Job ID = 2009804 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-07-05T10:59:55 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:21:31 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:23:17 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:24:52 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:38:47 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 102,771,253 reads read : 205,542,506 reads written : 205,542,506 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:47:39 102771253 reads; of these: 102771253 (100.00%) were paired; of these: 40433618 (39.34%) aligned concordantly 0 times 47704122 (46.42%) aligned concordantly exactly 1 time 14633513 (14.24%) aligned concordantly >1 times ---- 40433618 pairs aligned concordantly 0 times; of these: 8173211 (20.21%) aligned discordantly 1 time ---- 32260407 pairs aligned 0 times concordantly or discordantly; of these: 64520814 mates make up the pairs; of these: 54344038 (84.23%) aligned 0 times 5004231 (7.76%) aligned exactly 1 time 5172545 (8.02%) aligned >1 times 73.56% overall alignment rate Time searching: 00:47:40 Overall time: 00:47:40 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 28768305 / 70445435 = 0.4084 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 22:17:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 22:17:15: #1 read tag files... INFO @ Fri, 05 Jul 2019 22:17:15: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 22:17:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 22:17:15: #1 read tag files... INFO @ Fri, 05 Jul 2019 22:17:15: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 22:17:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 22:17:15: #1 read tag files... INFO @ Fri, 05 Jul 2019 22:17:15: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 22:17:22: 1000000 INFO @ Fri, 05 Jul 2019 22:17:22: 1000000 INFO @ Fri, 05 Jul 2019 22:17:23: 1000000 INFO @ Fri, 05 Jul 2019 22:17:28: 2000000 INFO @ Fri, 05 Jul 2019 22:17:29: 2000000 INFO @ Fri, 05 Jul 2019 22:17:31: 2000000 INFO @ Fri, 05 Jul 2019 22:17:34: 3000000 INFO @ Fri, 05 Jul 2019 22:17:35: 3000000 INFO @ Fri, 05 Jul 2019 22:17:38: 3000000 INFO @ Fri, 05 Jul 2019 22:17:40: 4000000 INFO @ Fri, 05 Jul 2019 22:17:41: 4000000 INFO @ Fri, 05 Jul 2019 22:17:45: 5000000 INFO @ Fri, 05 Jul 2019 22:17:46: 4000000 INFO @ Fri, 05 Jul 2019 22:17:48: 5000000 INFO @ Fri, 05 Jul 2019 22:17:51: 6000000 INFO @ Fri, 05 Jul 2019 22:17:53: 5000000 INFO @ Fri, 05 Jul 2019 22:17:54: 6000000 INFO @ Fri, 05 Jul 2019 22:17:57: 7000000 INFO @ Fri, 05 Jul 2019 22:18:01: 7000000 INFO @ Fri, 05 Jul 2019 22:18:01: 6000000 INFO @ Fri, 05 Jul 2019 22:18:03: 8000000 INFO @ Fri, 05 Jul 2019 22:18:07: 8000000 INFO @ Fri, 05 Jul 2019 22:18:08: 