Job ID = 2009802 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-07-05T10:56:19 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:10:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:10:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:19:09 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:25:12 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:27:15 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:34:11 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:39:09 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:43:48 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:48:48 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:48:51 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T11:50:53 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 113,173,283 reads read : 226,346,566 reads written : 226,346,566 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:44:33 113173283 reads; of these: 113173283 (100.00%) were paired; of these: 53244646 (47.05%) aligned concordantly 0 times 49383476 (43.64%) aligned concordantly exactly 1 time 10545161 (9.32%) aligned concordantly >1 times ---- 53244646 pairs aligned concordantly 0 times; of these: 11452436 (21.51%) aligned discordantly 1 time ---- 41792210 pairs aligned 0 times concordantly or discordantly; of these: 83584420 mates make up the pairs; of these: 74072808 (88.62%) aligned 0 times 4259523 (5.10%) aligned exactly 1 time 5252089 (6.28%) aligned >1 times 67.27% overall alignment rate Time searching: 00:44:33 Overall time: 00:44:33 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 29401038 / 71326278 = 0.4122 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 22:28:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 22:28:47: #1 read tag files... INFO @ Fri, 05 Jul 2019 22:28:47: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 22:28:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 22:28:48: #1 read tag files... INFO @ Fri, 05 Jul 2019 22:28:48: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 22:28:49: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 22:28:49: #1 read tag files... INFO @ Fri, 05 Jul 2019 22:28:49: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 22:28:53: 1000000 INFO @ Fri, 05 Jul 2019 22:28:54: 1000000 INFO @ Fri, 05 Jul 2019 22:28:55: 1000000 INFO @ Fri, 05 Jul 2019 22:28:59: 2000000 INFO @ Fri, 05 Jul 2019 22:28:59: 2000000 INFO @ Fri, 05 Jul 2019 22:29:01: 2000000 INFO @ Fri, 05 Jul 2019 22:29:04: 3000000 INFO @ Fri, 05 Jul 2019 22:29:06: 3000000 INFO @ Fri, 05 Jul 2019 22:29:06: 3000000 INFO @ Fri, 05 Jul 2019 22:29:10: 4000000 INFO @ Fri, 05 Jul 2019 22:29:12: 4000000 INFO @ Fri, 05 Jul 2019 22:29:12: 4000000 INFO @ Fri, 05 Jul 2019 22:29:15: 5000000 INFO @ Fri, 05 Jul 2019 22:29:18: 5000000 INFO @ Fri, 05 Jul 2019 22:29:18: 5000000 INFO @ Fri, 05 Jul 2019 22:29:20: 6000000 INFO @ Fri, 05 Jul 2019 22:29:24: 6000000 INFO @ Fri, 05 Jul 2019 22:29:24: 6000000 INFO @ Fri, 05 Jul 2019 22:29:26: 7000000 INFO @ Fri, 05 Jul 2019 22:29:30: 7000000 INFO @ Fri, 05 Jul 2019 22:29:31: 7000000 INFO @ Fri, 05 Jul 2019 22:29:31: 8000000 INFO @ Fri, 05 Jul 2019 22:29:36: 8000000 INFO @ Fri, 05 Jul 2019 22:29:36: 9000000 INFO @ Fri, 05 Jul 2019 22:29:37: 8000000 INFO @ Fri, 05 Jul 2019 22:29:42: 10000000 INFO @ Fri, 05 Jul 2019 22:29:42: 9000000 INFO @ Fri, 05 Jul 2019 22:29:43: 9000000 INFO @ Fri, 05 Jul 2019 22:29:47: 11000000 INFO @ Fri, 05 Jul 2019 22:29:48: 10000000 INFO @ Fri, 05 Jul 2019 22:29:50: 10000000 INFO @ Fri, 05 Jul 2019 22:29:52: 12000000 INFO @ Fri, 05 Jul 2019 22:29:54: 11000000 INFO @ Fri, 05 Jul 2019 22:29:56: 11000000 INFO @ Fri, 05 Jul 2019 22:29:57: 13000000 INFO @ Fri, 05 Jul 2019 22:30:00: 12000000 INFO @ Fri, 05 Jul 2019 22:30:02: 12000000 INFO @ Fri, 05 Jul 2019 22:30:03: 14000000 INFO @ Fri, 05 Jul 2019 22:30:05: 13000000 INFO @ Fri, 05 Jul 2019 22:30:08: 13000000 INFO @ Fri, 05 Jul 2019 22:30:08: 15000000 INFO @ Fri, 05 Jul 2019 22:30:11: 14000000 INFO @ Fri, 05 Jul 2019 22:30:13: 16000000 INFO @ Fri, 05 Jul 2019 22:30:14: 14000000 INFO @ Fri, 05 Jul 2019 22:30:17: 15000000 INFO @ Fri, 05 Jul 2019 22:30:19: 17000000 INFO @ Fri, 05 Jul 2019 22:30:20: 15000000 INFO @ Fri, 05 Jul 2019 22:30:22: 16000000 INFO @ Fri, 05 Jul 2019 22:30:24: 18000000 INFO @ Fri, 05 Jul 2019 22:30:25: 16000000 INFO @ Fri, 05 Jul 2019 22:30:28: 17000000 INFO @ Fri, 05 Jul 2019 22:30:29: 19000000 INFO @ Fri, 05 Jul 2019 22:30:31: 17000000 INFO @ Fri, 05 Jul 2019 22:30:34: 18000000 INFO @ Fri, 05 Jul 2019 22:30:34: 20000000 INFO @ Fri, 05 Jul 2019 22:30:37: 18000000 INFO @ Fri, 05 Jul 2019 22:30:39: 19000000 INFO @ Fri, 05 Jul 2019 22:30:40: 21000000 INFO @ Fri, 05 Jul 2019 22:30:43: 19000000 INFO @ Fri, 05 Jul 2019 22:30:45: 22000000 INFO @ Fri, 05 Jul 2019 22:30:45: 20000000 INFO @ Fri, 05 Jul 2019 22:30:49: 20000000 INFO @ Fri, 05 Jul 2019 22:30:50: 23000000 INFO @ Fri, 05 Jul 2019 22:30:50: 21000000 INFO @ Fri, 05 Jul 2019 22:30:55: 21000000 INFO @ Fri, 05 Jul 2019 22:30:55: 24000000 INFO @ Fri, 05 Jul 2019 22:30:56: 22000000 INFO @ Fri, 05 Jul 2019 22:31:00: 25000000 INFO @ Fri, 05 Jul 2019 22:31:01: 22000000 INFO @ Fri, 05 Jul 2019 22:31:01: 23000000 INFO @ Fri, 05 Jul 2019 22:31:05: 26000000 INFO @ Fri, 05 Jul 2019 22:31:06: 23000000 INFO @ Fri, 05 Jul 2019 22:31:07: 24000000 INFO @ Fri, 05 Jul 2019 22:31:11: 27000000 INFO @ Fri, 05 Jul 2019 22:31:12: 24000000 INFO @ Fri, 05 Jul 2019 22:31:13: 25000000 INFO @ Fri, 05 Jul 2019 22:31:16: 28000000 INFO @ Fri, 05 Jul 2019 22:31:18: 25000000 INFO @ Fri, 05 Jul 2019 22:31:18: 26000000 INFO @ Fri, 05 Jul 2019 22:31:21: 29000000 INFO @ Fri, 05 Jul 2019 22:31:24: 26000000 INFO @ Fri, 05 Jul 2019 22:31:24: 27000000 INFO @ Fri, 05 Jul 2019 22:31:26: 30000000 INFO @ Fri, 05 Jul 2019 22:31:29: 28000000 INFO @ Fri, 05 Jul 2019 22:31:29: 27000000 INFO @ Fri, 05 Jul 2019 22:31:31: 31000000 INFO @ Fri, 05 Jul 2019 22:31:35: 29000000 INFO @ Fri, 05 Jul 2019 22:31:35: 28000000 INFO @ Fri, 05 Jul 2019 22:31:36: 32000000 INFO @ Fri, 05 Jul 2019 22:31:41: 30000000 INFO @ Fri, 05 Jul 2019 22:31:41: 29000000 INFO @ Fri, 05 Jul 2019 22:31:42: 33000000 INFO @ Fri, 05 Jul 2019 22:31:46: 31000000 INFO @ Fri, 05 Jul 2019 22:31:47: 34000000 INFO @ Fri, 05 Jul 2019 22:31:47: 30000000 INFO @ Fri, 05 Jul 2019 22:31:52: 35000000 INFO @ Fri, 05 Jul 2019 22:31:52: 32000000 INFO @ Fri, 05 Jul 2019 22:31:53: 31000000 INFO @ Fri, 05 Jul 2019 22:31:57: 36000000 INFO @ Fri, 05 Jul 2019 22:31:57: 33000000 INFO @ Fri, 05 Jul 2019 22:31:58: 32000000 INFO @ Fri, 05 Jul 2019 22:32:02: 37000000 INFO @ Fri, 05 Jul 2019 22:32:03: 34000000 INFO @ Fri, 05 Jul 2019 22:32:04: 33000000 INFO @ Fri, 05 Jul 2019 22:32:07: 38000000 INFO @ Fri, 05 Jul 2019 22:32:09: 35000000 INFO @ Fri, 05 Jul 2019 22:32:10: 34000000 INFO @ Fri, 05 Jul 2019 22:32:13: 39000000 INFO @ Fri, 05 Jul 2019 22:32:14: 36000000 INFO @ Fri, 05 Jul 2019 22:32:16: 35000000 INFO @ Fri, 05 Jul 2019 22:32:18: 40000000 INFO @ Fri, 05 Jul 2019 22:32:20: 37000000 INFO @ Fri, 05 Jul 2019 22:32:22: 36000000 INFO @ Fri, 05 Jul 2019 22:32:23: 41000000 INFO @ Fri, 05 Jul 2019 22:32:25: 38000000 INFO @ Fri, 05 Jul 2019 22:32:27: 37000000 INFO @ Fri, 05 Jul 2019 22:32:28: 42000000 INFO @ Fri, 05 Jul 2019 22:32:31: 39000000 INFO @ Fri, 05 Jul 2019 22:32:33: 38000000 INFO @ Fri, 05 Jul 2019 22:32:35: 43000000 INFO @ Fri, 05 Jul 2019 22:32:36: 40000000 INFO @ Fri, 05 Jul 2019 22:32:39: 39000000 INFO @ Fri, 05 Jul 2019 22:32:41: 44000000 INFO @ Fri, 05 Jul 2019 22:32:42: 41000000 INFO @ Fri, 05 Jul 2019 22:32:45: 40000000 INFO @ Fri, 05 Jul 2019 22:32:47: 45000000 INFO @ Fri, 05 Jul 2019 22:32:48: 42000000 INFO @ Fri, 05 Jul 2019 22:32:50: 41000000 INFO @ Fri, 05 Jul 2019 22:32:53: 46000000 INFO @ Fri, 05 Jul 2019 22:32:55: 43000000 INFO @ Fri, 05 Jul 2019 22:32:56: 42000000 INFO @ Fri, 05 Jul 2019 22:32:58: 47000000 INFO @ Fri, 05 Jul 2019 22:33:01: 44000000 INFO @ Fri, 05 Jul 2019 22:33:02: 43000000 INFO @ Fri, 05 Jul 2019 22:33:03: 48000000 INFO @ Fri, 05 Jul 2019 22:33:08: 45000000 INFO @ Fri, 05 Jul 2019 22:33:08: 49000000 INFO @ Fri, 05 Jul 2019 22:33:09: 44000000 INFO @ Fri, 05 Jul 2019 22:33:13: 50000000 INFO @ Fri, 05 Jul 2019 22:33:13: 46000000 INFO @ Fri, 05 Jul 2019 22:33:15: 45000000 INFO @ Fri, 05 Jul 2019 22:33:19: 51000000 INFO @ Fri, 05 Jul 2019 22:33:19: 47000000 INFO @ Fri, 05 Jul 2019 22:33:21: 46000000 INFO @ Fri, 05 Jul 2019 22:33:24: 52000000 INFO @ Fri, 05 Jul 2019 22:33:25: 48000000 INFO @ Fri, 05 Jul 2019 22:33:26: 47000000 INFO @ Fri, 05 Jul 2019 22:33:29: 53000000 INFO @ Fri, 05 Jul 2019 22:33:30: 49000000 INFO @ Fri, 05 Jul 2019 22:33:32: 48000000 INFO @ Fri, 05 Jul 2019 22:33:34: 54000000 INFO @ Fri, 05 Jul 2019 22:33:36: 50000000 INFO @ Fri, 05 Jul 2019 22:33:38: 49000000 INFO @ Fri, 05 Jul 2019 22:33:39: 55000000 INFO @ Fri, 05 Jul 2019 22:33:42: 51000000 INFO @ Fri, 05 Jul 2019 22:33:43: 50000000 INFO @ Fri, 05 Jul 2019 22:33:44: 56000000 INFO @ Fri, 05 Jul 2019 22:33:47: 52000000 INFO @ Fri, 05 Jul 2019 22:33:49: 51000000 INFO @ Fri, 05 Jul 2019 22:33:49: 57000000 INFO @ Fri, 05 Jul 2019 22:33:53: 53000000 INFO @ Fri, 05 Jul 2019 22:33:54: 58000000 INFO @ Fri, 05 Jul 2019 22:33:55: 52000000 INFO @ Fri, 05 Jul 2019 22:33:59: 54000000 INFO @ Fri, 05 Jul 2019 22:33:59: 59000000 INFO @ Fri, 05 Jul 2019 22:34:00: 53000000 INFO @ Fri, 05 Jul 2019 22:34:03: 60000000 INFO @ Fri, 05 Jul 2019 22:34:04: 55000000 INFO @ Fri, 05 Jul 2019 22:34:06: 54000000 INFO @ Fri, 05 Jul 2019 22:34:08: 61000000 INFO @ Fri, 05 Jul 2019 22:34:10: 56000000 INFO @ Fri, 05 Jul 2019 22:34:11: 55000000 INFO @ Fri, 05 Jul 2019 22:34:13: 62000000 INFO @ Fri, 05 Jul 2019 22:34:15: 57000000 INFO @ Fri, 05 Jul 2019 22:34:17: 56000000 INFO @ Fri, 05 Jul 2019 22:34:18: 63000000 INFO @ Fri, 05 Jul 2019 22:34:20: 58000000 INFO @ Fri, 05 Jul 2019 22:34:22: 57000000 INFO @ Fri, 05 Jul 2019 22:34:23: 64000000 INFO @ Fri, 05 Jul 2019 22:34:25: 59000000 INFO @ Fri, 05 Jul 2019 22:34:27: 58000000 INFO @ Fri, 05 Jul 2019 22:34:28: 65000000 INFO @ Fri, 05 Jul 2019 22:34:30: 60000000 INFO @ Fri, 05 Jul 2019 22:34:32: 59000000 INFO @ Fri, 05 Jul 2019 22:34:33: 66000000 INFO @ Fri, 05 Jul 2019 22:34:36: 61000000 INFO @ Fri, 05 Jul 2019 22:34:37: 60000000 INFO @ Fri, 05 Jul 2019 22:34:39: 67000000 INFO @ Fri, 05 Jul 2019 22:34:41: 62000000 INFO @ Fri, 05 Jul 2019 22:34:42: 61000000 INFO @ Fri, 05 Jul 2019 22:34:44: 68000000 INFO @ Fri, 05 Jul 2019 22:34:46: 63000000 INFO @ Fri, 05 Jul 2019 22:34:47: 62000000 INFO @ Fri, 05 Jul 2019 22:34:49: 69000000 INFO @ Fri, 05 Jul 2019 22:34:52: 64000000 INFO @ Fri, 05 Jul 2019 22:34:53: 63000000 INFO @ Fri, 05 Jul 2019 22:34:54: 70000000 INFO @ Fri, 05 Jul 2019 22:34:58: 65000000 INFO @ Fri, 05 Jul 2019 22:34:58: 64000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 05 Jul 2019 22:34:59: 71000000 INFO @ Fri, 05 Jul 2019 22:35:03: 66000000 INFO @ Fri, 05 Jul 2019 22:35:04: 65000000 INFO @ Fri, 05 Jul 2019 22:35:05: 72000000 INFO @ Fri, 05 Jul 2019 22:35:09: 67000000 INFO @ Fri, 05 Jul 2019 22:35:10: 66000000 INFO @ Fri, 05 Jul 2019 22:35:10: 73000000 INFO @ Fri, 05 Jul 2019 22:35:15: 68000000 INFO @ Fri, 05 Jul 2019 22:35:15: 74000000 INFO @ Fri, 05 Jul 2019 22:35:15: 67000000 INFO @ Fri, 05 Jul 2019 22:35:20: 75000000 INFO @ Fri, 05 Jul 2019 22:35:20: 69000000 INFO @ Fri, 05 Jul 2019 22:35:21: 68000000 INFO @ Fri, 05 Jul 2019 22:35:25: 76000000 INFO @ Fri, 05 Jul 2019 22:35:26: 70000000 INFO @ Fri, 05 Jul 2019 22:35:26: 69000000 INFO @ Fri, 05 Jul 2019 22:35:31: 77000000 BigWig に変換しました。 INFO @ Fri, 05 Jul 2019 22:35:32: 71000000 INFO @ Fri, 05 Jul 2019 22:35:32: 70000000 INFO @ Fri, 05 Jul 2019 22:35:36: 78000000 INFO @ Fri, 05 Jul 2019 22:35:38: 71000000 INFO @ Fri, 05 Jul 2019 22:35:38: 72000000 INFO @ Fri, 05 Jul 2019 22:35:41: 79000000 INFO @ Fri, 05 Jul 2019 22:35:43: 73000000 INFO @ Fri, 05 Jul 2019 22:35:44: 72000000 INFO @ Fri, 05 Jul 2019 22:35:47: 80000000 INFO @ Fri, 05 Jul 2019 22:35:49: 74000000 INFO @ Fri, 05 Jul 2019 22:35:49: 73000000 INFO @ Fri, 05 Jul 2019 22:35:52: 81000000 INFO @ Fri, 05 Jul 2019 22:35:55: 75000000 INFO @ Fri, 05 Jul 2019 22:35:55: 74000000 INFO @ Fri, 05 Jul 2019 22:35:57: 82000000 INFO @ Fri, 05 Jul 2019 22:36:00: 76000000 INFO @ Fri, 05 Jul 2019 22:36:01: 75000000 INFO @ Fri, 05 Jul 2019 22:36:02: 83000000 INFO @ Fri, 05 Jul 2019 22:36:06: 77000000 INFO @ Fri, 05 Jul 2019 22:36:06: 76000000 INFO @ Fri, 05 Jul 2019 22:36:07: 84000000 INFO @ Fri, 05 Jul 2019 22:36:11: 78000000 INFO @ Fri, 05 Jul 2019 22:36:12: 77000000 INFO @ Fri, 05 Jul 2019 22:36:13: 85000000 INFO @ Fri, 05 Jul 2019 22:36:17: 79000000 INFO @ Fri, 05 Jul 2019 22:36:17: 78000000 INFO @ Fri, 05 Jul 2019 22:36:18: 86000000 INFO @ Fri, 05 Jul 2019 22:36:23: 80000000 INFO @ Fri, 05 Jul 2019 22:36:23: 79000000 INFO @ Fri, 05 Jul 2019 22:36:23: 87000000 INFO @ Fri, 05 Jul 2019 22:36:28: 88000000 INFO @ Fri, 05 Jul 2019 22:36:28: 81000000 INFO @ Fri, 05 Jul 2019 22:36:29: 80000000 INFO @ Fri, 05 Jul 2019 22:36:34: 89000000 INFO @ Fri, 05 Jul 2019 22:36:34: 82000000 INFO @ Fri, 05 Jul 2019 22:36:34: 81000000 INFO @ Fri, 05 Jul 2019 22:36:39: 90000000 INFO @ Fri, 05 Jul 2019 22:36:39: 83000000 INFO @ Fri, 05 Jul 2019 22:36:40: 82000000 INFO @ Fri, 05 Jul 2019 22:36:44: 91000000 INFO @ Fri, 05 Jul 2019 22:36:45: 84000000 INFO @ Fri, 05 Jul 2019 22:36:45: 83000000 INFO @ Fri, 05 Jul 2019 22:36:49: 92000000 INFO @ Fri, 05 Jul 2019 22:36:51: 85000000 INFO @ Fri, 05 Jul 2019 22:36:51: 84000000 INFO @ Fri, 05 Jul 2019 22:36:54: 93000000 INFO @ Fri, 05 Jul 2019 22:36:56: 86000000 INFO @ Fri, 05 Jul 2019 22:36:56: 85000000 INFO @ Fri, 05 Jul 2019 22:36:57: #1 tag size is determined as 24 bps INFO @ Fri, 05 Jul 2019 22:36:57: #1 tag size = 24 INFO @ Fri, 05 Jul 2019 22:36:57: #1 total tags in treatment: 32995914 INFO @ Fri, 05 Jul 2019 22:36:57: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 22:36:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 22:36:58: #1 tags after filtering in treatment: 8808345 INFO @ Fri, 05 Jul 2019 22:36:58: #1 Redundant rate of treatment: 0.73 INFO @ Fri, 05 Jul 2019 22:36:58: #1 finished! INFO @ Fri, 05 Jul 2019 22:36:58: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 22:36:58: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 22:36:59: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 22:36:59: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 22:36:59: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 22:37:02: 87000000 INFO @ Fri, 05 Jul 2019 22:37:02: 86000000 INFO @ Fri, 05 Jul 2019 22:37:07: 88000000 INFO @ Fri, 05 Jul 2019 22:37:07: 87000000 INFO @ Fri, 05 Jul 2019 22:37:13: 89000000 INFO @ Fri, 05 Jul 2019 22:37:13: 88000000 INFO @ Fri, 05 Jul 2019 22:37:18: 90000000 INFO @ Fri, 05 Jul 2019 22:37:18: 89000000 INFO @ Fri, 05 Jul 2019 22:37:24: 91000000 INFO @ Fri, 05 Jul 2019 22:37:24: 90000000 INFO @ Fri, 05 Jul 2019 22:37:29: 92000000 INFO @ Fri, 05 Jul 2019 22:37:29: 91000000 INFO @ Fri, 05 Jul 2019 22:37:35: 93000000 INFO @ Fri, 05 Jul 2019 22:37:35: 92000000 INFO @ Fri, 05 Jul 2019 22:37:38: #1 tag size is determined as 24 bps INFO @ Fri, 05 Jul 2019 22:37:38: #1 tag size = 24 INFO @ Fri, 05 Jul 2019 22:37:38: #1 total tags in treatment: 32995914 INFO @ Fri, 05 Jul 2019 22:37:38: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 22:37:38: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 22:37:39: #1 tags after filtering in treatment: 8808345 INFO @ Fri, 05 Jul 2019 22:37:39: #1 Redundant rate of treatment: 0.73 INFO @ Fri, 05 Jul 2019 22:37:39: #1 finished! INFO @ Fri, 05 Jul 2019 22:37:39: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 22:37:39: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 22:37:40: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 22:37:40: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 22:37:40: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 22:37:40: 93000000 INFO @ Fri, 05 Jul 2019 22:37:43: #1 tag size is determined as 24 bps INFO @ Fri, 05 Jul 2019 22:37:43: #1 tag size = 24 INFO @ Fri, 05 Jul 2019 22:37:43: #1 total tags in treatment: 32995914 INFO @ Fri, 05 Jul 2019 22:37:43: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 22:37:43: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 22:37:44: #1 tags after filtering in treatment: 8808345 INFO @ Fri, 05 Jul 2019 22:37:44: #1 Redundant rate of treatment: 0.73 INFO @ Fri, 05 Jul 2019 22:37:44: #1 finished! INFO @ Fri, 05 Jul 2019 22:37:44: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 22:37:44: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 22:37:45: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 22:37:45: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 22:37:45: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 2 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160481/SRX160481.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling