Job ID = 14167012 SRX = SRX9717946 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 23500181 spots for SRR13288850/SRR13288850.sra Written 23500181 spots for SRR13288850/SRR13288850.sra Read 22515107 spots for SRR13288851/SRR13288851.sra Written 22515107 spots for SRR13288851/SRR13288851.sra Read 23665534 spots for SRR13288852/SRR13288852.sra Written 23665534 spots for SRR13288852/SRR13288852.sra Read 22741937 spots for SRR13288853/SRR13288853.sra Written 22741937 spots for SRR13288853/SRR13288853.sra fastq に変換しました。 bowtie でマッピング中... Your job 14167915 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:36:37 92422759 reads; of these: 92422759 (100.00%) were paired; of these: 92410107 (99.99%) aligned concordantly 0 times 9501 (0.01%) aligned concordantly exactly 1 time 3151 (0.00%) aligned concordantly >1 times ---- 92410107 pairs aligned concordantly 0 times; of these: 15182983 (16.43%) aligned discordantly 1 time ---- 77227124 pairs aligned 0 times concordantly or discordantly; of these: 154454248 mates make up the pairs; of these: 42263636 (27.36%) aligned 0 times 54477332 (35.27%) aligned exactly 1 time 57713280 (37.37%) aligned >1 times 77.14% overall alignment rate Time searching: 02:36:37 Overall time: 02:36:37 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 60 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 1142555 / 2922956 = 0.3909 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 12:36:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 12:36:33: #1 read tag files... INFO @ Fri, 10 Dec 2021 12:36:33: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 12:36:53: 1000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 12:37:00: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 12:37:00: #1 read tag files... INFO @ Fri, 10 Dec 2021 12:37:00: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 12:37:11: 1000000 INFO @ Fri, 10 Dec 2021 12:37:14: 2000000 INFO @ Fri, 10 Dec 2021 12:37:21: 2000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 12:37:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 12:37:30: #1 read tag files... INFO @ Fri, 10 Dec 2021 12:37:30: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 12:37:30: 3000000 INFO @ Fri, 10 Dec 2021 12:37:32: 3000000 INFO @ Fri, 10 Dec 2021 12:37:39: 1000000 INFO @ Fri, 10 Dec 2021 12:37:39: 4000000 INFO @ Fri, 10 Dec 2021 12:37:48: 5000000 INFO @ Fri, 10 Dec 2021 12:37:48: 2000000 INFO @ Fri, 10 Dec 2021 12:37:50: 4000000 INFO @ Fri, 10 Dec 2021 12:37:57: 6000000 INFO @ Fri, 10 Dec 2021 12:37:57: 3000000 INFO @ Fri, 10 Dec 2021 12:38:06: 7000000 INFO @ Fri, 10 Dec 2021 12:38:06: 5000000 INFO @ Fri, 10 Dec 2021 12:38:06: 4000000 INFO @ Fri, 10 Dec 2021 12:38:15: 8000000 INFO @ Fri, 10 Dec 2021 12:38:15: 5000000 INFO @ Fri, 10 Dec 2021 12:38:25: 6000000 INFO @ Fri, 10 Dec 2021 12:38:25: 9000000 INFO @ Fri, 10 Dec 2021 12:38:25: 6000000 INFO @ Fri, 10 Dec 2021 12:38:36: 7000000 INFO @ Fri, 10 Dec 2021 12:38:36: 10000000 INFO @ Fri, 10 Dec 2021 12:38:48: 7000000 INFO @ Fri, 10 Dec 2021 12:38:49: 11000000 INFO @ Fri, 10 Dec 2021 12:38:50: 8000000 INFO @ Fri, 10 Dec 2021 12:39:01: 12000000 INFO @ Fri, 10 Dec 2021 12:39:02: 9000000 INFO @ Fri, 10 Dec 2021 12:39:12: 8000000 INFO @ Fri, 10 Dec 2021 12:39:13: 13000000 INFO @ Fri, 10 Dec 2021 12:39:15: 10000000 INFO @ Fri, 10 Dec 2021 12:39:25: 14000000 INFO @ Fri, 10 Dec 2021 12:39:27: 11000000 INFO @ Fri, 10 Dec 2021 12:39:34: 9000000 INFO @ Fri, 10 Dec 2021 12:39:38: 15000000 INFO @ Fri, 10 Dec 2021 12:39:39: 12000000 INFO @ Fri, 10 Dec 2021 12:39:51: 16000000 INFO @ Fri, 10 Dec 2021 12:39:51: 13000000 INFO @ Fri, 10 Dec 2021 12:39:57: 10000000 INFO @ Fri, 10 Dec 2021 12:40:02: 17000000 INFO @ Fri, 10 Dec 2021 12:40:03: 14000000 INFO @ Fri, 10 Dec 2021 12:40:12: 18000000 INFO @ Fri, 10 Dec 2021 12:40:13: 15000000 INFO @ Fri, 10 Dec 2021 12:40:15: 11000000 INFO @ Fri, 10 Dec 2021 12:40:21: 16000000 INFO @ Fri, 10 Dec 2021 12:40:21: 19000000 INFO @ Fri, 10 Dec 2021 12:40:29: 17000000 INFO @ Fri, 10 Dec 2021 12:40:31: 12000000 INFO @ Fri, 10 Dec 2021 12:40:31: 20000000 INFO @ Fri, 10 Dec 2021 12:40:37: 18000000 INFO @ Fri, 10 Dec 2021 12:40:39: 21000000 INFO @ Fri, 10 Dec 2021 12:40:45: 19000000 INFO @ Fri, 10 Dec 2021 12:40:48: 22000000 INFO @ Fri, 10 Dec 2021 12:40:50: 13000000 INFO @ Fri, 10 Dec 2021 12:40:52: 20000000 INFO @ Fri, 10 Dec 2021 12:40:59: 23000000 INFO @ Fri, 10 Dec 2021 12:41:00: 21000000 INFO @ Fri, 10 Dec 2021 12:41:08: 22000000 INFO @ Fri, 10 Dec 2021 12:41:09: 14000000 INFO @ Fri, 10 Dec 2021 12:41:09: 24000000 INFO @ Fri, 10 Dec 2021 12:41:16: 23000000 INFO @ Fri, 10 Dec 2021 12:41:17: 25000000 INFO @ Fri, 10 Dec 2021 12:41:24: 24000000 INFO @ Fri, 10 Dec 2021 12:41:26: 26000000 INFO @ Fri, 10 Dec 2021 12:41:29: 15000000 INFO @ Fri, 10 Dec 2021 12:41:31: 25000000 INFO @ Fri, 10 Dec 2021 12:41:34: 27000000 INFO @ Fri, 10 Dec 2021 12:41:39: 26000000 INFO @ Fri, 10 Dec 2021 12:41:41: 28000000 INFO @ Fri, 10 Dec 2021 12:41:47: 27000000 INFO @ Fri, 10 Dec 2021 12:41:48: 16000000 INFO @ Fri, 10 Dec 2021 12:41:49: 29000000 INFO @ Fri, 10 Dec 2021 12:41:54: 28000000 INFO @ Fri, 10 Dec 2021 12:41:58: 30000000 INFO @ Fri, 10 Dec 2021 12:42:02: 29000000 INFO @ Fri, 10 Dec 2021 12:42:03: 17000000 INFO @ Fri, 10 Dec 2021 12:42:06: 31000000 INFO @ Fri, 10 Dec 2021 12:42:10: 30000000 INFO @ Fri, 10 Dec 2021 12:42:15: 32000000 INFO @ Fri, 10 Dec 2021 12:42:18: 31000000 INFO @ Fri, 10 Dec 2021 12:42:21: 18000000 INFO @ Fri, 10 Dec 2021 12:42:24: 33000000 INFO @ Fri, 10 Dec 2021 12:42:26: 32000000 INFO @ Fri, 10 Dec 2021 12:42:33: 34000000 INFO @ Fri, 10 Dec 2021 12:42:34: 33000000 INFO @ Fri, 10 Dec 2021 12:42:39: 19000000 INFO @ Fri, 10 Dec 2021 12:42:41: 35000000 INFO @ Fri, 10 Dec 2021 12:42:42: 34000000 INFO @ Fri, 10 Dec 2021 12:42:49: 36000000 INFO @ Fri, 10 Dec 2021 12:42:49: 35000000 INFO @ Fri, 10 Dec 2021 12:42:54: 20000000 INFO @ Fri, 10 Dec 2021 12:42:57: 37000000 INFO @ Fri, 10 Dec 2021 12:42:57: 36000000 INFO @ Fri, 10 Dec 2021 12:43:05: 37000000 INFO @ Fri, 10 Dec 2021 12:43:05: 38000000 INFO @ Fri, 10 Dec 2021 12:43:10: 21000000 INFO @ Fri, 10 Dec 2021 12:43:12: 38000000 INFO @ Fri, 10 Dec 2021 12:43:12: 39000000 INFO @ Fri, 10 Dec 2021 12:43:19: 39000000 INFO @ Fri, 10 Dec 2021 12:43:20: 40000000 INFO @ Fri, 10 Dec 2021 12:43:26: 22000000 INFO @ Fri, 10 Dec 2021 12:43:27: 41000000 INFO @ Fri, 10 Dec 2021 12:43:28: 40000000 INFO @ Fri, 10 Dec 2021 12:43:35: 41000000 INFO @ Fri, 10 Dec 2021 12:43:36: 42000000 INFO @ Fri, 10 Dec 2021 12:43:42: 42000000 INFO @ Fri, 10 Dec 2021 12:43:44: 23000000 INFO @ Fri, 10 Dec 2021 12:43:44: 43000000 INFO @ Fri, 10 Dec 2021 12:43:50: 43000000 INFO @ Fri, 10 Dec 2021 12:43:53: 44000000 INFO @ Fri, 10 Dec 2021 12:43:57: 44000000 INFO @ Fri, 10 Dec 2021 12:44:01: 24000000 INFO @ Fri, 10 Dec 2021 12:44:01: 45000000 INFO @ Fri, 10 Dec 2021 12:44:05: 45000000 INFO @ Fri, 10 Dec 2021 12:44:10: 46000000 INFO @ Fri, 10 Dec 2021 12:44:13: 46000000 INFO @ Fri, 10 Dec 2021 12:44:17: 25000000 INFO @ Fri, 10 Dec 2021 12:44:19: 47000000 INFO @ Fri, 10 Dec 2021 12:44:20: 47000000 INFO @ Fri, 10 Dec 2021 12:44:26: 48000000 INFO @ Fri, 10 Dec 2021 12:44:27: 48000000 INFO @ Fri, 10 Dec 2021 12:44:34: 26000000 INFO @ Fri, 10 Dec 2021 12:44:35: 49000000 INFO @ Fri, 10 Dec 2021 12:44:35: 49000000 INFO @ Fri, 10 Dec 2021 12:44:42: 50000000 INFO @ Fri, 10 Dec 2021 12:44:43: 50000000 INFO @ Fri, 10 Dec 2021 12:44:50: 51000000 INFO @ Fri, 10 Dec 2021 12:44:50: 27000000 INFO @ Fri, 10 Dec 2021 12:44:51: 51000000 INFO @ Fri, 10 Dec 2021 12:44:57: 52000000 INFO @ Fri, 10 Dec 2021 12:45:00: 52000000 INFO @ Fri, 10 Dec 2021 12:45:04: 53000000 INFO @ Fri, 10 Dec 2021 12:45:08: 53000000 INFO @ Fri, 10 Dec 2021 12:45:08: 28000000 INFO @ Fri, 10 Dec 2021 12:45:12: 54000000 INFO @ Fri, 10 Dec 2021 12:45:17: 54000000 INFO @ Fri, 10 Dec 2021 12:45:19: 55000000 INFO @ Fri, 10 Dec 2021 12:45:23: 29000000 INFO @ Fri, 10 Dec 2021 12:45:26: 55000000 INFO @ Fri, 10 Dec 2021 12:45:27: 56000000 INFO @ Fri, 10 Dec 2021 12:45:35: 57000000 INFO @ Fri, 10 Dec 2021 12:45:35: 56000000 INFO @ Fri, 10 Dec 2021 12:45:40: 30000000 INFO @ Fri, 10 Dec 2021 12:45:42: 58000000 INFO @ Fri, 10 Dec 2021 12:45:43: 57000000 INFO @ Fri, 10 Dec 2021 12:45:50: 59000000 INFO @ Fri, 10 Dec 2021 12:45:52: 58000000 INFO @ Fri, 10 Dec 2021 12:45:58: 60000000 INFO @ Fri, 10 Dec 2021 12:45:59: 31000000 INFO @ Fri, 10 Dec 2021 12:46:00: 59000000 INFO @ Fri, 10 Dec 2021 12:46:05: 61000000 INFO @ Fri, 10 Dec 2021 12:46:09: 60000000 INFO @ Fri, 10 Dec 2021 12:46:13: 62000000 INFO @ Fri, 10 Dec 2021 12:46:18: 61000000 INFO @ Fri, 10 Dec 2021 12:46:19: 32000000 INFO @ Fri, 10 Dec 2021 12:46:19: 63000000 INFO @ Fri, 10 Dec 2021 12:46:26: 62000000 INFO @ Fri, 10 Dec 2021 12:46:27: 64000000 INFO @ Fri, 10 Dec 2021 12:46:34: 65000000 INFO @ Fri, 10 Dec 2021 12:46:34: 63000000 INFO @ Fri, 10 Dec 2021 12:46:38: 33000000 INFO @ Fri, 10 Dec 2021 12:46:41: 66000000 INFO @ Fri, 10 Dec 2021 12:46:42: 64000000 INFO @ Fri, 10 Dec 2021 12:46:48: 67000000 INFO @ Fri, 10 Dec 2021 12:46:51: 65000000 INFO @ Fri, 10 Dec 2021 12:46:55: 68000000 INFO @ Fri, 10 Dec 2021 12:46:56: 34000000 INFO @ Fri, 10 Dec 2021 12:46:59: 66000000 INFO @ Fri, 10 Dec 2021 12:47:03: 69000000 INFO @ Fri, 10 Dec 2021 12:47:07: 67000000 INFO @ Fri, 10 Dec 2021 12:47:10: 70000000 INFO @ Fri, 10 Dec 2021 12:47:12: 35000000 INFO @ Fri, 10 Dec 2021 12:47:16: 68000000 INFO @ Fri, 10 Dec 2021 12:47:17: 71000000 INFO @ Fri, 10 Dec 2021 12:47:24: 69000000 INFO @ Fri, 10 Dec 2021 12:47:25: 72000000 INFO @ Fri, 10 Dec 2021 12:47:31: 36000000 INFO @ Fri, 10 Dec 2021 12:47:32: 73000000 INFO @ Fri, 10 Dec 2021 12:47:33: 70000000 INFO @ Fri, 10 Dec 2021 12:47:40: 74000000 INFO @ Fri, 10 Dec 2021 12:47:41: 71000000 INFO @ Fri, 10 Dec 2021 12:47:47: 75000000 INFO @ Fri, 10 Dec 2021 12:47:47: 37000000 INFO @ Fri, 10 Dec 2021 12:47:49: 72000000 INFO @ Fri, 10 Dec 2021 12:47:55: 76000000 INFO @ Fri, 10 Dec 2021 12:47:57: 73000000 INFO @ Fri, 10 Dec 2021 12:48:02: 77000000 INFO @ Fri, 10 Dec 2021 12:48:04: 38000000 INFO @ Fri, 10 Dec 2021 12:48:05: 74000000 INFO @ Fri, 10 Dec 2021 12:48:09: 78000000 INFO @ Fri, 10 Dec 2021 12:48:13: 75000000 INFO @ Fri, 10 Dec 2021 12:48:16: 79000000 INFO @ Fri, 10 Dec 2021 12:48:19: 39000000 INFO @ Fri, 10 Dec 2021 12:48:22: 76000000 INFO @ Fri, 10 Dec 2021 12:48:23: 80000000 INFO @ Fri, 10 Dec 2021 12:48:30: 77000000 INFO @ Fri, 10 Dec 2021 12:48:31: 81000000 INFO @ Fri, 10 Dec 2021 12:48:35: 40000000 INFO @ Fri, 10 Dec 2021 12:48:38: 78000000 INFO @ Fri, 10 Dec 2021 12:48:38: 82000000 INFO @ Fri, 10 Dec 2021 12:48:46: 79000000 INFO @ Fri, 10 Dec 2021 12:48:46: 83000000 INFO @ Fri, 10 Dec 2021 12:48:52: 41000000 INFO @ Fri, 10 Dec 2021 12:48:54: 80000000 INFO @ Fri, 10 Dec 2021 12:48:54: 84000000 INFO @ Fri, 10 Dec 2021 12:49:02: 81000000 INFO @ Fri, 10 Dec 2021 12:49:02: 85000000 INFO @ Fri, 10 Dec 2021 12:49:09: 86000000 INFO @ Fri, 10 Dec 2021 12:49:10: 82000000 INFO @ Fri, 10 Dec 2021 12:49:12: 42000000 INFO @ Fri, 10 Dec 2021 12:49:17: 87000000 INFO @ Fri, 10 Dec 2021 12:49:18: 83000000 INFO @ Fri, 10 Dec 2021 12:49:25: 88000000 INFO @ Fri, 10 Dec 2021 12:49:26: 84000000 INFO @ Fri, 10 Dec 2021 12:49:30: 43000000 INFO @ Fri, 10 Dec 2021 12:49:33: 89000000 INFO @ Fri, 10 Dec 2021 12:49:34: 85000000 INFO @ Fri, 10 Dec 2021 12:49:41: 90000000 INFO @ Fri, 10 Dec 2021 12:49:42: 86000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 12:49:48: 44000000 INFO @ Fri, 10 Dec 2021 12:49:48: 91000000 INFO @ Fri, 10 Dec 2021 12:49:50: 87000000 INFO @ Fri, 10 Dec 2021 12:49:56: 92000000 INFO @ Fri, 10 Dec 2021 12:49:58: 88000000 INFO @ Fri, 10 Dec 2021 12:50:04: 93000000 INFO @ Fri, 10 Dec 2021 12:50:05: 45000000 INFO @ Fri, 10 Dec 2021 12:50:06: 89000000 INFO @ Fri, 10 Dec 2021 12:50:12: 94000000 INFO @ Fri, 10 Dec 2021 12:50:14: 90000000 INFO @ Fri, 10 Dec 2021 12:50:17: 46000000 INFO @ Fri, 10 Dec 2021 12:50:19: 95000000 INFO @ Fri, 10 Dec 2021 12:50:24: 91000000 INFO @ Fri, 10 Dec 2021 12:50:27: 96000000 INFO @ Fri, 10 Dec 2021 12:50:32: 92000000 INFO @ Fri, 10 Dec 2021 12:50:35: 47000000 INFO @ Fri, 10 Dec 2021 12:50:35: 97000000 INFO @ Fri, 10 Dec 2021 12:50:41: 93000000 INFO @ Fri, 10 Dec 2021 12:50:43: 98000000 INFO @ Fri, 10 Dec 2021 12:50:50: 94000000 INFO @ Fri, 10 Dec 2021 12:50:50: 99000000 INFO @ Fri, 10 Dec 2021 12:50:51: 48000000 INFO @ Fri, 10 Dec 2021 12:50:58: 100000000 INFO @ Fri, 10 Dec 2021 12:50:59: 95000000 INFO @ Fri, 10 Dec 2021 12:51:06: 101000000 INFO @ Fri, 10 Dec 2021 12:51:07: 49000000 INFO @ Fri, 10 Dec 2021 12:51:08: 96000000 INFO @ Fri, 10 Dec 2021 12:51:13: 102000000 INFO @ Fri, 10 Dec 2021 12:51:17: 97000000 INFO @ Fri, 10 Dec 2021 12:51:21: 103000000 INFO @ Fri, 10 Dec 2021 12:51:25: 50000000 INFO @ Fri, 10 Dec 2021 12:51:25: 98000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 12:51:29: 104000000 INFO @ Fri, 10 Dec 2021 12:51:34: 99000000 INFO @ Fri, 10 Dec 2021 12:51:37: 105000000 INFO @ Fri, 10 Dec 2021 12:51:38: 51000000 INFO @ Fri, 10 Dec 2021 12:51:43: 100000000 INFO @ Fri, 10 Dec 2021 12:51:44: 106000000 INFO @ Fri, 10 Dec 2021 12:51:50: 52000000 INFO @ Fri, 10 Dec 2021 12:51:50: 101000000 INFO @ Fri, 10 Dec 2021 12:51:52: 107000000 INFO @ Fri, 10 Dec 2021 12:51:59: 102000000 INFO @ Fri, 10 Dec 2021 12:52:00: 108000000 INFO @ Fri, 10 Dec 2021 12:52:03: 53000000 INFO @ Fri, 10 Dec 2021 12:52:07: 103000000 INFO @ Fri, 10 Dec 2021 12:52:07: 109000000 INFO @ Fri, 10 Dec 2021 12:52:15: 110000000 INFO @ Fri, 10 Dec 2021 12:52:15: 104000000 INFO @ Fri, 10 Dec 2021 12:52:18: 54000000 INFO @ Fri, 10 Dec 2021 12:52:23: 111000000 INFO @ Fri, 10 Dec 2021 12:52:24: 105000000 INFO @ Fri, 10 Dec 2021 12:52:30: 112000000 INFO @ Fri, 10 Dec 2021 12:52:32: 55000000 INFO @ Fri, 10 Dec 2021 12:52:32: 106000000 INFO @ Fri, 10 Dec 2021 12:52:38: 113000000 INFO @ Fri, 10 Dec 2021 12:52:40: 107000000 INFO @ Fri, 10 Dec 2021 12:52:46: 114000000 INFO @ Fri, 10 Dec 2021 12:52:48: 56000000 INFO @ Fri, 10 Dec 2021 12:52:49: 108000000 INFO @ Fri, 10 Dec 2021 12:52:55: 115000000 INFO @ Fri, 10 Dec 2021 12:52:57: 109000000 INFO @ Fri, 10 Dec 2021 12:53:03: 116000000 INFO @ Fri, 10 Dec 2021 12:53:04: 57000000 INFO @ Fri, 10 Dec 2021 12:53:05: 110000000 INFO @ Fri, 10 Dec 2021 12:53:11: 117000000 INFO @ Fri, 10 Dec 2021 12:53:13: 111000000 INFO @ Fri, 10 Dec 2021 12:53:19: 118000000 INFO @ Fri, 10 Dec 2021 12:53:22: 58000000 INFO @ Fri, 10 Dec 2021 12:53:22: 112000000 INFO @ Fri, 10 Dec 2021 12:53:27: 119000000 INFO @ Fri, 10 Dec 2021 12:53:31: 113000000 INFO @ Fri, 10 Dec 2021 12:53:34: 120000000 INFO @ Fri, 10 Dec 2021 12:53:39: 59000000 INFO @ Fri, 10 Dec 2021 12:53:40: 114000000 INFO @ Fri, 10 Dec 2021 12:53:42: 121000000 INFO @ Fri, 10 Dec 2021 12:53:49: 115000000 INFO @ Fri, 10 Dec 2021 12:53:49: 122000000 INFO @ Fri, 10 Dec 2021 12:53:55: 60000000 INFO @ Fri, 10 Dec 2021 12:53:57: 123000000 INFO @ Fri, 10 Dec 2021 12:53:58: 116000000 INFO @ Fri, 10 Dec 2021 12:54:05: 124000000 INFO @ Fri, 10 Dec 2021 12:54:07: 117000000 INFO @ Fri, 10 Dec 2021 12:54:10: 61000000 INFO @ Fri, 10 Dec 2021 12:54:14: 125000000 INFO @ Fri, 10 Dec 2021 12:54:17: 118000000 INFO @ Fri, 10 Dec 2021 12:54:22: 126000000 INFO @ Fri, 10 Dec 2021 12:54:24: 62000000 INFO @ Fri, 10 Dec 2021 12:54:25: 119000000 INFO @ Fri, 10 Dec 2021 12:54:29: 127000000 INFO @ Fri, 10 Dec 2021 12:54:32: 120000000 INFO @ Fri, 10 Dec 2021 12:54:37: 128000000 INFO @ Fri, 10 Dec 2021 12:54:39: 63000000 INFO @ Fri, 10 Dec 2021 12:54:40: 121000000 INFO @ Fri, 10 Dec 2021 12:54:45: 129000000 INFO @ Fri, 10 Dec 2021 12:54:48: 122000000 INFO @ Fri, 10 Dec 2021 12:54:53: 130000000 INFO @ Fri, 10 Dec 2021 12:54:55: 64000000 INFO @ Fri, 10 Dec 2021 12:54:55: 123000000 INFO @ Fri, 10 Dec 2021 12:55:00: 131000000 INFO @ Fri, 10 Dec 2021 12:55:03: 124000000 INFO @ Fri, 10 Dec 2021 12:55:08: 132000000 INFO @ Fri, 10 Dec 2021 12:55:10: 65000000 INFO @ Fri, 10 Dec 2021 12:55:11: 125000000 INFO @ Fri, 10 Dec 2021 12:55:16: 133000000 INFO @ Fri, 10 Dec 2021 12:55:19: 126000000 INFO @ Fri, 10 Dec 2021 12:55:24: 134000000 INFO @ Fri, 10 Dec 2021 12:55:26: 66000000 INFO @ Fri, 10 Dec 2021 12:55:27: 127000000 INFO @ Fri, 10 Dec 2021 12:55:32: 135000000 INFO @ Fri, 10 Dec 2021 12:55:35: 128000000 INFO @ Fri, 10 Dec 2021 12:55:40: 136000000 INFO @ Fri, 10 Dec 2021 12:55:43: 67000000 INFO @ Fri, 10 Dec 2021 12:55:43: 129000000 INFO @ Fri, 10 Dec 2021 12:55:47: 137000000 INFO @ Fri, 10 Dec 2021 12:55:51: 130000000 INFO @ Fri, 10 Dec 2021 12:55:55: 138000000 INFO @ Fri, 10 Dec 2021 12:55:59: 131000000 INFO @ Fri, 10 Dec 2021 12:55:59: 68000000 INFO @ Fri, 10 Dec 2021 12:56:03: 139000000 INFO @ Fri, 10 Dec 2021 12:56:10: 132000000 INFO @ Fri, 10 Dec 2021 12:56:10: 69000000 INFO @ Fri, 10 Dec 2021 12:56:10: 140000000 INFO @ Fri, 10 Dec 2021 12:56:12: #1 tag size is determined as 64 bps INFO @ Fri, 10 Dec 2021 12:56:12: #1 tag size = 64 INFO @ Fri, 10 Dec 2021 12:56:12: #1 total tags in treatment: 9237 INFO @ Fri, 10 Dec 2021 12:56:12: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 12:56:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 12:56:12: #1 tags after filtering in treatment: 8972 INFO @ Fri, 10 Dec 2021 12:56:12: #1 Redundant rate of treatment: 0.03 INFO @ Fri, 10 Dec 2021 12:56:12: #1 finished! INFO @ Fri, 10 Dec 2021 12:56:12: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 12:56:12: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 12:56:12: #2 number of paired peaks: 105 WARNING @ Fri, 10 Dec 2021 12:56:12: Fewer paired peaks (105) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 105 pairs to build model! INFO @ Fri, 10 Dec 2021 12:56:12: start model_add_line... INFO @ Fri, 10 Dec 2021 12:56:12: start X-correlation... INFO @ Fri, 10 Dec 2021 12:56:13: end of X-cor INFO @ Fri, 10 Dec 2021 12:56:13: #2 finished! INFO @ Fri, 10 Dec 2021 12:56:13: #2 predicted fragment length is 144 bps INFO @ Fri, 10 Dec 2021 12:56:13: #2 alternative fragment length(s) may be 27,54,95,118,144,187,198,202,230,245,271,293,334,366,422,447,466,486,523,553 bps INFO @ Fri, 10 Dec 2021 12:56:13: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.20_model.r INFO @ Fri, 10 Dec 2021 12:56:13: #3 Call peaks... INFO @ Fri, 10 Dec 2021 12:56:13: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 12:56:13: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 12:56:13: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.20_peaks.xls INFO @ Fri, 10 Dec 2021 12:56:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 12:56:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.20_summits.bed INFO @ Fri, 10 Dec 2021 12:56:14: Done! pass1 - making usageList (1 chroms): 1 millis pass2 - checking and writing primary data (1 records, 4 fields): 88 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 12:56:19: 133000000 INFO @ Fri, 10 Dec 2021 12:56:26: 70000000 INFO @ Fri, 10 Dec 2021 12:56:27: 134000000 INFO @ Fri, 10 Dec 2021 12:56:35: 135000000 INFO @ Fri, 10 Dec 2021 12:56:41: 71000000 INFO @ Fri, 10 Dec 2021 12:56:43: 136000000 INFO @ Fri, 10 Dec 2021 12:56:50: 137000000 INFO @ Fri, 10 Dec 2021 12:56:56: 72000000 INFO @ Fri, 10 Dec 2021 12:56:58: 138000000 INFO @ Fri, 10 Dec 2021 12:57:06: 139000000 INFO @ Fri, 10 Dec 2021 12:57:12: 73000000 INFO @ Fri, 10 Dec 2021 12:57:14: 140000000 INFO @ Fri, 10 Dec 2021 12:57:15: #1 tag size is determined as 64 bps INFO @ Fri, 10 Dec 2021 12:57:15: #1 tag size = 64 INFO @ Fri, 10 Dec 2021 12:57:15: #1 total tags in treatment: 9237 INFO @ Fri, 10 Dec 2021 12:57:15: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 12:57:15: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 12:57:15: #1 tags after filtering in treatment: 8972 INFO @ Fri, 10 Dec 2021 12:57:15: #1 Redundant rate of treatment: 0.03 INFO @ Fri, 10 Dec 2021 12:57:15: #1 finished! INFO @ Fri, 10 Dec 2021 12:57:15: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 12:57:15: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 12:57:15: #2 number of paired peaks: 105 WARNING @ Fri, 10 Dec 2021 12:57:15: Fewer paired peaks (105) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 105 pairs to build model! INFO @ Fri, 10 Dec 2021 12:57:15: start model_add_line... INFO @ Fri, 10 Dec 2021 12:57:15: start X-correlation... INFO @ Fri, 10 Dec 2021 12:57:15: end of X-cor INFO @ Fri, 10 Dec 2021 12:57:15: #2 finished! INFO @ Fri, 10 Dec 2021 12:57:15: #2 predicted fragment length is 144 bps INFO @ Fri, 10 Dec 2021 12:57:15: #2 alternative fragment length(s) may be 27,54,95,118,144,187,198,202,230,245,271,293,334,366,422,447,466,486,523,553 bps INFO @ Fri, 10 Dec 2021 12:57:15: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.10_model.r INFO @ Fri, 10 Dec 2021 12:57:15: #3 Call peaks... INFO @ Fri, 10 Dec 2021 12:57:15: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 12:57:16: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 12:57:16: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.10_peaks.xls INFO @ Fri, 10 Dec 2021 12:57:16: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 12:57:16: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.10_summits.bed INFO @ Fri, 10 Dec 2021 12:57:16: Done! pass1 - making usageList (1 chroms): 1 millis pass2 - checking and writing primary data (1 records, 4 fields): 4 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 12:57:28: 74000000 INFO @ Fri, 10 Dec 2021 12:57:42: 75000000 INFO @ Fri, 10 Dec 2021 12:57:56: 76000000 INFO @ Fri, 10 Dec 2021 12:58:09: 77000000 INFO @ Fri, 10 Dec 2021 12:58:23: 78000000 INFO @ Fri, 10 Dec 2021 12:58:39: 79000000 INFO @ Fri, 10 Dec 2021 12:58:56: 80000000 INFO @ Fri, 10 Dec 2021 12:59:13: 81000000 INFO @ Fri, 10 Dec 2021 12:59:31: 82000000 INFO @ Fri, 10 Dec 2021 12:59:48: 83000000 INFO @ Fri, 10 Dec 2021 13:00:06: 84000000 INFO @ Fri, 10 Dec 2021 13:00:22: 85000000 INFO @ Fri, 10 Dec 2021 13:00:39: 86000000 INFO @ Fri, 10 Dec 2021 13:00:55: 87000000 INFO @ Fri, 10 Dec 2021 13:01:15: 88000000 INFO @ Fri, 10 Dec 2021 13:01:35: 89000000 INFO @ Fri, 10 Dec 2021 13:01:54: 90000000 INFO @ Fri, 10 Dec 2021 13:02:11: 91000000 INFO @ Fri, 10 Dec 2021 13:02:27: 92000000 INFO @ Fri, 10 Dec 2021 13:02:44: 93000000 INFO @ Fri, 10 Dec 2021 13:03:00: 94000000 INFO @ Fri, 10 Dec 2021 13:03:14: 95000000 INFO @ Fri, 10 Dec 2021 13:03:29: 96000000 INFO @ Fri, 10 Dec 2021 13:03:43: 97000000 INFO @ Fri, 10 Dec 2021 13:03:59: 98000000 INFO @ Fri, 10 Dec 2021 13:04:13: 99000000 INFO @ Fri, 10 Dec 2021 13:04:26: 100000000 INFO @ Fri, 10 Dec 2021 13:04:42: 101000000 INFO @ Fri, 10 Dec 2021 13:05:01: 102000000 INFO @ Fri, 10 Dec 2021 13:05:20: 103000000 INFO @ Fri, 10 Dec 2021 13:05:37: 104000000 INFO @ Fri, 10 Dec 2021 13:05:50: 105000000 INFO @ Fri, 10 Dec 2021 13:06:06: 106000000 INFO @ Fri, 10 Dec 2021 13:06:21: 107000000 INFO @ Fri, 10 Dec 2021 13:06:35: 108000000 INFO @ Fri, 10 Dec 2021 13:06:47: 109000000 INFO @ Fri, 10 Dec 2021 13:07:04: 110000000 INFO @ Fri, 10 Dec 2021 13:07:18: 111000000 INFO @ Fri, 10 Dec 2021 13:07:34: 112000000 INFO @ Fri, 10 Dec 2021 13:07:50: 113000000 INFO @ Fri, 10 Dec 2021 13:08:07: 114000000 INFO @ Fri, 10 Dec 2021 13:08:25: 115000000 INFO @ Fri, 10 Dec 2021 13:08:43: 116000000 INFO @ Fri, 10 Dec 2021 13:09:01: 117000000 INFO @ Fri, 10 Dec 2021 13:09:19: 118000000 INFO @ Fri, 10 Dec 2021 13:09:37: 119000000 INFO @ Fri, 10 Dec 2021 13:09:54: 120000000 INFO @ Fri, 10 Dec 2021 13:10:11: 121000000 INFO @ Fri, 10 Dec 2021 13:10:29: 122000000 INFO @ Fri, 10 Dec 2021 13:10:49: 123000000 INFO @ Fri, 10 Dec 2021 13:11:13: 124000000 INFO @ Fri, 10 Dec 2021 13:11:27: 125000000 INFO @ Fri, 10 Dec 2021 13:11:44: 126000000 INFO @ Fri, 10 Dec 2021 13:12:02: 127000000 INFO @ Fri, 10 Dec 2021 13:12:19: 128000000 INFO @ Fri, 10 Dec 2021 13:12:35: 129000000 INFO @ Fri, 10 Dec 2021 13:12:49: 130000000 INFO @ Fri, 10 Dec 2021 13:13:05: 131000000 INFO @ Fri, 10 Dec 2021 13:13:21: 132000000 INFO @ Fri, 10 Dec 2021 13:13:35: 133000000 INFO @ Fri, 10 Dec 2021 13:13:51: 134000000 INFO @ Fri, 10 Dec 2021 13:14:07: 135000000 INFO @ Fri, 10 Dec 2021 13:14:24: 136000000 INFO @ Fri, 10 Dec 2021 13:14:39: 137000000 INFO @ Fri, 10 Dec 2021 13:14:54: 138000000 INFO @ Fri, 10 Dec 2021 13:15:12: 139000000 INFO @ Fri, 10 Dec 2021 13:15:29: 140000000 INFO @ Fri, 10 Dec 2021 13:15:33: #1 tag size is determined as 64 bps INFO @ Fri, 10 Dec 2021 13:15:33: #1 tag size = 64 INFO @ Fri, 10 Dec 2021 13:15:33: #1 total tags in treatment: 9237 INFO @ Fri, 10 Dec 2021 13:15:33: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 13:15:33: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 13:15:33: #1 tags after filtering in treatment: 8972 INFO @ Fri, 10 Dec 2021 13:15:33: #1 Redundant rate of treatment: 0.03 INFO @ Fri, 10 Dec 2021 13:15:33: #1 finished! INFO @ Fri, 10 Dec 2021 13:15:33: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 13:15:33: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 13:15:33: #2 number of paired peaks: 105 WARNING @ Fri, 10 Dec 2021 13:15:33: Fewer paired peaks (105) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 105 pairs to build model! INFO @ Fri, 10 Dec 2021 13:15:33: start model_add_line... INFO @ Fri, 10 Dec 2021 13:15:33: start X-correlation... INFO @ Fri, 10 Dec 2021 13:15:33: end of X-cor INFO @ Fri, 10 Dec 2021 13:15:33: #2 finished! INFO @ Fri, 10 Dec 2021 13:15:33: #2 predicted fragment length is 144 bps INFO @ Fri, 10 Dec 2021 13:15:33: #2 alternative fragment length(s) may be 27,54,95,118,144,187,198,202,230,245,271,293,334,366,422,447,466,486,523,553 bps INFO @ Fri, 10 Dec 2021 13:15:33: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.05_model.r INFO @ Fri, 10 Dec 2021 13:15:33: #3 Call peaks... INFO @ Fri, 10 Dec 2021 13:15:33: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 13:15:33: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 13:15:33: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.05_peaks.xls INFO @ Fri, 10 Dec 2021 13:15:33: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 13:15:33: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9717946/SRX9717946.05_summits.bed INFO @ Fri, 10 Dec 2021 13:15:33: Done! pass1 - making usageList (1 chroms): 2 millis pass2 - checking and writing primary data (4 records, 4 fields): 84 millis CompletedMACS2peakCalling