9000000 INFO @ Fri, 05 Jul 2019 22:18:08: 7000000 INFO @ Fri, 05 Jul 2019 22:18:13: 9000000 INFO @ Fri, 05 Jul 2019 22:18:14: 10000000 INFO @ Fri, 05 Jul 2019 22:18:16: 8000000 INFO @ Fri, 05 Jul 2019 22:18:20: 11000000 INFO @ Fri, 05 Jul 2019 22:18:20: 10000000 INFO @ Fri, 05 Jul 2019 22:18:23: 9000000 INFO @ Fri, 05 Jul 2019 22:18:25: 12000000 INFO @ Fri, 05 Jul 2019 22:18:26: 11000000 INFO @ Fri, 05 Jul 2019 22:18:31: 13000000 INFO @ Fri, 05 Jul 2019 22:18:31: 10000000 INFO @ Fri, 05 Jul 2019 22:18:32: 12000000 INFO @ Fri, 05 Jul 2019 22:18:36: 14000000 INFO @ Fri, 05 Jul 2019 22:18:38: 11000000 INFO @ Fri, 05 Jul 2019 22:18:38: 13000000 INFO @ Fri, 05 Jul 2019 22:18:42: 15000000 INFO @ Fri, 05 Jul 2019 22:18:44: 14000000 INFO @ Fri, 05 Jul 2019 22:18:45: 12000000 INFO @ Fri, 05 Jul 2019 22:18:48: 16000000 INFO @ Fri, 05 Jul 2019 22:18:51: 15000000 INFO @ Fri, 05 Jul 2019 22:18:52: 13000000 INFO @ Fri, 05 Jul 2019 22:18:54: 17000000 INFO @ Fri, 05 Jul 2019 22:18:57: 16000000 INFO @ Fri, 05 Jul 2019 22:18:59: 18000000 INFO @ Fri, 05 Jul 2019 22:19:00: 14000000 INFO @ Fri, 05 Jul 2019 22:19:03: 17000000 INFO @ Fri, 05 Jul 2019 22:19:05: 19000000 INFO @ Fri, 05 Jul 2019 22:19:07: 15000000 INFO @ Fri, 05 Jul 2019 22:19:09: 18000000 INFO @ Fri, 05 Jul 2019 22:19:11: 20000000 INFO @ Fri, 05 Jul 2019 22:19:14: 16000000 INFO @ Fri, 05 Jul 2019 22:19:16: 19000000 INFO @ Fri, 05 Jul 2019 22:19:17: 21000000 INFO @ Fri, 05 Jul 2019 22:19:21: 17000000 INFO @ Fri, 05 Jul 2019 22:19:22: 20000000 INFO @ Fri, 05 Jul 2019 22:19:22: 22000000 INFO @ Fri, 05 Jul 2019 22:19:28: 23000000 INFO @ Fri, 05 Jul 2019 22:19:28: 21000000 INFO @ Fri, 05 Jul 2019 22:19:29: 18000000 INFO @ Fri, 05 Jul 2019 22:19:33: 24000000 INFO @ Fri, 05 Jul 2019 22:19:34: 22000000 INFO @ Fri, 05 Jul 2019 22:19:36: 19000000 INFO @ Fri, 05 Jul 2019 22:19:39: 25000000 INFO @ Fri, 05 Jul 2019 22:19:40: 23000000 INFO @ Fri, 05 Jul 2019 22:19:43: 20000000 INFO @ Fri, 05 Jul 2019 22:19:44: 26000000 INFO @ Fri, 05 Jul 2019 22:19:46: 24000000 INFO @ Fri, 05 Jul 2019 22:19:50: 27000000 INFO @ Fri, 05 Jul 2019 22:19:50: 21000000 INFO @ Fri, 05 Jul 2019 22:19:52: 25000000 INFO @ Fri, 05 Jul 2019 22:19:55: 28000000 INFO @ Fri, 05 Jul 2019 22:19:57: 22000000 INFO @ Fri, 05 Jul 2019 22:19:58: 26000000 INFO @ Fri, 05 Jul 2019 22:20:01: 29000000 INFO @ Fri, 05 Jul 2019 22:20:04: 23000000 INFO @ Fri, 05 Jul 2019 22:20:04: 27000000 INFO @ Fri, 05 Jul 2019 22:20:06: 30000000 INFO @ Fri, 05 Jul 2019 22:20:10: 28000000 INFO @ Fri, 05 Jul 2019 22:20:11: 24000000 INFO @ Fri, 05 Jul 2019 22:20:12: 31000000 INFO @ Fri, 05 Jul 2019 22:20:16: 29000000 INFO @ Fri, 05 Jul 2019 22:20:17: 32000000 INFO @ Fri, 05 Jul 2019 22:20:18: 25000000 INFO @ Fri, 05 Jul 2019 