 39000000 INFO @ Wed, 28 Jun 2017 07:24:18: 45000000 INFO @ Wed, 28 Jun 2017 07:24:19: 40000000 INFO @ Wed, 28 Jun 2017 07:24:20: 40000000 INFO @ Wed, 28 Jun 2017 07:24:25: 46000000 INFO @ Wed, 28 Jun 2017 07:24:27: 41000000 INFO @ Wed, 28 Jun 2017 07:24:27: 41000000 INFO @ Wed, 28 Jun 2017 07:24:32: 47000000 INFO @ Wed, 28 Jun 2017 07:24:34: 42000000 INFO @ Wed, 28 Jun 2017 07:24:35: 42000000 INFO @ Wed, 28 Jun 2017 07:24:39: 48000000 INFO @ Wed, 28 Jun 2017 07:24:42: 43000000 INFO @ Wed, 28 Jun 2017 07:24:43: 43000000 INFO @ Wed, 28 Jun 2017 07:24:45: 49000000 INFO @ Wed, 28 Jun 2017 07:24:50: 44000000 INFO @ Wed, 28 Jun 2017 07:24:51: 44000000 INFO @ Wed, 28 Jun 2017 07:24:52: 50000000 INFO @ Wed, 28 Jun 2017 07:24:59: 45000000 INFO @ Wed, 28 Jun 2017 07:24:59: 45000000 INFO @ Wed, 28 Jun 2017 07:24:59: 51000000 INFO @ Wed, 28 Jun 2017 07:25:06: 46000000 INFO @ Wed, 28 Jun 2017 07:25:06: 46000000 INFO @ Wed, 28 Jun 2017 07:25:07: 52000000 INFO @ Wed, 28 Jun 2017 07:25:13: 47000000 INFO @ Wed, 28 Jun 2017 07:25:14: 47000000 INFO @ Wed, 28 Jun 2017 07:25:14: 53000000 INFO @ Wed, 28 Jun 2017 07:25:21: 54000000 INFO @ Wed, 28 Jun 2017 07:25:21: 48000000 INFO @ Wed, 28 Jun 2017 07:25:22: 48000000 INFO @ Wed, 28 Jun 2017 07:25:28: 55000000 INFO @ Wed, 28 Jun 2017 07:25:29: 49000000 INFO @ Wed, 28 Jun 2017 07:25:29: 49000000 INFO @ Wed, 28 Jun 2017 07:25:35: 56000000 INFO @ Wed, 28 Jun 2017 07:25:36: 50000000 INFO @ Wed, 28 Jun 2017 07:25:37: 50000000 INFO @ Wed, 28 Jun 2017 07:25:41: 57000000 INFO @ Wed, 28 Jun 2017 07:25:44: 51000000 INFO @ Wed, 28 Jun 2017 07:25:44: 51000000 INFO @ Wed, 28 Jun 2017 07:25:48: 58000000 INFO @ Wed, 28 Jun 2017 07:25:51: 52000000 INFO @ Wed, 28 Jun 2017 07:25:52: 52000000 INFO @ Wed, 28 Jun 2017 07:25:55: 59000000 INFO @ Wed, 28 Jun 2017 07:25:59: 53000000 INFO @ Wed, 28 Jun 2017 07:26:00: 53000000 INFO @ Wed, 28 Jun 2017 07:26:02: 60000000 INFO @ Wed, 28 Jun 2017 07:26:07: 54000000 INFO @ Wed, 28 Jun 2017 07:26:07: 54000000 INFO @ Wed, 28 Jun 2017 07:26:09: 61000000 INFO @ Wed, 28 Jun 2017 07:26:14: 55000000 INFO @ Wed, 28 Jun 2017 07:26:15: 55000000 INFO @ Wed, 28 Jun 2017 07:26:16: 62000000 INFO @ Wed, 28 Jun 2017 07:26:22: 56000000 INFO @ Wed, 28 Jun 2017 07:26:22: 56000000 INFO @ Wed, 28 Jun 2017 07:26:24: 63000000 INFO @ Wed, 28 Jun 2017 07:26:29: 57000000 INFO @ Wed, 28 Jun 2017 07:26:30: 57000000 INFO @ Wed, 28 Jun 2017 07:26:31: 64000000 INFO @ Wed, 28 Jun 2017 07:26:37: 58000000 INFO @ Wed, 28 Jun 2017 07:26:37: 65000000 INFO @ Wed, 28 Jun 2017 07:26:38: 58000000 INFO @ Wed, 28 Jun 2017 07:26:44: 59000000 INFO @ Wed, 28 Jun 2017 07:26:44: 66000000 INFO @ Wed, 28 Jun 2017 07:26:45: 59000000 INFO @ Wed, 28 Jun 2017 07:26:51: 67000000 INFO @ Wed, 28 Jun 2017 07:26:52: 60000000 INFO @ Wed, 28 Jun 2017 07:26:53: 60000000 INFO @ Wed, 28 Jun 2017 07:26:59: 68000000 INFO @ Wed, 28 Jun 2017 07:26:59: 61000000 INFO @ Wed, 28 Jun 2017 07:27:00: 61000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Wed, 28 Jun 2017 07:27:06: 69000000 INFO @ Wed, 28 Jun 2017 07:27:07: 62000000 INFO @ Wed, 28 Jun 2017 07:27:08: 62000000 INFO @ Wed, 28 Jun 2017 07:27:13: 70000000 INFO @ Wed, 28 Jun 2017 07:27:14: 63000000 INFO @ Wed, 28 Jun 2017 07:27:16: 63000000 INFO @ Wed, 28 Jun 2017 07:27:20: 71000000 INFO @ Wed, 28 Jun 2017 07:27:22: 64000000 INFO @ Wed, 28 Jun 2017 07:27:23: 64000000 INFO @ Wed, 28 Jun 2017 07:27:27: 72000000 INFO @ Wed, 28 Jun 2017 07:27:30: 65000000 BigWig に変換しました。 INFO @ Wed, 28 Jun 2017 07:27:31: 65000000 INFO @ Wed, 28 Jun 2017 07:27:34: 73000000 INFO @ Wed, 28 Jun 2017 07:27:38: 66000000 INFO @ Wed, 28 Jun 2017 07:27:39: 66000000 INFO @ Wed, 28 Jun 2017 07:27:41: 74000000 INFO @ Wed, 28 Jun 2017 07:27:45: 67000000 INFO @ Wed, 28 Jun 2017 07:27:47: 67000000 INFO @ Wed, 28 Jun 2017 07:27:48: 75000000 INFO @ Wed, 28 Jun 2017 07:27:53: 68000000 INFO @ Wed, 28 Jun 2017 07:27:55: 68000000 INFO @ Wed, 28 Jun 2017 07:27:57: 76000000 INFO @ Wed, 28 Jun 2017 07:28:01: 69000000 INFO @ Wed, 28 Jun 2017 07:28:03: 69000000 INFO @ Wed, 28 Jun 2017 07:28:06: 77000000 INFO @ Wed, 28 Jun 2017 07:28:09: 70000000 INFO @ Wed, 28 Jun 2017 07:28:11: 70000000 INFO @ Wed, 28 Jun 2017 07:28:15: 78000000 INFO @ Wed, 28 Jun 2017 07:28:17: 71000000 INFO @ Wed, 28 Jun 2017 07:28:19: 71000000 INFO @ Wed, 28 Jun 2017 07:28:24: 79000000 INFO @ Wed, 28 Jun 2017 07:28:25: 72000000 INFO @ Wed, 28 Jun 2017 07:28:27: 72000000 INFO @ Wed, 28 Jun 2017 07:28:33: 80000000 INFO @ Wed, 28 Jun 2017 07:28:33: 73000000 INFO @ Wed, 28 Jun 2017 07:28:35: 73000000 INFO @ Wed, 28 Jun 2017 07:28:41: 74000000 INFO @ Wed, 28 Jun 2017 07:28:41: 81000000 INFO @ Wed, 28 Jun 2017 07:28:43: 74000000 INFO @ Wed, 28 Jun 2017 07:28:49: 75000000 INFO @ Wed, 28 Jun 2017 07:28:50: 82000000 INFO @ Wed, 28 Jun 2017 07:28:51: 75000000 INFO @ Wed, 28 Jun 2017 07:28:57: 76000000 INFO @ Wed, 28 Jun 2017 07:28:59: 83000000 INFO @ Wed, 28 Jun 2017 07:29:00: 76000000 INFO @ Wed, 28 Jun 2017 07:29:05: 77000000 INFO @ Wed, 28 Jun 2017 07:29:08: 77000000 INFO @ Wed, 28 Jun 2017 07:29:09: 84000000 INFO @ Wed, 28 Jun 2017 07:29:13: 78000000 INFO @ Wed, 28 Jun 2017 07:29:16: 78000000 INFO @ Wed, 28 Jun 2017 07:29:18: 85000000 INFO @ Wed, 28 Jun 2017 07:29:21: 79000000 INFO @ Wed, 28 Jun 2017 07:29:24: 79000000 INFO @ Wed, 28 Jun 2017 07:29:26: 86000000 INFO @ Wed, 28 Jun 2017 07:29:29: 80000000 INFO @ Wed, 28 Jun 2017 07:29:32: 80000000 INFO @ Wed, 28 Jun 2017 07:29:36: 87000000 INFO @ Wed, 28 Jun 2017 07:29:37: 81000000 INFO @ Wed, 28 Jun 2017 07:29:40: 81000000 INFO @ Wed, 28 Jun 2017 07:29:44: 88000000 INFO @ Wed, 28 Jun 2017 07:29:44: 82000000 INFO @ Wed, 28 Jun 2017 07:29:48: 82000000 INFO @ Wed, 28 Jun 2017 07:29:52: 83000000 INFO @ Wed, 28 Jun 2017 07:29:53: 89000000 INFO @ Wed, 28 Jun 2017 07:29:56: 83000000 INFO @ Wed, 28 Jun 2017 07:30:00: 84000000 INFO @ Wed, 28 Jun 2017 07:30:02: 90000000 INFO @ Wed, 28 Jun 2017 07:30:04: 84000000 INFO @ Wed, 28 Jun 2017 07:30:08: 85000000 INFO @ Wed, 28 Jun 2017 07:30:11: 91000000 INFO @ Wed, 28 Jun 2017 07:30:12: 85000000 INFO @ Wed, 28 Jun 2017 07:30:16: 86000000 INFO @ Wed, 28 Jun 2017 07:30:20: 86000000 INFO @ Wed, 28 Jun 2017 07:30:20: 92000000 INFO @ Wed, 28 Jun 2017 07:30:24: 87000000 INFO @ Wed, 28 Jun 2017 07:30:28: 87000000 INFO @ Wed, 28 Jun 2017 07:30:29: 93000000 INFO @ Wed, 28 Jun 2017 07:30:32: 88000000 INFO @ Wed, 28 Jun 2017 07:30:36: 88000000 INFO @ Wed, 28 Jun 2017 07:30:38: 94000000 INFO @ Wed, 28 Jun 2017 07:30:40: 89000000 INFO @ Wed, 28 Jun 2017 07:30:44: 89000000 INFO @ Wed, 28 Jun 2017 07:30:47: 95000000 INFO @ Wed, 28 Jun 2017 07:30:48: 90000000 INFO @ Wed, 28 Jun 2017 07:30:52: 90000000 INFO @ Wed, 28 Jun 2017 07:30:56: 91000000 INFO @ Wed, 28 Jun 2017 07:30:56: 96000000 INFO @ Wed, 28 Jun 2017 07:31:00: 91000000 INFO @ Wed, 28 Jun 2017 07:31:04: 92000000 INFO @ Wed, 28 Jun 2017 07:31:05: 97000000 INFO @ Wed, 28 Jun 2017 07:31:08: 92000000 INFO @ Wed, 28 Jun 2017 07:31:12: 93000000 INFO @ Wed, 28 Jun 2017 07:31:14: 98000000 INFO @ Wed, 28 Jun 2017 07:31:16: 93000000 INFO @ Wed, 28 Jun 2017 07:31:19: 94000000 INFO @ Wed, 28 Jun 2017 07:31:23: 99000000 INFO @ Wed, 28 Jun 2017 07:31:24: 94000000 INFO @ Wed, 28 Jun 2017 07:31:27: 95000000 INFO @ Wed, 28 Jun 2017 07:31:32: 95000000 INFO @ Wed, 28 Jun 2017 07:31:32: 100000000 INFO @ Wed, 28 Jun 2017 07:31:35: 96000000 INFO @ Wed, 28 Jun 2017 07:31:40: 96000000 INFO @ Wed, 28 Jun 2017 07:31:41: 101000000 INFO @ Wed, 28 Jun 2017 07:31:43: 97000000 INFO @ Wed, 28 Jun 2017 07:31:45: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:31:45: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:31:45: #1 total tags in treatment: 49134886 INFO @ Wed, 28 Jun 2017 07:31:45: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:31:45: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:31:46: #1 tags after filtering in treatment: 15343040 INFO @ Wed, 28 Jun 2017 07:31:46: #1 Redundant rate of treatment: 0.69 INFO @ Wed, 28 Jun 2017 07:31:46: #1 finished! INFO @ Wed, 28 Jun 2017 07:31:46: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:31:46: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:31:47: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:31:47: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:31:47: Process for pairing-model is terminated! cat: SRX1631858.10_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631858.10_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631858.10_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631858.10_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 07:31:48: 97000000 INFO @ Wed, 28 Jun 2017 07:31:51: 98000000 INFO @ Wed, 28 Jun 2017 07:31:55: 98000000 INFO @ Wed, 28 Jun 2017 07:31:58: 99000000 INFO @ Wed, 28 Jun 2017 07:32:03: 99000000 INFO @ Wed, 28 Jun 2017 07:32:06: 100000000 INFO @ Wed, 28 Jun 2017 07:32:11: 100000000 INFO @ Wed, 28 Jun 2017 07:32:14: 101000000 INFO @ Wed, 28 Jun 2017 07:32:17: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:32:17: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:32:17: #1 total tags in treatment: 49134886 INFO @ Wed, 28 Jun 2017 07:32:17: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:32:17: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:32:18: #1 tags after filtering in treatment: 15343040 INFO @ Wed, 28 Jun 2017 07:32:18: #1 Redundant rate of treatment: 0.69 INFO @ Wed, 28 Jun 2017 07:32:18: #1 finished! INFO @ Wed, 28 Jun 2017 07:32:18: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:32:18: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:32:18: 101000000 INFO @ Wed, 28 Jun 2017 07:32:19: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:32:19: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:32:19: Process for pairing-model is terminated! cat: SRX1631858.05_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631858.05_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631858.05_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631858.05_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling INFO @ Wed, 28 Jun 2017 07:32:21: #1 tag size is determined as 50 bps INFO @ Wed, 28 Jun 2017 07:32:21: #1 tag size = 50 INFO @ Wed, 28 Jun 2017 07:32:21: #1 total tags in treatment: 49134886 INFO @ Wed, 28 Jun 2017 07:32:21: #1 user defined the maximum tags... INFO @ Wed, 28 Jun 2017 07:32:21: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Wed, 28 Jun 2017 07:32:23: #1 tags after filtering in treatment: 15343040 INFO @ Wed, 28 Jun 2017 07:32:23: #1 Redundant rate of treatment: 0.69 INFO @ Wed, 28 Jun 2017 07:32:23: #1 finished! INFO @ Wed, 28 Jun 2017 07:32:23: #2 Build Peak Model... INFO @ Wed, 28 Jun 2017 07:32:23: #2 looking for paired plus/minus strand peaks... INFO @ Wed, 28 Jun 2017 07:32:24: #2 number of paired peaks: 0 WARNING @ Wed, 28 Jun 2017 07:32:24: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Wed, 28 Jun 2017 07:32:24: Process for pairing-model is terminated! cat: SRX1631858.20_peaks.narrowPeak: そのようなファイルやディレクトリはありません pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove `SRX1631858.20_model.r': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631858.20_*.xls': そのようなファイルやディレクトリはありません rm: cannot remove `SRX1631858.20_peaks.narrowPeak': そのようなファイルやディレクトリはありません CompletedMACS2peakCalling