Job ID = 8184289 SRX = SRX8047578 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-08-10T03:03:56 prefetch.2.10.7: 1) Downloading 'SRR11471303'... 2020-08-10T03:03:56 prefetch.2.10.7: Downloading via HTTPS... 2020-08-10T03:07:17 prefetch.2.10.7: HTTPS download succeed 2020-08-10T03:07:17 prefetch.2.10.7: 1) 'SRR11471303' was downloaded successfully Read 54547789 spots for SRR11471303/SRR11471303.sra Written 54547789 spots for SRR11471303/SRR11471303.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:46:34 54547789 reads; of these: 54547789 (100.00%) were unpaired; of these: 1898314 (3.48%) aligned 0 times 38915384 (71.34%) aligned exactly 1 time 13734091 (25.18%) aligned >1 times 96.52% overall alignment rate Time searching: 00:46:35 Overall time: 00:46:35 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 24 files... [bam_rmdupse_core] 4024684 / 52649475 = 0.0764 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:10:22: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:10:22: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:10:22: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:10:28: 1000000 INFO @ Mon, 10 Aug 2020 13:10:34: 2000000 INFO @ Mon, 10 Aug 2020 13:10:40: 3000000 INFO @ Mon, 10 Aug 2020 13:10:46: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:10:51: 5000000 INFO @ Mon, 10 Aug 2020 13:10:52: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:10:52: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:10:52: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:10:57: 6000000 INFO @ Mon, 10 Aug 2020 13:10:58: 1000000 INFO @ Mon, 10 Aug 2020 13:11:04: 7000000 INFO @ Mon, 10 Aug 2020 13:11:05: 2000000 INFO @ Mon, 10 Aug 2020 13:11:10: 8000000 INFO @ Mon, 10 Aug 2020 13:11:11: 3000000 INFO @ Mon, 10 Aug 2020 13:11:16: 9000000 INFO @ Mon, 10 Aug 2020 13:11:17: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:11:22: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:11:22: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:11:22: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:11:22: 10000000 INFO @ Mon, 10 Aug 2020 13:11:23: 5000000 INFO @ Mon, 10 Aug 2020 13:11:28: 1000000 INFO @ Mon, 10 Aug 2020 13:11:28: 11000000 INFO @ Mon, 10 Aug 2020 13:11:30: 6000000 INFO @ Mon, 10 Aug 2020 13:11:35: 2000000 INFO @ Mon, 10 Aug 2020 13:11:35: 12000000 INFO @ Mon, 10 Aug 2020 13:11:36: 7000000 INFO @ Mon, 10 Aug 2020 13:11:41: 13000000 INFO @ Mon, 10 Aug 2020 13:11:41: 3000000 INFO @ Mon, 10 Aug 2020 13:11:42: 8000000 INFO @ Mon, 10 Aug 2020 13:11:47: 4000000 INFO @ Mon, 10 Aug 2020 13:11:47: 14000000 INFO @ Mon, 10 Aug 2020 13:11:48: 9000000 INFO @ Mon, 10 Aug 2020 13:11:53: 5000000 INFO @ Mon, 10 Aug 2020 13:11:53: 15000000 INFO @ Mon, 10 Aug 2020 13:11:55: 10000000 INFO @ Mon, 10 Aug 2020 13:12:00: 6000000 INFO @ Mon, 10 Aug 2020 13:12:00: 16000000 INFO @ Mon, 10 Aug 2020 13:12:01: 11000000 INFO @ Mon, 10 Aug 2020 13:12:06: 7000000 INFO @ Mon, 10 Aug 2020 13:12:06: 17000000 INFO @ Mon, 10 Aug 2020 13:12:07: 12000000 INFO @ Mon, 10 Aug 2020 13:12:12: 8000000 INFO @ Mon, 10 Aug 2020 13:12:12: 18000000 INFO @ Mon, 10 Aug 2020 13:12:13: 13000000 INFO @ Mon, 10 Aug 2020 13:12:18: 9000000 INFO @ Mon, 10 Aug 2020 13:12:18: 19000000 INFO @ Mon, 10 Aug 2020 13:12:19: 14000000 INFO @ Mon, 10 Aug 2020 13:12:25: 10000000 INFO @ Mon, 10 Aug 2020 13:12:25: 20000000 INFO @ Mon, 10 Aug 2020 13:12:26: 15000000 INFO @ Mon, 10 Aug 2020 13:12:31: 21000000 INFO @ Mon, 10 Aug 2020 13:12:31: 11000000 INFO @ Mon, 10 Aug 2020 13:12:32: 16000000 INFO @ Mon, 10 Aug 2020 13:12:37: 22000000 INFO @ Mon, 10 Aug 2020 13:12:37: 12000000 INFO @ Mon, 10 Aug 2020 13:12:38: 17000000 INFO @ Mon, 10 Aug 2020 13:12:43: 23000000 INFO @ Mon, 10 Aug 2020 13:12:43: 13000000 INFO @ Mon, 10 Aug 2020 13:12:45: 18000000 INFO @ Mon, 10 Aug 2020 13:12:50: 24000000 INFO @ Mon, 10 Aug 2020 13:12:50: 14000000 INFO @ Mon, 10 Aug 2020 13:12:51: 19000000 INFO @ Mon, 10 Aug 2020 13:12:56: 25000000 INFO @ Mon, 10 Aug 2020 13:12:56: 15000000 INFO @ Mon, 10 Aug 2020 13:12:57: 20000000 INFO @ Mon, 10 Aug 2020 13:13:02: 26000000 INFO @ Mon, 10 Aug 2020 13:13:02: 16000000 INFO @ Mon, 10 Aug 2020 13:13:04: 21000000 INFO @ Mon, 10 Aug 2020 13:13:08: 27000000 INFO @ Mon, 10 Aug 2020 13:13:08: 17000000 INFO @ Mon, 10 Aug 2020 13:13:10: 22000000 INFO @ Mon, 10 Aug 2020 13:13:15: 18000000 INFO @ Mon, 10 Aug 2020 13:13:15: 28000000 INFO @ Mon, 10 Aug 2020 13:13:16: 23000000 INFO @ Mon, 10 Aug 2020 13:13:21: 19000000 INFO @ Mon, 10 Aug 2020 13:13:21: 29000000 INFO @ Mon, 10 Aug 2020 13:13:22: 24000000 INFO @ Mon, 10 Aug 2020 13:13:27: 20000000 INFO @ Mon, 10 Aug 2020 13:13:27: 30000000 INFO @ Mon, 10 Aug 2020 13:13:29: 25000000 INFO @ Mon, 10 Aug 2020 13:13:33: 21000000 INFO @ Mon, 10 Aug 2020 13:13:33: 31000000 INFO @ Mon, 10 Aug 2020 13:13:35: 26000000 INFO @ Mon, 10 Aug 2020 13:13:40: 22000000 INFO @ Mon, 10 Aug 2020 13:13:40: 32000000 INFO @ Mon, 10 Aug 2020 13:13:41: 27000000 INFO @ Mon, 10 Aug 2020 13:13:46: 23000000 INFO @ Mon, 10 Aug 2020 13:13:46: 33000000 INFO @ Mon, 10 Aug 2020 13:13:48: 28000000 INFO @ Mon, 10 Aug 2020 13:13:52: 24000000 INFO @ Mon, 10 Aug 2020 13:13:52: 34000000 INFO @ Mon, 10 Aug 2020 13:13:54: 29000000 INFO @ Mon, 10 Aug 2020 13:13:58: 25000000 INFO @ Mon, 10 Aug 2020 13:13:58: 35000000 INFO @ Mon, 10 Aug 2020 13:14:00: 30000000 INFO @ Mon, 10 Aug 2020 13:14:04: 26000000 INFO @ Mon, 10 Aug 2020 13:14:05: 36000000 INFO @ Mon, 10 Aug 2020 13:14:06: 31000000 INFO @ Mon, 10 Aug 2020 13:14:11: 27000000 INFO @ Mon, 10 Aug 2020 13:14:11: 37000000 INFO @ Mon, 10 Aug 2020 13:14:13: 32000000 INFO @ Mon, 10 Aug 2020 13:14:17: 28000000 INFO @ Mon, 10 Aug 2020 13:14:17: 38000000 INFO @ Mon, 10 Aug 2020 13:14:19: 33000000 INFO @ Mon, 10 Aug 2020 13:14:23: 29000000 INFO @ Mon, 10 Aug 2020 13:14:23: 39000000 INFO @ Mon, 10 Aug 2020 13:14:25: 34000000 INFO @ Mon, 10 Aug 2020 13:14:29: 30000000 INFO @ Mon, 10 Aug 2020 13:14:30: 40000000 INFO @ Mon, 10 Aug 2020 13:14:31: 35000000 INFO @ Mon, 10 Aug 2020 13:14:36: 31000000 INFO @ Mon, 10 Aug 2020 13:14:36: 41000000 INFO @ Mon, 10 Aug 2020 13:14:38: 36000000 INFO @ Mon, 10 Aug 2020 13:14:42: 32000000 INFO @ Mon, 10 Aug 2020 13:14:42: 42000000 INFO @ Mon, 10 Aug 2020 13:14:44: 37000000 INFO @ Mon, 10 Aug 2020 13:14:48: 33000000 INFO @ Mon, 10 Aug 2020 13:14:49: 43000000 INFO @ Mon, 10 Aug 2020 13:14:50: 38000000 INFO @ Mon, 10 Aug 2020 13:14:54: 34000000 INFO @ Mon, 10 Aug 2020 13:14:55: 44000000 INFO @ Mon, 10 Aug 2020 13:14:57: 39000000 INFO @ Mon, 10 Aug 2020 13:15:01: 35000000 INFO @ Mon, 10 Aug 2020 13:15:01: 45000000 INFO @ Mon, 10 Aug 2020 13:15:03: 40000000 INFO @ Mon, 10 Aug 2020 13:15:07: 36000000 INFO @ Mon, 10 Aug 2020 13:15:07: 46000000 INFO @ Mon, 10 Aug 2020 13:15:09: 41000000 INFO @ Mon, 10 Aug 2020 13:15:13: 37000000 INFO @ Mon, 10 Aug 2020 13:15:14: 47000000 INFO @ Mon, 10 Aug 2020 13:15:15: 42000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Mon, 10 Aug 2020 13:15:19: 38000000 INFO @ Mon, 10 Aug 2020 13:15:20: 48000000 INFO @ Mon, 10 Aug 2020 13:15:22: 43000000 INFO @ Mon, 10 Aug 2020 13:15:24: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:15:24: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:15:24: #1 total tags in treatment: 48624791 INFO @ Mon, 10 Aug 2020 13:15:24: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:15:24: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:15:25: #1 tags after filtering in treatment: 48624719 INFO @ Mon, 10 Aug 2020 13:15:25: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:15:25: #1 finished! INFO @ Mon, 10 Aug 2020 13:15:25: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:15:25: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:15:25: 39000000 INFO @ Mon, 10 Aug 2020 13:15:28: 44000000 INFO @ Mon, 10 Aug 2020 13:15:29: #2 number of paired peaks: 10274 INFO @ Mon, 10 Aug 2020 13:15:29: start model_add_line... INFO @ Mon, 10 Aug 2020 13:15:30: start X-correlation... INFO @ Mon, 10 Aug 2020 13:15:30: end of X-cor INFO @ Mon, 10 Aug 2020 13:15:30: #2 finished! INFO @ Mon, 10 Aug 2020 13:15:30: #2 predicted fragment length is 63 bps INFO @ Mon, 10 Aug 2020 13:15:30: #2 alternative fragment length(s) may be 63 bps INFO @ Mon, 10 Aug 2020 13:15:30: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.05_model.r WARNING @ Mon, 10 Aug 2020 13:15:30: #2 Since the d (63) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 13:15:30: #2 You may need to consider one of the other alternative d(s): 63 WARNING @ Mon, 10 Aug 2020 13:15:30: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 13:15:30: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:15:30: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 13:15:32: 40000000 INFO @ Mon, 10 Aug 2020 13:15:34: 45000000 INFO @ Mon, 10 Aug 2020 13:15:38: 41000000 INFO @ Mon, 10 Aug 2020 13:15:40: 46000000 INFO @ Mon, 10 Aug 2020 13:15:44: 42000000 INFO @ Mon, 10 Aug 2020 13:15:46: 47000000 INFO @ Mon, 10 Aug 2020 13:15:50: 43000000 INFO @ Mon, 10 Aug 2020 13:15:52: 48000000 INFO @ Mon, 10 Aug 2020 13:15:56: 44000000 INFO @ Mon, 10 Aug 2020 13:15:57: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:15:57: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:15:57: #1 total tags in treatment: 48624791 INFO @ Mon, 10 Aug 2020 13:15:57: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:15:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:15:58: #1 tags after filtering in treatment: 48624719 INFO @ Mon, 10 Aug 2020 13:15:58: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:15:58: #1 finished! INFO @ Mon, 10 Aug 2020 13:15:58: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:15:58: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:16:02: #2 number of paired peaks: 10274 INFO @ Mon, 10 Aug 2020 13:16:02: start model_add_line... INFO @ Mon, 10 Aug 2020 13:16:02: 45000000 INFO @ Mon, 10 Aug 2020 13:16:02: start X-correlation... INFO @ Mon, 10 Aug 2020 13:16:02: end of X-cor INFO @ Mon, 10 Aug 2020 13:16:02: #2 finished! INFO @ Mon, 10 Aug 2020 13:16:02: #2 predicted fragment length is 63 bps INFO @ Mon, 10 Aug 2020 13:16:02: #2 alternative fragment length(s) may be 63 bps INFO @ Mon, 10 Aug 2020 13:16:02: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.10_model.r WARNING @ Mon, 10 Aug 2020 13:16:02: #2 Since the d (63) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 13:16:02: #2 You may need to consider one of the other alternative d(s): 63 WARNING @ Mon, 10 Aug 2020 13:16:02: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 13:16:02: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:16:02: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 13:16:08: 46000000 INFO @ Mon, 10 Aug 2020 13:16:14: 47000000 INFO @ Mon, 10 Aug 2020 13:16:19: 48000000 INFO @ Mon, 10 Aug 2020 13:16:23: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:16:23: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:16:23: #1 total tags in treatment: 48624791 INFO @ Mon, 10 Aug 2020 13:16:23: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:16:23: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:16:24: #1 tags after filtering in treatment: 48624719 INFO @ Mon, 10 Aug 2020 13:16:24: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:16:24: #1 finished! INFO @ Mon, 10 Aug 2020 13:16:24: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:16:24: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:16:28: #2 number of paired peaks: 10274 INFO @ Mon, 10 Aug 2020 13:16:28: start model_add_line... INFO @ Mon, 10 Aug 2020 13:16:28: start X-correlation... INFO @ Mon, 10 Aug 2020 13:16:28: end of X-cor INFO @ Mon, 10 Aug 2020 13:16:28: #2 finished! INFO @ Mon, 10 Aug 2020 13:16:28: #2 predicted fragment length is 63 bps INFO @ Mon, 10 Aug 2020 13:16:28: #2 alternative fragment length(s) may be 63 bps INFO @ Mon, 10 Aug 2020 13:16:28: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.20_model.r WARNING @ Mon, 10 Aug 2020 13:16:28: #2 Since the d (63) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 13:16:28: #2 You may need to consider one of the other alternative d(s): 63 WARNING @ Mon, 10 Aug 2020 13:16:28: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 13:16:28: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:16:28: #3 Pre-compute pvalue-qvalue table... BigWig に変換しました。 INFO @ Mon, 10 Aug 2020 13:17:18: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:17:51: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:18:12: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:18:13: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.05_peaks.xls INFO @ Mon, 10 Aug 2020 13:18:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.05_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:18:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.05_summits.bed INFO @ Mon, 10 Aug 2020 13:18:13: Done! pass1 - making usageList (84 chroms): 2 millis pass2 - checking and writing primary data (5049 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 13:18:45: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.10_peaks.xls INFO @ Mon, 10 Aug 2020 13:18:45: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.10_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:18:45: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.10_summits.bed INFO @ Mon, 10 Aug 2020 13:18:45: Done! pass1 - making usageList (62 chroms): 1 millis pass2 - checking and writing primary data (2018 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 13:19:07: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.20_peaks.xls INFO @ Mon, 10 Aug 2020 13:19:07: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.20_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:19:07: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047578/SRX8047578.20_summits.bed INFO @ Mon, 10 Aug 2020 13:19:07: Done! pass1 - making usageList (43 chroms): 1 millis pass2 - checking and writing primary data (736 records, 4 fields): 4 millis CompletedMACS2peakCalling