22:20:22: 30000000 INFO @ Fri, 05 Jul 2019 22:20:23: 33000000 INFO @ Fri, 05 Jul 2019 22:20:25: 26000000 INFO @ Fri, 05 Jul 2019 22:20:28: 34000000 INFO @ Fri, 05 Jul 2019 22:20:28: 31000000 INFO @ Fri, 05 Jul 2019 22:20:32: 27000000 INFO @ Fri, 05 Jul 2019 22:20:34: 35000000 INFO @ Fri, 05 Jul 2019 22:20:35: 32000000 INFO @ Fri, 05 Jul 2019 22:20:39: 28000000 INFO @ Fri, 05 Jul 2019 22:20:40: 36000000 INFO @ Fri, 05 Jul 2019 22:20:41: 33000000 INFO @ Fri, 05 Jul 2019 22:20:46: 37000000 INFO @ Fri, 05 Jul 2019 22:20:46: 29000000 INFO @ Fri, 05 Jul 2019 22:20:47: 34000000 INFO @ Fri, 05 Jul 2019 22:20:52: 38000000 INFO @ Fri, 05 Jul 2019 22:20:53: 35000000 INFO @ Fri, 05 Jul 2019 22:20:53: 30000000 INFO @ Fri, 05 Jul 2019 22:20:57: 39000000 INFO @ Fri, 05 Jul 2019 22:20:59: 36000000 INFO @ Fri, 05 Jul 2019 22:21:00: 31000000 INFO @ Fri, 05 Jul 2019 22:21:03: 40000000 INFO @ Fri, 05 Jul 2019 22:21:06: 37000000 INFO @ Fri, 05 Jul 2019 22:21:07: 32000000 INFO @ Fri, 05 Jul 2019 22:21:09: 41000000 INFO @ Fri, 05 Jul 2019 22:21:12: 38000000 INFO @ Fri, 05 Jul 2019 22:21:14: 33000000 INFO @ Fri, 05 Jul 2019 22:21:15: 42000000 INFO @ Fri, 05 Jul 2019 22:21:19: 39000000 INFO @ Fri, 05 Jul 2019 22:21:20: 43000000 INFO @ Fri, 05 Jul 2019 22:21:22: 34000000 INFO @ Fri, 05 Jul 2019 22:21:25: 40000000 INFO @ Fri, 05 Jul 2019 22:21:26: 44000000 INFO @ Fri, 05 Jul 2019 22:21:29: 35000000 INFO @ Fri, 05 Jul 2019 22:21:31: 41000000 INFO @ Fri, 05 Jul 2019 22:21:32: 45000000 INFO @ Fri, 05 Jul 2019 22:21:36: 36000000 INFO @ Fri, 05 Jul 2019 22:21:37: 42000000 INFO @ Fri, 05 Jul 2019 22:21:37: 46000000 INFO @ Fri, 05 Jul 2019 22:21:43: 47000000 INFO @ Fri, 05 Jul 2019 22:21:43: 43000000 INFO @ Fri, 05 Jul 2019 22:21:44: 37000000 INFO @ Fri, 05 Jul 2019 22:21:48: 48000000 INFO @ Fri, 05 Jul 2019 22:21:49: 44000000 INFO @ Fri, 05 Jul 2019 22:21:51: 38000000 INFO @ Fri, 05 Jul 2019 22:21:54: 49000000 INFO @ Fri, 05 Jul 2019 22:21:55: 45000000 INFO @ Fri, 05 Jul 2019 22:21:58: 39000000 INFO @ Fri, 05 Jul 2019 22:22:00: 50000000 INFO @ Fri, 05 Jul 2019 22:22:01: 46000000 INFO @ Fri, 05 Jul 2019 22:22:06: 40000000 INFO @ Fri, 05 Jul 2019 22:22:06: 51000000 INFO @ Fri, 05 Jul 2019 22:22:07: 47000000 INFO @ Fri, 05 Jul 2019 22:22:11: 52000000 INFO @ Fri, 05 Jul 2019 22:22:13: 41000000 INFO @ Fri, 05 Jul 2019 22:22:14: 48000000 INFO @ Fri, 05 Jul 2019 22:22:17: 53000000 INFO @ Fri, 05 Jul 2019 22:22:20: 42000000 INFO @ Fri, 05 Jul 2019 22:22:20: 49000000 INFO @ Fri, 05 Jul 2019 22:22:23: 54000000 INFO @ Fri, 05 Jul 2019 22:22:26: 50000000 INFO @ Fri, 05 Jul 2019 22:22:27: 43000000 INFO @ Fri, 05 Jul 2019 22:22:29: 55000000 INFO @ Fri, 05 Jul 2019 22:22:32: 51000000 INFO @ Fri, 05 Jul 2019 22:22:34: 44000000 INFO @ Fri, 05 Jul 2019 22:22:35: 56000000 INFO @ Fri, 05 Jul 2019 22:22:38: 52000000 INFO @ Fri, 05 Jul 2019 22:22:40: 57000000 INFO @ Fri, 05 Jul 2019 22:22:41: 45000000 INFO @ Fri, 05 Jul 2019 22:22:45: 53000000 INFO @ Fri, 05 Jul 2019 22:22:46: 58000000 INFO @ Fri, 05 Jul 2019 22:22:48: 46000000 INFO @ Fri, 05 Jul 2019 22:22:51: 54000000 INFO @ Fri, 05 Jul 2019 22:22:51: 59000000 INFO @ Fri, 05 Jul 2019 22:22:55: 47000000 INFO @ Fri, 05 Jul 2019 22:22:57: 60000000 INFO @ Fri, 05 Jul 2019 22:22:57: 55000000 INFO @ Fri, 05 Jul 2019 22:23:02: 48000000 INFO @ Fri, 05 Jul 2019 22:23:02: 61000000 INFO @ Fri, 05 Jul 2019 22:23:03: 56000000 INFO @ Fri, 05 Jul 2019 22:23:08: 62000000 INFO @ Fri, 05 Jul 2019 22:23:09: 49000000 INFO @ Fri, 05 Jul 2019 22:23:09: 57000000 INFO @ Fri, 05 Jul 2019 22:23:13: 63000000 INFO @ Fri, 05 Jul 2019 22:23:15: 58000000 INFO @ Fri, 05 Jul 2019 22:23:16: 50000000 INFO @ Fri, 05 Jul 2019 22:23:19: 64000000 INFO @ Fri, 05 Jul 2019 22:23:21: 59000000 INFO @ Fri, 05 Jul 2019 22:23:23: 51000000 INFO @ Fri, 05 Jul 2019 22:23:24: 65000000 INFO @ Fri, 05 Jul 2019 22:23:27: 60000000 INFO @ Fri, 05 Jul 2019 22:23:30: 66000000 INFO @ Fri, 05 Jul 2019 22:23:30: 52000000 INFO @ Fri, 05 Jul 2019 22:23:33: 61000000 INFO @ Fri, 05 Jul 2019 22:23:36: 67000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 05 Jul 2019 22:23:38: 53000000 INFO @ Fri, 05 Jul 2019 22:23:39: 62000000 INFO @ Fri, 05 Jul 2019 22:23:42: 68000000 INFO @ Fri, 05 Jul 2019 22:23:45: 54000000 INFO @ Fri, 05 Jul 2019 22:23:45: 63000000 INFO @ Fri, 05 Jul 2019 22:23:48: 69000000 INFO @ Fri, 05 Jul 2019 22:23:52: 64000000 INFO @ Fri, 05 Jul 2019 22:23:53: 55000000 INFO @ Fri, 05 Jul 2019 22:23:54: 70000000 INFO @ Fri, 05 Jul 2019 22:23:58: 65000000 INFO @ Fri, 05 Jul 2019 22:23:59: 71000000 INFO @ Fri, 05 Jul 2019 22:24:00: 56000000 BigWig に変換しました。 INFO @ Fri, 05 Jul 2019 22:24:04: 66000000 INFO @ Fri, 05 Jul 2019 22:24:05: 72000000 INFO @ Fri, 05 Jul 2019 22:24:07: 57000000 INFO @ Fri, 05 Jul 2019 22:24:10: 67000000 INFO @ Fri, 05 Jul 2019 22:24:11: 73000000 INFO @ Fri, 05 Jul 2019 22:24:14: 58000000 INFO @ Fri, 05 Jul 2019 22:24:16: 68000000 INFO @ Fri, 05 Jul 2019 22:24:17: 74000000 INFO @ Fri, 05 Jul 2019 22:24:21: 59000000 INFO @ Fri, 05 Jul 2019 22:24:23: 75000000 INFO @ Fri, 05 Jul 2019 22:24:23: 69000000 INFO @ Fri, 05 Jul 2019 22:24:28: 60000000 INFO @ Fri, 05 Jul 2019 22:24:29: 76000000 INFO @ Fri, 05 Jul 2019 22:24:29: 70000000 INFO @ Fri, 05 Jul 2019 22:24:34: 77000000 INFO @ Fri, 05 Jul 2019 22:24:35: 61000000 INFO @ Fri, 05 Jul 2019 22:24:36: 71000000 INFO @ Fri, 05 Jul 2019 22:24:40: 78000000 INFO @ Fri, 05 Jul 2019 22:24:42: 62000000 INFO @ Fri, 05 Jul 2019 22:24:42: 72000000 INFO @ Fri, 05 Jul 2019 22:24:46: 79000000 INFO @ Fri, 05 Jul 2019 22:24:49: 73000000 INFO @ Fri, 05 Jul 2019 22:24:49: 63000000 INFO @ Fri, 05 Jul 2019 22:24:52: 80000000 INFO @ Fri, 05 Jul 2019 22:24:55: 74000000 INFO @ Fri, 05 Jul 2019 22:24:57: 64000000 INFO @ Fri, 05 Jul 2019 22:24:58: 81000000 INFO @ Fri, 05 Jul 2019 22:25:01: 75000000 INFO @ Fri, 05 Jul 2019 22:25:03: 82000000 INFO @ Fri, 05 Jul 2019 22:25:04: 65000000 INFO @ Fri, 05 Jul 2019 22:25:07: 76000000 INFO @ Fri, 05 Jul 2019 22:25:09: 83000000 INFO @ Fri, 05 Jul 2019 22:25:11: 66000000 INFO @ Fri, 05 Jul 2019 22:25:14: 77000000 INFO @ Fri, 05 Jul 2019 22:25:15: 84000000 INFO @ Fri, 05 Jul 2019 22:25:18: 67000000 INFO @ Fri, 05 Jul 2019 22:25:20: 78000000 INFO @ Fri, 05 Jul 2019 22:25:20: 85000000 INFO @ Fri, 05 Jul 2019 22:25:25: 68000000 INFO @ Fri, 05 Jul 2019 22:25:26: 79000000 INFO @ Fri, 05 Jul 2019 22:25:26: 86000000 INFO @ Fri, 05 Jul 2019 22:25:32: 87000000 INFO @ Fri, 05 Jul 2019 22:25:32: 80000000 INFO @ Fri, 05 Jul 2019 22:25:32: 69000000 INFO @ Fri, 05 Jul 2019 22:25:37: 88000000 INFO @ Fri, 05 Jul 2019 22:25:38: 81000000 INFO @ Fri, 05 Jul 2019 22:25:40: 70000000 INFO @ Fri, 05 Jul 2019 22:25:43: 89000000 INFO @ Fri, 05 Jul 2019 22:25:44: 82000000 INFO @ Fri, 05 Jul 2019 22:25:47: 71000000 INFO @ Fri, 05 Jul 2019 22:25:48: 90000000 INFO @ Fri, 05 Jul 2019 22:25:51: 83000000 INFO @ Fri, 05 Jul 2019 22:25:54: 91000000 INFO @ Fri, 05 Jul 2019 22:25:54: 72000000 INFO @ Fri, 05 Jul 2019 22:25:57: 84000000 INFO @ Fri, 05 Jul 2019 22:26:00: 92000000 INFO @ Fri, 05 Jul 2019 22:26:01: 73000000 INFO @ Fri, 05 Jul 2019 22:26:03: 85000000 INFO @ Fri, 05 Jul 2019 22:26:05: 93000000 INFO @ Fri, 05 Jul 2019 22:26:08: 74000000 INFO @ Fri, 05 Jul 2019 22:26:09: 86000000 INFO @ Fri, 05 Jul 2019 22:26:09: #1 tag size is determined as 25 bps INFO @ Fri, 05 Jul 2019 22:26:09: #1 tag size = 25 INFO @ Fri, 05 Jul 2019 22:26:09: #1 total tags in treatment: 35201687 INFO @ Fri, 05 Jul 2019 22:26:09: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 22:26:09: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 22:26:10: #1 tags after filtering in treatment: 11669700 INFO @ Fri, 05 Jul 2019 22:26:10: #1 Redundant rate of treatment: 0.67 INFO @ Fri, 05 Jul 2019 22:26:10: #1 finished! INFO @ Fri, 05 Jul 2019 22:26:10: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 22:26:10: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 22:26:11: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 22:26:11: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 22:26:11: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 22:26:15: 87000000 INFO @ Fri, 05 Jul 2019 22:26:16: 75000000 INFO @ Fri, 05 Jul 2019 22:26:22: 88000000 INFO @ Fri, 05 Jul 2019 22:26:23: 76000000 INFO @ Fri, 05 Jul 2019 22:26:28: 89000000 INFO @ Fri, 05 Jul 2019 22:26:30: 77000000 INFO @ Fri, 05 Jul 2019 22:26:34: 90000000 INFO @ Fri, 05 Jul 2019 22:26:37: 78000000 INFO @ Fri, 05 Jul 2019 22:26:40: 91000000 INFO @ Fri, 05 Jul 2019 22:26:44: 79000000 INFO @ Fri, 05 Jul 2019 22:26:46: 92000000 INFO @ Fri, 05 Jul 2019 22:26:52: 80000000 INFO @ Fri, 05 Jul 2019 22:26:52: 93000000 INFO @ Fri, 05 Jul 2019 22:26:57: #1 tag size is determined as 25 bps INFO @ Fri, 05 Jul 2019 22:26:57: #1 tag size = 25 INFO @ Fri, 05 Jul 2019 22:26:57: #1 total tags in treatment: 35201687 INFO @ Fri, 05 Jul 2019 22:26:57: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 22:26:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 22:26:58: #1 tags after filtering in treatment: 11669700 INFO @ Fri, 05 Jul 2019 22:26:58: #1 Redundant rate of treatment: 0.67 INFO @ Fri, 05 Jul 2019 22:26:58: #1 finished! INFO @ Fri, 05 Jul 2019 22:26:58: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 22:26:58: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 22:26:59: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 22:26:59: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 22:26:59: Process for pairing-model is terminated! INFO @ Fri, 05 Jul 2019 22:26:59: 81000000 cut: /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 22:27:06: 82000000 INFO @ Fri, 05 Jul 2019 22:27:12: 83000000 INFO @ Fri, 05 Jul 2019 22:27:20: 84000000 INFO @ Fri, 05 Jul 2019 22:27:27: 85000000 INFO @ Fri, 05 Jul 2019 22:27:33: 86000000 INFO @ Fri, 05 Jul 2019 22:27:40: 87000000 INFO @ Fri, 05 Jul 2019 22:27:47: 88000000 INFO @ Fri, 05 Jul 2019 22:27:54: 89000000 INFO @ Fri, 05 Jul 2019 22:28:01: 90000000 INFO @ Fri, 05 Jul 2019 22:28:08: 91000000 INFO @ Fri, 05 Jul 2019 22:28:15: 92000000 INFO @ Fri, 05 Jul 2019 22:28:22: 93000000 INFO @ Fri, 05 Jul 2019 22:28:27: #1 tag size is determined as 25 bps INFO @ Fri, 05 Jul 2019 22:28:27: #1 tag size = 25 INFO @ Fri, 05 Jul 2019 22:28:27: #1 total tags in treatment: 35201687 INFO @ Fri, 05 Jul 2019 22:28:27: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 22:28:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 22:28:28: #1 tags after filtering in treatment: 11669700 INFO @ Fri, 05 Jul 2019 22:28:28: #1 Redundant rate of treatment: 0.67 INFO @ Fri, 05 Jul 2019 22:28:28: #1 finished! INFO @ Fri, 05 Jul 2019 22:28:28: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 22:28:28: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 22:28:29: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 22:28:29: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 22:28:29: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160485/SRX160485.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling