Job ID = 11632736 sra ファイルのダウンロード中... Completed: 1717056K bytes transferred in 18 seconds (753289K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: SINGLE fastq に変換中... Read 101363181 spots for /home/okishinya/chipatlas/results/rn6/SRX4497206/SRR7633476.sra Written 101363181 spots for /home/okishinya/chipatlas/results/rn6/SRX4497206/SRR7633476.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:02 Time loading mirror index: 00:00:01 Multiseed full-index search: 01:18:22 101363181 reads; of these: 101363181 (100.00%) were unpaired; of these: 5178266 (5.11%) aligned 0 times 71724578 (70.76%) aligned exactly 1 time 24460337 (24.13%) aligned >1 times 94.89% overall alignment rate Time searching: 01:18:26 Overall time: 01:18:26 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 40 files... [bam_rmdupse_core] 32196761 / 96184915 = 0.3347 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 15 Feb 2019 09:07:36: # Command line: callpeak -t SRX4497206.bam -f BAM -g 2.15e9 -n SRX4497206.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX4497206.20 # format = BAM # ChIP-seq file = ['SRX4497206.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 09:07:36: #1 read tag files... INFO @ Fri, 15 Feb 2019 09:07:36: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 09:07:36: # Command line: callpeak -t SRX4497206.bam -f BAM -g 2.15e9 -n SRX4497206.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX4497206.05 # format = BAM # ChIP-seq file = ['SRX4497206.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 09:07:36: #1 read tag files... INFO @ Fri, 15 Feb 2019 09:07:36: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 09:07:36: # Command line: callpeak -t SRX4497206.bam -f BAM -g 2.15e9 -n SRX4497206.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX4497206.10 # format = BAM # ChIP-seq file = ['SRX4497206.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 09:07:36: #1 read tag files... INFO @ Fri, 15 Feb 2019 09:07:36: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 09:07:42: 1000000 INFO @ Fri, 15 Feb 2019 09:07:42: 1000000 INFO @ Fri, 15 Feb 2019 09:07:42: 1000000 INFO @ Fri, 15 Feb 2019 09:07:48: 2000000 INFO @ Fri, 15 Feb 2019 09:07:48: 2000000 INFO @ Fri, 15 Feb 2019 09:07:48: 2000000 INFO @ Fri, 15 Feb 2019 09:07:54: 3000000 INFO @ Fri, 15 Feb 2019 09:07:54: 3000000 INFO @ Fri, 15 Feb 2019 09:07:55: 3000000 INFO @ Fri, 15 Feb 2019 09:08:00: 4000000 INFO @ Fri, 15 Feb 2019 09:08:00: 4000000 INFO @ Fri, 15 Feb 2019 09:08:01: 4000000 INFO @ Fri, 15 Feb 2019 09:08:06: 5000000 INFO @ Fri, 15 Feb 2019 09:08:06: 5000000 INFO @ Fri, 15 Feb 2019 09:08:07: 5000000 INFO @ Fri, 15 Feb 2019 09:08:12: 6000000 INFO @ Fri, 15 Feb 2019 09:08:12: 6000000 INFO @ Fri, 15 Feb 2019 09:08:12: 6000000 INFO @ Fri, 15 Feb 2019 09:08:18: 7000000 INFO @ Fri, 15 Feb 2019 09:08:18: 7000000 INFO @ Fri, 15 Feb 2019 09:08:19: 7000000 INFO @ Fri, 15 Feb 2019 09:08:24: 8000000 INFO @ Fri, 15 Feb 2019 09:08:24: 8000000 INFO @ Fri, 15 Feb 2019 09:08:25: 8000000 INFO @ Fri, 15 Feb 2019 09:08:30: 9000000 INFO @ Fri, 15 Feb 2019 09:08:31: 9000000 INFO @ Fri, 15 Feb 2019 09:08:31: 9000000 INFO @ Fri, 15 Feb 2019 09:08:36: 10000000 INFO @ Fri, 15 Feb 2019 09:08:37: 10000000 INFO @ Fri, 15 Feb 2019 09:08:38: 10000000 INFO @ Fri, 15 Feb 2019 09:08:41: 11000000 INFO @ Fri, 15 Feb 2019 09:08:43: 11000000 INFO @ Fri, 15 Feb 2019 09:08:44: 11000000 INFO @ Fri, 15 Feb 2019 09:08:47: 12000000 INFO @ Fri, 15 Feb 2019 09:08:49: 12000000 INFO @ Fri, 15 Feb 2019 09:08:50: 12000000 INFO @ Fri, 15 Feb 2019 09:08:53: 13000000 INFO @ Fri, 15 Feb 2019 09:08:55: 13000000 INFO @ Fri, 15 Feb 2019 09:08:56: 13000000 INFO @ Fri, 15 Feb 2019 09:08:58: 14000000 INFO @ Fri, 15 Feb 2019 09:09:02: 14000000 INFO @ Fri, 15 Feb 2019 09:09:02: 14000000 INFO @ Fri, 15 Feb 2019 09:09:04: 15000000 INFO @ Fri, 15 Feb 2019 09:09:08: 15000000 INFO @ Fri, 15 Feb 2019 09:09:08: 15000000 INFO @ Fri, 15 Feb 2019 09:09:10: 16000000 INFO @ Fri, 15 Feb 2019 09:09:14: 16000000 INFO @ Fri, 15 Feb 2019 09:09:15: 16000000 INFO @ Fri, 15 Feb 2019 09:09:16: 17000000 INFO @ Fri, 15 Feb 2019 09:09:20: 17000000 INFO @ Fri, 15 Feb 2019 09:09:21: 17000000 INFO @ Fri, 15 Feb 2019 09:09:22: 18000000 INFO @ Fri, 15 Feb 2019 09:09:27: 18000000 INFO @ Fri, 15 Feb 2019 09:09:28: 18000000 INFO @ Fri, 15 Feb 2019 09:09:28: 19000000 INFO @ Fri, 15 Feb 2019 09:09:33: 19000000 INFO @ Fri, 15 Feb 2019 09:09:34: 19000000 INFO @ Fri, 15 Feb 2019 09:09:34: 20000000 INFO @ Fri, 15 Feb 2019 09:09:39: 20000000 INFO @ Fri, 15 Feb 2019 09:09:40: 21000000 INFO @ Fri, 15 Feb 2019 09:09:40: 20000000 INFO @ Fri, 15 Feb 2019 09:09:45: 21000000 INFO @ Fri, 15 Feb 2019 09:09:46: 22000000 INFO @ Fri, 15 Feb 2019 09:09:47: 21000000 INFO @ Fri, 15 Feb 2019 09:09:51: 23000000 INFO @ Fri, 15 Feb 2019 09:09:51: 22000000 INFO @ Fri, 15 Feb 2019 09:09:53: 22000000 INFO @ Fri, 15 Feb 2019 09:09:57: 24000000 INFO @ Fri, 15 Feb 2019 09:09:58: 23000000 INFO @ Fri, 15 Feb 2019 09:09:59: 23000000 INFO @ Fri, 15 Feb 2019 09:10:03: 25000000 INFO @ Fri, 15 Feb 2019 09:10:04: 24000000 INFO @ Fri, 15 Feb 2019 09:10:05: 24000000 INFO @ Fri, 15 Feb 2019 09:10:08: 26000000 INFO @ Fri, 15 Feb 2019 09:10:10: 25000000 INFO @ Fri, 15 Feb 2019 09:10:12: 25000000 INFO @ Fri, 15 Feb 2019 09:10:14: 27000000 INFO @ Fri, 15 Feb 2019 09:10:16: 26000000 INFO @ Fri, 15 Feb 2019 09:10:18: 26000000 INFO @ Fri, 15 Feb 2019 09:10:20: 28000000 INFO @ Fri, 15 Feb 2019 09:10:23: 27000000 INFO @ Fri, 15 Feb 2019 09:10:24: 27000000 INFO @ Fri, 15 Feb 2019 09:10:25: 29000000 INFO @ Fri, 15 Feb 2019 09:10:29: 28000000 INFO @ Fri, 15 Feb 2019 09:10:30: 28000000 INFO @ Fri, 15 Feb 2019 09:10:31: 30000000 INFO @ Fri, 15 Feb 2019 09:10:35: 29000000 INFO @ Fri, 15 Feb 2019 09:10:37: 29000000 INFO @ Fri, 15 Feb 2019 09:10:37: 31000000 INFO @ Fri, 15 Feb 2019 09:10:41: 30000000 INFO @ Fri, 15 Feb 2019 09:10:43: 30000000 INFO @ Fri, 15 Feb 2019 09:10:43: 32000000 INFO @ Fri, 15 Feb 2019 09:10:47: 31000000 INFO @ Fri, 15 Feb 2019 09:10:49: 31000000 INFO @ Fri, 15 Feb 2019 09:10:49: 33000000 INFO @ Fri, 15 Feb 2019 09:10:54: 32000000 INFO @ Fri, 15 Feb 2019 09:10:55: 32000000 INFO @ Fri, 15 Feb 2019 09:10:55: 34000000 INFO @ Fri, 15 Feb 2019 09:11:00: 33000000 INFO @ Fri, 15 Feb 2019 09:11:01: 33000000 INFO @ Fri, 15 Feb 2019 09:11:01: 35000000 INFO @ Fri, 15 Feb 2019 09:11:06: 34000000 INFO @ Fri, 15 Feb 2019 09:11:06: 34000000 INFO @ Fri, 15 Feb 2019 09:11:07: 36000000 INFO @ Fri, 15 Feb 2019 09:11:12: 35000000 INFO @ Fri, 15 Feb 2019 09:11:12: 35000000 INFO @ Fri, 15 Feb 2019 09:11:12: 37000000 INFO @ Fri, 15 Feb 2019 09:11:18: 36000000 INFO @ Fri, 15 Feb 2019 09:11:18: 36000000 INFO @ Fri, 15 Feb 2019 09:11:18: 38000000 INFO @ Fri, 15 Feb 2019 09:11:24: 37000000 INFO @ Fri, 15 Feb 2019 09:11:24: 37000000 INFO @ Fri, 15 Feb 2019 09:11:24: 39000000 INFO @ Fri, 15 Feb 2019 09:11:29: 38000000 INFO @ Fri, 15 Feb 2019 09:11:30: 40000000 INFO @ Fri, 15 Feb 2019 09:11:30: 38000000 INFO @ Fri, 15 Feb 2019 09:11:35: 41000000 INFO @ Fri, 15 Feb 2019 09:11:35: 39000000 INFO @ Fri, 15 Feb 2019 09:11:36: 39000000 INFO @ Fri, 15 Feb 2019 09:11:41: 42000000 INFO @ Fri, 15 Feb 2019 09:11:41: 40000000 INFO @ Fri, 15 Feb 2019 09:11:42: 40000000 INFO @ Fri, 15 Feb 2019 09:11:46: 43000000 INFO @ Fri, 15 Feb 2019 09:11:47: 41000000 INFO @ Fri, 15 Feb 2019 09:11:49: 41000000 INFO @ Fri, 15 Feb 2019 09:11:52: 44000000 INFO @ Fri, 15 Feb 2019 09:11:53: 42000000 INFO @ Fri, 15 Feb 2019 09:11:55: 42000000 INFO @ Fri, 15 Feb 2019 09:11:58: 45000000 INFO @ Fri, 15 Feb 2019 09:11:59: 43000000 INFO @ Fri, 15 Feb 2019 09:12:01: 43000000 INFO @ Fri, 15 Feb 2019 09:12:04: 46000000 INFO @ Fri, 15 Feb 2019 09:12:05: 44000000 INFO @ Fri, 15 Feb 2019 09:12:07: 44000000 INFO @ Fri, 15 Feb 2019 09:12:10: 47000000 INFO @ Fri, 15 Feb 2019 09:12:11: 45000000 INFO @ Fri, 15 Feb 2019 09:12:13: 45000000 INFO @ Fri, 15 Feb 2019 09:12:16: 48000000 INFO @ Fri, 15 Feb 2019 09:12:17: 46000000 INFO @ Fri, 15 Feb 2019 09:12:19: 46000000 INFO @ Fri, 15 Feb 2019 09:12:22: 49000000 INFO @ Fri, 15 Feb 2019 09:12:23: 47000000 INFO @ Fri, 15 Feb 2019 09:12:25: 47000000 INFO @ Fri, 15 Feb 2019 09:12:28: 50000000 INFO @ Fri, 15 Feb 2019 09:12:28: 48000000 INFO @ Fri, 15 Feb 2019 09:12:31: 48000000 INFO @ Fri, 15 Feb 2019 09:12:34: 51000000 INFO @ Fri, 15 Feb 2019 09:12:34: 49000000 INFO @ Fri, 15 Feb 2019 09:12:37: 49000000 INFO @ Fri, 15 Feb 2019 09:12:39: 52000000 INFO @ Fri, 15 Feb 2019 09:12:40: 50000000 INFO @ Fri, 15 Feb 2019 09:12:43: 50000000 INFO @ Fri, 15 Feb 2019 09:12:45: 53000000 INFO @ Fri, 15 Feb 2019 09:12:46: 51000000 INFO @ Fri, 15 Feb 2019 09:12:49: 51000000 INFO @ Fri, 15 Feb 2019 09:12:51: 54000000 INFO @ Fri, 15 Feb 2019 09:12:52: 52000000 INFO @ Fri, 15 Feb 2019 09:12:56: 52000000 INFO @ Fri, 15 Feb 2019 09:12:56: 55000000 INFO @ Fri, 15 Feb 2019 09:12:58: 53000000 INFO @ Fri, 15 Feb 2019 09:13:02: 53000000 INFO @ Fri, 15 Feb 2019 09:13:02: 56000000 INFO @ Fri, 15 Feb 2019 09:13:04: 54000000 INFO @ Fri, 15 Feb 2019 09:13:08: 57000000 INFO @ Fri, 15 Feb 2019 09:13:08: 54000000 INFO @ Fri, 15 Feb 2019 09:13:09: 55000000 INFO @ Fri, 15 Feb 2019 09:13:13: 58000000 INFO @ Fri, 15 Feb 2019 09:13:14: 55000000 INFO @ Fri, 15 Feb 2019 09:13:15: 56000000 INFO @ Fri, 15 Feb 2019 09:13:19: 59000000 INFO @ Fri, 15 Feb 2019 09:13:20: 56000000 INFO @ Fri, 15 Feb 2019 09:13:21: 57000000 INFO @ Fri, 15 Feb 2019 09:13:25: 60000000 INFO @ Fri, 15 Feb 2019 09:13:26: 57000000 INFO @ Fri, 15 Feb 2019 09:13:27: 58000000 INFO @ Fri, 15 Feb 2019 09:13:31: 61000000 INFO @ Fri, 15 Feb 2019 09:13:32: 58000000 INFO @ Fri, 15 Feb 2019 09:13:33: 59000000 INFO @ Fri, 15 Feb 2019 09:13:37: 62000000 INFO @ Fri, 15 Feb 2019 09:13:38: 59000000 INFO @ Fri, 15 Feb 2019 09:13:39: 60000000 INFO @ Fri, 15 Feb 2019 09:13:43: 63000000 INFO @ Fri, 15 Feb 2019 09:13:45: 60000000 INFO @ Fri, 15 Feb 2019 09:13:45: 61000000 INFO @ Fri, 15 Feb 2019 09:13:50: #1 tag size is determined as 51 bps INFO @ Fri, 15 Feb 2019 09:13:50: #1 tag size = 51 INFO @ Fri, 15 Feb 2019 09:13:50: #1 total tags in treatment: 63988154 INFO @ Fri, 15 Feb 2019 09:13:50: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 09:13:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 09:13:51: 62000000 INFO @ Fri, 15 Feb 2019 09:13:51: 61000000 INFO @ Fri, 15 Feb 2019 09:13:52: #1 tags after filtering in treatment: 63988121 INFO @ Fri, 15 Feb 2019 09:13:52: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 09:13:52: #1 finished! INFO @ Fri, 15 Feb 2019 09:13:52: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 09:13:52: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 09:13:56: 63000000 INFO @ Fri, 15 Feb 2019 09:13:57: #2 number of paired peaks: 7923 INFO @ Fri, 15 Feb 2019 09:13:57: start model_add_line... INFO @ Fri, 15 Feb 2019 09:13:57: 62000000 INFO @ Fri, 15 Feb 2019 09:13:58: start X-correlation... INFO @ Fri, 15 Feb 2019 09:13:58: end of X-cor INFO @ Fri, 15 Feb 2019 09:13:58: #2 finished! INFO @ Fri, 15 Feb 2019 09:13:58: #2 predicted fragment length is 61 bps INFO @ Fri, 15 Feb 2019 09:13:58: #2 alternative fragment length(s) may be 61 bps INFO @ Fri, 15 Feb 2019 09:13:58: #2.2 Generate R script for model : SRX4497206.10_model.r WARNING @ Fri, 15 Feb 2019 09:13:58: #2 Since the d (61) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 09:13:58: #2 You may need to consider one of the other alternative d(s): 61 WARNING @ Fri, 15 Feb 2019 09:13:58: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 09:13:58: #3 Call peaks... INFO @ Fri, 15 Feb 2019 09:13:58: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 09:14:03: #1 tag size is determined as 51 bps INFO @ Fri, 15 Feb 2019 09:14:03: #1 tag size = 51 INFO @ Fri, 15 Feb 2019 09:14:03: #1 total tags in treatment: 63988154 INFO @ Fri, 15 Feb 2019 09:14:03: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 09:14:03: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 09:14:03: 63000000 INFO @ Fri, 15 Feb 2019 09:14:05: #1 tags after filtering in treatment: 63988121 INFO @ Fri, 15 Feb 2019 09:14:05: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 09:14:05: #1 finished! INFO @ Fri, 15 Feb 2019 09:14:05: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 09:14:05: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 09:14:10: #1 tag size is determined as 51 bps INFO @ Fri, 15 Feb 2019 09:14:10: #1 tag size = 51 INFO @ Fri, 15 Feb 2019 09:14:10: #1 total tags in treatment: 63988154 INFO @ Fri, 15 Feb 2019 09:14:10: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 09:14:10: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 09:14:10: #2 number of paired peaks: 7923 INFO @ Fri, 15 Feb 2019 09:14:10: start model_add_line... INFO @ Fri, 15 Feb 2019 09:14:11: start X-correlation... INFO @ Fri, 15 Feb 2019 09:14:11: end of X-cor INFO @ Fri, 15 Feb 2019 09:14:11: #2 finished! INFO @ Fri, 15 Feb 2019 09:14:11: #2 predicted fragment length is 61 bps INFO @ Fri, 15 Feb 2019 09:14:11: #2 alternative fragment length(s) may be 61 bps INFO @ Fri, 15 Feb 2019 09:14:11: #2.2 Generate R script for model : SRX4497206.05_model.r WARNING @ Fri, 15 Feb 2019 09:14:11: #2 Since the d (61) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 09:14:11: #2 You may need to consider one of the other alternative d(s): 61 WARNING @ Fri, 15 Feb 2019 09:14:11: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 09:14:11: #3 Call peaks... INFO @ Fri, 15 Feb 2019 09:14:11: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 09:14:11: #1 tags after filtering in treatment: 63988121 INFO @ Fri, 15 Feb 2019 09:14:11: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 09:14:11: #1 finished! INFO @ Fri, 15 Feb 2019 09:14:11: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 09:14:11: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 09:14:17: #2 number of paired peaks: 7923 INFO @ Fri, 15 Feb 2019 09:14:17: start model_add_line... INFO @ Fri, 15 Feb 2019 09:14:18: start X-correlation... INFO @ Fri, 15 Feb 2019 09:14:18: end of X-cor INFO @ Fri, 15 Feb 2019 09:14:18: #2 finished! INFO @ Fri, 15 Feb 2019 09:14:18: #2 predicted fragment length is 61 bps INFO @ Fri, 15 Feb 2019 09:14:18: #2 alternative fragment length(s) may be 61 bps INFO @ Fri, 15 Feb 2019 09:14:18: #2.2 Generate R script for model : SRX4497206.20_model.r WARNING @ Fri, 15 Feb 2019 09:14:18: #2 Since the d (61) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 09:14:18: #2 You may need to consider one of the other alternative d(s): 61 WARNING @ Fri, 15 Feb 2019 09:14:18: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 09:14:18: #3 Call peaks... INFO @ Fri, 15 Feb 2019 09:14:18: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 09:16:31: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 09:16:49: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 09:16:55: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 09:17:57: #4 Write output xls file... SRX4497206.10_peaks.xls INFO @ Fri, 15 Feb 2019 09:17:57: #4 Write peak in narrowPeak format file... SRX4497206.10_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 09:17:57: #4 Write summits bed file... SRX4497206.10_summits.bed INFO @ Fri, 15 Feb 2019 09:17:57: Done! pass1 - making usageList (50 chroms): 5 millis pass2 - checking and writing primary data (1596 records, 4 fields): 140 millis CompletedMACS2peakCalling INFO @ Fri, 15 Feb 2019 09:18:20: #4 Write output xls file... SRX4497206.20_peaks.xls INFO @ Fri, 15 Feb 2019 09:18:20: #4 Write peak in narrowPeak format file... SRX4497206.20_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 09:18:20: #4 Write summits bed file... SRX4497206.20_summits.bed INFO @ Fri, 15 Feb 2019 09:18:20: Done! pass1 - making usageList (38 chroms): 6 millis pass2 - checking and writing primary data (650 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Fri, 15 Feb 2019 09:18:29: #4 Write output xls file... SRX4497206.05_peaks.xls INFO @ Fri, 15 Feb 2019 09:18:29: #4 Write peak in narrowPeak format file... SRX4497206.05_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 09:18:29: #4 Write summits bed file... SRX4497206.05_summits.bed INFO @ Fri, 15 Feb 2019 09:18:29: Done! pass1 - making usageList (74 chroms): 8 millis pass2 - checking and writing primary data (6882 records, 4 fields): 23 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。