Job ID = 2009800 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2019-07-05T11:24:52 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 86,389,810 reads read : 172,779,620 reads written : 172,779,620 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:51:47 86389810 reads; of these: 86389810 (100.00%) were paired; of these: 12168653 (14.09%) aligned concordantly 0 times 65811275 (76.18%) aligned concordantly exactly 1 time 8409882 (9.73%) aligned concordantly >1 times ---- 12168653 pairs aligned concordantly 0 times; of these: 5085370 (41.79%) aligned discordantly 1 time ---- 7083283 pairs aligned 0 times concordantly or discordantly; of these: 14166566 mates make up the pairs; of these: 10261942 (72.44%) aligned 0 times 2175868 (15.36%) aligned exactly 1 time 1728756 (12.20%) aligned >1 times 94.06% overall alignment rate Time searching: 00:51:47 Overall time: 00:51:47 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 17 sequences. [bam_sort_core] merging from 44 files... [bam_rmdup_core] processing reference chrI... [bam_rmdup_core] processing reference chrII... [bam_rmdup_core] processing reference chrIII... [bam_rmdup_core] processing reference chrIV... [bam_rmdup_core] processing reference chrIX... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrV... [bam_rmdup_core] processing reference chrVI... [bam_rmdup_core] processing reference chrVII... [bam_rmdup_core] processing reference chrVIII... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXI... [bam_rmdup_core] processing reference chrXII... [bam_rmdup_core] processing reference chrXIII... [bam_rmdup_core] processing reference chrXIV... [bam_rmdup_core] processing reference chrXV... [bam_rmdup_core] processing reference chrXVI... [bam_rmdup_core] 33612133 / 79263133 = 0.4241 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 21:58:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 21:58:15: #1 read tag files... INFO @ Fri, 05 Jul 2019 21:58:15: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 21:58:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 21:58:16: #1 read tag files... INFO @ Fri, 05 Jul 2019 21:58:16: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 21:58:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.bam -f BAM -g 12100000 -n /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.bam'] # control file = None # effective genome size = 1.21e+07 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 21:58:17: #1 read tag files... INFO @ Fri, 05 Jul 2019 21:58:17: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 21:58:20: 1000000 INFO @ Fri, 05 Jul 2019 21:58:22: 1000000 INFO @ Fri, 05 Jul 2019 21:58:23: 1000000 INFO @ Fri, 05 Jul 2019 21:58:25: 2000000 INFO @ Fri, 05 Jul 2019 21:58:29: 2000000 INFO @ Fri, 05 Jul 2019 21:58:30: 2000000 INFO @ Fri, 05 Jul 2019 21:58:31: 3000000 INFO @ Fri, 05 Jul 2019 21:58:36: 4000000 INFO @ Fri, 05 Jul 2019 21:58:37: 3000000 INFO @ Fri, 05 Jul 2019 21:58:37: 3000000 INFO @ Fri, 05 Jul 2019 21:58:41: 5000000 INFO @ Fri, 05 Jul 2019 21:58:44: 4000000 INFO @ Fri, 05 Jul 2019 21:58:44: 4000000 INFO @ Fri, 05 Jul 2019 21:58:46: 6000000 INFO @ Fri, 05 Jul 2019 21:58:51: 5000000 INFO @ Fri, 05 Jul 2019 21:58:51: 5000000 INFO @ Fri, 05 Jul 2019 21:58:52: 7000000 INFO @ Fri, 05 Jul 2019 21:58:57: 8000000 INFO @ Fri, 05 Jul 2019 21:58:58: 6000000 INFO @ Fri, 05 Jul 2019 21:58:58: 6000000 INFO @ Fri, 05 Jul 2019 21:59:02: 9000000 INFO @ Fri, 05 Jul 2019 21:59:05: 7000000 INFO @ Fri, 05 Jul 2019 21:59:05: 7000000 INFO @ Fri, 05 Jul 2019 21:59:07: 10000000 INFO @ Fri, 05 Jul 2019 21:59:12: 8000000 INFO @ Fri, 05 Jul 2019 21:59:12: 8000000 INFO @ Fri, 05 Jul 2019 21:59:13: 11000000 INFO @ Fri, 05 Jul 2019 21:59:18: 12000000 INFO @ Fri, 05 Jul 2019 21:59:19: 9000000 INFO @ Fri, 05 Jul 2019 21:59:19: 9000000 INFO @ Fri, 05 Jul 2019 21:59:24: 13000000 INFO @ Fri, 05 Jul 2019 21:59:26: 10000000 INFO @ Fri, 05 Jul 2019 21:59:26: 10000000 INFO @ Fri, 05 Jul 2019 21:59:29: 14000000 INFO @ Fri, 05 Jul 2019 21:59:32: 11000000 INFO @ Fri, 05 Jul 2019 21:59:33: 11000000 INFO @ Fri, 05 Jul 2019 21:59:35: 15000000 INFO @ Fri, 05 Jul 2019 21:59:39: 12000000 INFO @ Fri, 05 Jul 2019 21:59:40: 16000000 INFO @ Fri, 05 Jul 2019 21:59:40: 12000000 INFO @ Fri, 05 Jul 2019 21:59:45: 13000000 INFO @ Fri, 05 Jul 2019 21:59:45: 17000000 INFO @ Fri, 05 Jul 2019 21:59:47: 13000000 INFO @ Fri, 05 Jul 2019 21:59:50: 18000000 INFO @ Fri, 05 Jul 2019 21:59:51: 14000000 INFO @ Fri, 05 Jul 2019 21:59:53: 14000000 INFO @ Fri, 05 Jul 2019 21:59:55: 19000000 INFO @ Fri, 05 Jul 2019 21:59:57: 15000000 INFO @ Fri, 05 Jul 2019 21:59:59: 15000000 INFO @ Fri, 05 Jul 2019 22:00:01: 20000000 INFO @ Fri, 05 Jul 2019 22:00:03: 16000000 INFO @ Fri, 05 Jul 2019 22:00:06: 21000000 INFO @ Fri, 05 Jul 2019 22:00:06: 16000000 INFO @ Fri, 05 Jul 2019 22:00:09: 17000000 INFO @ Fri, 05 Jul 2019 22:00:11: 22000000 INFO @ Fri, 05 Jul 2019 22:00:12: 17000000 INFO @ Fri, 05 Jul 2019 22:00:15: 18000000 INFO @ Fri, 05 Jul 2019 22:00:16: 23000000 INFO @ Fri, 05 Jul 2019 22:00:19: 18000000 INFO @ Fri, 05 Jul 2019 22:00:21: 19000000 INFO @ Fri, 05 Jul 2019 22:00:21: 24000000 INFO @ Fri, 05 Jul 2019 22:00:25: 19000000 INFO @ Fri, 05 Jul 2019 22:00:26: 25000000 INFO @ Fri, 05 Jul 2019 22:00:27: 20000000 INFO @ Fri, 05 Jul 2019 22:00:31: 26000000 INFO @ Fri, 05 Jul 2019 22:00:32: 20000000 INFO @ Fri, 05 Jul 2019 22:00:33: 21000000 INFO @ Fri, 05 Jul 2019 22:00:37: 27000000 INFO @ Fri, 05 Jul 2019 22:00:38: 21000000 INFO @ Fri, 05 Jul 2019 22:00:39: 22000000 INFO @ Fri, 05 Jul 2019 22:00:42: 28000000 INFO @ Fri, 05 Jul 2019 22:00:45: 22000000 INFO @ Fri, 05 Jul 2019 22:00:45: 23000000 INFO @ Fri, 05 Jul 2019 22:00:47: 29000000 INFO @ Fri, 05 Jul 2019 22:00:51: 23000000 INFO @ Fri, 05 Jul 2019 22:00:51: 24000000 INFO @ Fri, 05 Jul 2019 22:00:53: 30000000 INFO @ Fri, 05 Jul 2019 22:00:57: 25000000 INFO @ Fri, 05 Jul 2019 22:00:57: 24000000 INFO @ Fri, 05 Jul 2019 22:00:58: 31000000 INFO @ Fri, 05 Jul 2019 22:01:03: 26000000 INFO @ Fri, 05 Jul 2019 22:01:03: 32000000 INFO @ Fri, 05 Jul 2019 22:01:04: 25000000 INFO @ Fri, 05 Jul 2019 22:01:08: 33000000 INFO @ Fri, 05 Jul 2019 22:01:09: 27000000 INFO @ Fri, 05 Jul 2019 22:01:10: 26000000 INFO @ Fri, 05 Jul 2019 22:01:14: 34000000 INFO @ Fri, 05 Jul 2019 22:01:15: 28000000 INFO @ Fri, 05 Jul 2019 22:01:17: 27000000 INFO @ Fri, 05 Jul 2019 22:01:19: 35000000 INFO @ Fri, 05 Jul 2019 22:01:21: 29000000 INFO @ Fri, 05 Jul 2019 22:01:23: 28000000 INFO @ Fri, 05 Jul 2019 22:01:24: 36000000 INFO @ Fri, 05 Jul 2019 22:01:27: 30000000 INFO @ Fri, 05 Jul 2019 22:01:29: 37000000 INFO @ Fri, 05 Jul 2019 22:01:29: 29000000 INFO @ Fri, 05 Jul 2019 22:01:34: 31000000 INFO @ Fri, 05 Jul 2019 22:01:34: 38000000 INFO @ Fri, 05 Jul 2019 22:01:36: 30000000 INFO @ Fri, 05 Jul 2019 22:01:39: 39000000 INFO @ Fri, 05 Jul 2019 22:01:40: 32000000 INFO @ Fri, 05 Jul 2019 22:01:42: 31000000 INFO @ Fri, 05 Jul 2019 22:01:45: 40000000 INFO @ Fri, 05 Jul 2019 22:01:47: 33000000 INFO @ Fri, 05 Jul 2019 22:01:49: 32000000 INFO @ Fri, 05 Jul 2019 22:01:51: 41000000 INFO @ Fri, 05 Jul 2019 22:01:53: 34000000 INFO @ Fri, 05 Jul 2019 22:01:55: 33000000 INFO @ Fri, 05 Jul 2019 22:01:56: 42000000 INFO @ Fri, 05 Jul 2019 22:01:59: 35000000 INFO @ Fri, 05 Jul 2019 22:02:01: 43000000 INFO @ Fri, 05 Jul 2019 22:02:02: 34000000 INFO @ Fri, 05 Jul 2019 22:02:06: 36000000 INFO @ Fri, 05 Jul 2019 22:02:06: 44000000 INFO @ Fri, 05 Jul 2019 22:02:08: 35000000 INFO @ Fri, 05 Jul 2019 22:02:12: 45000000 INFO @ Fri, 05 Jul 2019 22:02:12: 37000000 INFO @ Fri, 05 Jul 2019 22:02:14: 36000000 INFO @ Fri, 05 Jul 2019 22:02:17: 46000000 INFO @ Fri, 05 Jul 2019 22:02:18: 38000000 INFO @ Fri, 05 Jul 2019 22:02:21: 37000000 INFO @ Fri, 05 Jul 2019 22:02:22: 47000000 INFO @ Fri, 05 Jul 2019 22:02:24: 39000000 INFO @ Fri, 05 Jul 2019 22:02:27: 38000000 INFO @ Fri, 05 Jul 2019 22:02:28: 48000000 INFO @ Fri, 05 Jul 2019 22:02:31: 40000000 INFO @ Fri, 05 Jul 2019 22:02:33: 49000000 INFO @ Fri, 05 Jul 2019 22:02:34: 39000000 INFO @ Fri, 05 Jul 2019 22:02:37: 41000000 INFO @ Fri, 05 Jul 2019 22:02:38: 50000000 INFO @ Fri, 05 Jul 2019 22:02:42: 40000000 INFO @ Fri, 05 Jul 2019 22:02:43: 42000000 INFO @ Fri, 05 Jul 2019 22:02:43: 51000000 INFO @ Fri, 05 Jul 2019 22:02:49: 52000000 INFO @ Fri, 05 Jul 2019 22:02:49: 41000000 INFO @ Fri, 05 Jul 2019 22:02:50: 43000000 INFO @ Fri, 05 Jul 2019 22:02:54: 53000000 INFO @ Fri, 05 Jul 2019 22:02:56: 42000000 INFO @ Fri, 05 Jul 2019 22:02:56: 44000000 INFO @ Fri, 05 Jul 2019 22:02:59: 54000000 INFO @ Fri, 05 Jul 2019 22:03:02: 45000000 INFO @ Fri, 05 Jul 2019 22:03:03: 43000000 INFO @ Fri, 05 Jul 2019 22:03:04: 55000000 INFO @ Fri, 05 Jul 2019 22:03:08: 46000000 INFO @ Fri, 05 Jul 2019 22:03:09: 44000000 INFO @ Fri, 05 Jul 2019 22:03:10: 56000000 INFO @ Fri, 05 Jul 2019 22:03:15: 57000000 INFO @ Fri, 05 Jul 2019 22:03:16: 47000000 INFO @ Fri, 05 Jul 2019 22:03:17: 45000000 INFO @ Fri, 05 Jul 2019 22:03:20: 58000000 INFO @ Fri, 05 Jul 2019 22:03:22: 48000000 INFO @ Fri, 05 Jul 2019 22:03:23: 46000000 INFO @ Fri, 05 Jul 2019 22:03:25: 59000000 INFO @ Fri, 05 Jul 2019 22:03:28: 49000000 INFO @ Fri, 05 Jul 2019 22:03:30: 60000000 INFO @ Fri, 05 Jul 2019 22:03:30: 47000000 INFO @ Fri, 05 Jul 2019 22:03:35: 50000000 INFO @ Fri, 05 Jul 2019 22:03:35: 61000000 INFO @ Fri, 05 Jul 2019 22:03:37: 48000000 INFO @ Fri, 05 Jul 2019 22:03:40: 62000000 INFO @ Fri, 05 Jul 2019 22:03:41: 51000000 INFO @ Fri, 05 Jul 2019 22:03:43: 49000000 INFO @ Fri, 05 Jul 2019 22:03:45: 63000000 INFO @ Fri, 05 Jul 2019 22:03:47: 52000000 INFO @ Fri, 05 Jul 2019 22:03:50: 50000000 INFO @ Fri, 05 Jul 2019 22:03:50: 64000000 INFO @ Fri, 05 Jul 2019 22:03:54: 53000000 INFO @ Fri, 05 Jul 2019 22:03:55: 65000000 INFO @ Fri, 05 Jul 2019 22:03:56: 51000000 INFO @ Fri, 05 Jul 2019 22:04:00: 54000000 INFO @ Fri, 05 Jul 2019 22:04:00: 66000000 INFO @ Fri, 05 Jul 2019 22:04:02: 52000000 INFO @ Fri, 05 Jul 2019 22:04:05: 67000000 INFO @ Fri, 05 Jul 2019 22:04:06: 55000000 INFO @ Fri, 05 Jul 2019 22:04:09: 53000000 INFO @ Fri, 05 Jul 2019 22:04:10: 68000000 INFO @ Fri, 05 Jul 2019 22:04:12: 56000000 INFO @ Fri, 05 Jul 2019 22:04:15: 54000000 INFO @ Fri, 05 Jul 2019 22:04:15: 69000000 INFO @ Fri, 05 Jul 2019 22:04:18: 57000000 INFO @ Fri, 05 Jul 2019 22:04:20: 70000000 INFO @ Fri, 05 Jul 2019 22:04:22: 55000000 INFO @ Fri, 05 Jul 2019 22:04:24: 58000000 INFO @ Fri, 05 Jul 2019 22:04:26: 71000000 INFO @ Fri, 05 Jul 2019 22:04:28: 56000000 INFO @ Fri, 05 Jul 2019 22:04:30: 59000000 INFO @ Fri, 05 Jul 2019 22:04:31: 72000000 INFO @ Fri, 05 Jul 2019 22:04:34: 57000000 INFO @ Fri, 05 Jul 2019 22:04:36: 60000000 INFO @ Fri, 05 Jul 2019 22:04:36: 73000000 INFO @ Fri, 05 Jul 2019 22:04:40: 58000000 INFO @ Fri, 05 Jul 2019 22:04:41: 74000000 INFO @ Fri, 05 Jul 2019 22:04:41: 61000000 INFO @ Fri, 05 Jul 2019 22:04:46: 75000000 INFO @ Fri, 05 Jul 2019 22:04:47: 59000000 INFO @ Fri, 05 Jul 2019 22:04:48: 62000000 INFO @ Fri, 05 Jul 2019 22:04:51: 76000000 INFO @ Fri, 05 Jul 2019 22:04:53: 60000000 INFO @ Fri, 05 Jul 2019 22:04:54: 63000000 INFO @ Fri, 05 Jul 2019 22:04:56: 77000000 INFO @ Fri, 05 Jul 2019 22:04:59: 61000000 INFO @ Fri, 05 Jul 2019 22:05:00: 64000000 INFO @ Fri, 05 Jul 2019 22:05:02: 78000000 INFO @ Fri, 05 Jul 2019 22:05:05: 62000000 INFO @ Fri, 05 Jul 2019 22:05:06: 65000000 INFO @ Fri, 05 Jul 2019 22:05:07: 79000000 INFO @ Fri, 05 Jul 2019 22:05:11: 63000000 INFO @ Fri, 05 Jul 2019 22:05:12: 66000000 INFO @ Fri, 05 Jul 2019 22:05:12: 80000000 INFO @ Fri, 05 Jul 2019 22:05:17: 81000000 INFO @ Fri, 05 Jul 2019 22:05:18: 64000000 INFO @ Fri, 05 Jul 2019 22:05:18: 67000000 INFO @ Fri, 05 Jul 2019 22:05:22: 82000000 INFO @ Fri, 05 Jul 2019 22:05:24: 68000000 INFO @ Fri, 05 Jul 2019 22:05:24: 65000000 INFO @ Fri, 05 Jul 2019 22:05:28: 83000000 INFO @ Fri, 05 Jul 2019 22:05:30: 69000000 INFO @ Fri, 05 Jul 2019 22:05:30: 66000000 INFO @ Fri, 05 Jul 2019 22:05:33: 84000000 INFO @ Fri, 05 Jul 2019 22:05:36: 70000000 INFO @ Fri, 05 Jul 2019 22:05:36: 67000000 INFO @ Fri, 05 Jul 2019 22:05:38: 85000000 INFO @ Fri, 05 Jul 2019 22:05:42: 71000000 INFO @ Fri, 05 Jul 2019 22:05:42: 68000000 INFO @ Fri, 05 Jul 2019 22:05:43: 86000000 INFO @ Fri, 05 Jul 2019 22:05:48: 72000000 INFO @ Fri, 05 Jul 2019 22:05:48: 87000000 INFO @ Fri, 05 Jul 2019 22:05:49: 69000000 INFO @ Fri, 05 Jul 2019 22:05:53: 88000000 INFO @ Fri, 05 Jul 2019 22:05:53: 73000000 INFO @ Fri, 05 Jul 2019 22:05:55: 70000000 INFO @ Fri, 05 Jul 2019 22:05:58: 89000000 INFO @ Fri, 05 Jul 2019 22:05:59: 74000000 INFO @ Fri, 05 Jul 2019 22:06:01: 71000000 INFO @ Fri, 05 Jul 2019 22:06:03: 90000000 INFO @ Fri, 05 Jul 2019 22:06:05: 75000000 INFO @ Fri, 05 Jul 2019 22:06:07: 72000000 INFO @ Fri, 05 Jul 2019 22:06:08: 91000000 INFO @ Fri, 05 Jul 2019 22:06:11: 76000000 INFO @ Fri, 05 Jul 2019 22:06:13: 92000000 INFO @ Fri, 05 Jul 2019 22:06:13: 73000000 INFO @ Fri, 05 Jul 2019 22:06:18: 77000000 INFO @ Fri, 05 Jul 2019 22:06:18: 93000000 INFO @ Fri, 05 Jul 2019 22:06:19: 74000000 INFO @ Fri, 05 Jul 2019 22:06:23: 94000000 INFO @ Fri, 05 Jul 2019 22:06:24: 78000000 INFO @ Fri, 05 Jul 2019 22:06:26: 75000000 INFO @ Fri, 05 Jul 2019 22:06:28: 95000000 INFO @ Fri, 05 Jul 2019 22:06:30: 79000000 INFO @ Fri, 05 Jul 2019 22:06:30: #1 tag size is determined as 25 bps INFO @ Fri, 05 Jul 2019 22:06:30: #1 tag size = 25 INFO @ Fri, 05 Jul 2019 22:06:30: #1 total tags in treatment: 41255590 INFO @ Fri, 05 Jul 2019 22:06:30: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 22:06:30: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 22:06:31: #1 tags after filtering in treatment: 9999915 INFO @ Fri, 05 Jul 2019 22:06:31: #1 Redundant rate of treatment: 0.76 INFO @ Fri, 05 Jul 2019 22:06:31: #1 finished! INFO @ Fri, 05 Jul 2019 22:06:31: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 22:06:31: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 22:06:32: 76000000 INFO @ Fri, 05 Jul 2019 22:06:32: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 22:06:32: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 22:06:32: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.05_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.05_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.05_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.05_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 22:06:36: 80000000 INFO @ Fri, 05 Jul 2019 22:06:38: 77000000 INFO @ Fri, 05 Jul 2019 22:06:42: 81000000 INFO @ Fri, 05 Jul 2019 22:06:44: 78000000 INFO @ Fri, 05 Jul 2019 22:06:48: 82000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 05 Jul 2019 22:06:51: 79000000 INFO @ Fri, 05 Jul 2019 22:06:55: 83000000 INFO @ Fri, 05 Jul 2019 22:06:57: 80000000 INFO @ Fri, 05 Jul 2019 22:07:01: 84000000 INFO @ Fri, 05 Jul 2019 22:07:03: 81000000 INFO @ Fri, 05 Jul 2019 22:07:07: 85000000 INFO @ Fri, 05 Jul 2019 22:07:10: 82000000 INFO @ Fri, 05 Jul 2019 22:07:14: 86000000 BigWig に変換しました。 INFO @ Fri, 05 Jul 2019 22:07:16: 83000000 INFO @ Fri, 05 Jul 2019 22:07:20: 87000000 INFO @ Fri, 05 Jul 2019 22:07:23: 84000000 INFO @ Fri, 05 Jul 2019 22:07:26: 88000000 INFO @ Fri, 05 Jul 2019 22:07:29: 85000000 INFO @ Fri, 05 Jul 2019 22:07:32: 89000000 INFO @ Fri, 05 Jul 2019 22:07:36: 86000000 INFO @ Fri, 05 Jul 2019 22:07:38: 90000000 INFO @ Fri, 05 Jul 2019 22:07:42: 87000000 INFO @ Fri, 05 Jul 2019 22:07:44: 91000000 INFO @ Fri, 05 Jul 2019 22:07:49: 88000000 INFO @ Fri, 05 Jul 2019 22:07:51: 92000000 INFO @ Fri, 05 Jul 2019 22:07:55: 89000000 INFO @ Fri, 05 Jul 2019 22:07:57: 93000000 INFO @ Fri, 05 Jul 2019 22:08:02: 90000000 INFO @ Fri, 05 Jul 2019 22:08:03: 94000000 INFO @ Fri, 05 Jul 2019 22:08:08: 91000000 INFO @ Fri, 05 Jul 2019 22:08:09: 95000000 INFO @ Fri, 05 Jul 2019 22:08:12: #1 tag size is determined as 25 bps INFO @ Fri, 05 Jul 2019 22:08:12: #1 tag size = 25 INFO @ Fri, 05 Jul 2019 22:08:12: #1 total tags in treatment: 41255590 INFO @ Fri, 05 Jul 2019 22:08:12: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 22:08:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 22:08:13: #1 tags after filtering in treatment: 9999915 INFO @ Fri, 05 Jul 2019 22:08:13: #1 Redundant rate of treatment: 0.76 INFO @ Fri, 05 Jul 2019 22:08:13: #1 finished! INFO @ Fri, 05 Jul 2019 22:08:13: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 22:08:13: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 22:08:14: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 22:08:14: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 22:08:14: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.20_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.20_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.20_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.20_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 22:08:14: 92000000 INFO @ Fri, 05 Jul 2019 22:08:20: 93000000 INFO @ Fri, 05 Jul 2019 22:08:26: 94000000 INFO @ Fri, 05 Jul 2019 22:08:33: 95000000 INFO @ Fri, 05 Jul 2019 22:08:35: #1 tag size is determined as 25 bps INFO @ Fri, 05 Jul 2019 22:08:35: #1 tag size = 25 INFO @ Fri, 05 Jul 2019 22:08:35: #1 total tags in treatment: 41255590 INFO @ Fri, 05 Jul 2019 22:08:35: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 22:08:35: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 22:08:36: #1 tags after filtering in treatment: 9999915 INFO @ Fri, 05 Jul 2019 22:08:36: #1 Redundant rate of treatment: 0.76 INFO @ Fri, 05 Jul 2019 22:08:36: #1 finished! INFO @ Fri, 05 Jul 2019 22:08:36: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 22:08:36: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 22:08:37: #2 number of paired peaks: 0 WARNING @ Fri, 05 Jul 2019 22:08:37: Too few paired peaks (0) so I can not build the model! Broader your MFOLD range parameter may erase this error. If it still can't build the model, we suggest to use --nomodel and --extsize 147 or other fixed number instead. WARNING @ Fri, 05 Jul 2019 22:08:37: Process for pairing-model is terminated! cut: /home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.10_peaks.narrowPeak: No such file or directory pass1 - making usageList (0 chroms): 1 millis needLargeMem: trying to allocate 0 bytes (limit: 17179869184) rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.10_model.r’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.10_*.xls’: No such file or directory rm: cannot remove ‘/home/okishinya/chipatlas/results/sacCer3/SRX160479/SRX160479.10_peaks.narrowPeak’: No such file or directory CompletedMACS2peakCalling