Job ID = 14166995 SRX = SRX9717929 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 37764915 spots for SRR13288676/SRR13288676.sra Written 37764915 spots for SRR13288676/SRR13288676.sra Read 36293874 spots for SRR13288677/SRR13288677.sra Written 36293874 spots for SRR13288677/SRR13288677.sra Read 38097052 spots for SRR13288678/SRR13288678.sra Written 38097052 spots for SRR13288678/SRR13288678.sra Read 36759359 spots for SRR13288679/SRR13288679.sra Written 36759359 spots for SRR13288679/SRR13288679.sra fastq に変換しました。 bowtie でマッピング中... Your job 14167914 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:49:12 148915200 reads; of these: 148915200 (100.00%) were paired; of these: 148892508 (99.98%) aligned concordantly 0 times 12355 (0.01%) aligned concordantly exactly 1 time 10337 (0.01%) aligned concordantly >1 times ---- 148892508 pairs aligned concordantly 0 times; of these: 18163216 (12.20%) aligned discordantly 1 time ---- 130729292 pairs aligned 0 times concordantly or discordantly; of these: 261458584 mates make up the pairs; of these: 96009816 (36.72%) aligned 0 times 74607822 (28.54%) aligned exactly 1 time 90840946 (34.74%) aligned >1 times 67.76% overall alignment rate Time searching: 02:49:12 Overall time: 02:49:12 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 80 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 2125479 / 3371342 = 0.6305 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 12:21:29: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 12:21:29: #1 read tag files... INFO @ Fri, 10 Dec 2021 12:21:29: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 12:21:33: 1000000 INFO @ Fri, 10 Dec 2021 12:21:37: 2000000 INFO @ Fri, 10 Dec 2021 12:21:41: 3000000 INFO @ Fri, 10 Dec 2021 12:21:45: 4000000 INFO @ Fri, 10 Dec 2021 12:21:49: 5000000 INFO @ Fri, 10 Dec 2021 12:21:52: 6000000 INFO @ Fri, 10 Dec 2021 12:21:56: 7000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 12:21:59: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 12:21:59: #1 read tag files... INFO @ Fri, 10 Dec 2021 12:21:59: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 12:22:00: 8000000 INFO @ Fri, 10 Dec 2021 12:22:04: 1000000 INFO @ Fri, 10 Dec 2021 12:22:05: 9000000 INFO @ Fri, 10 Dec 2021 12:22:09: 10000000 INFO @ Fri, 10 Dec 2021 12:22:09: 2000000 INFO @ Fri, 10 Dec 2021 12:22:13: 11000000 INFO @ Fri, 10 Dec 2021 12:22:14: 3000000 INFO @ Fri, 10 Dec 2021 12:22:17: 12000000 INFO @ Fri, 10 Dec 2021 12:22:19: 4000000 INFO @ Fri, 10 Dec 2021 12:22:21: 13000000 INFO @ Fri, 10 Dec 2021 12:22:24: 5000000 INFO @ Fri, 10 Dec 2021 12:22:26: 14000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 12:22:29: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 12:22:29: #1 read tag files... INFO @ Fri, 10 Dec 2021 12:22:29: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 12:22:29: 6000000 INFO @ Fri, 10 Dec 2021 12:22:30: 15000000 INFO @ Fri, 10 Dec 2021 12:22:34: 1000000 INFO @ Fri, 10 Dec 2021 12:22:34: 16000000 INFO @ Fri, 10 Dec 2021 12:22:34: 7000000 INFO @ Fri, 10 Dec 2021 12:22:39: 17000000 INFO @ Fri, 10 Dec 2021 12:22:39: 2000000 INFO @ Fri, 10 Dec 2021 12:22:40: 8000000 INFO @ Fri, 10 Dec 2021 12:22:43: 18000000 INFO @ Fri, 10 Dec 2021 12:22:44: 3000000 INFO @ Fri, 10 Dec 2021 12:22:44: 9000000 INFO @ Fri, 10 Dec 2021 12:22:47: 19000000 INFO @ Fri, 10 Dec 2021 12:22:49: 4000000 INFO @ Fri, 10 Dec 2021 12:22:49: 10000000 INFO @ Fri, 10 Dec 2021 12:22:51: 20000000 INFO @ Fri, 10 Dec 2021 12:22:54: 5000000 INFO @ Fri, 10 Dec 2021 12:22:55: 11000000 INFO @ Fri, 10 Dec 2021 12:22:56: 21000000 INFO @ Fri, 10 Dec 2021 12:22:59: 6000000 INFO @ Fri, 10 Dec 2021 12:23:00: 12000000 INFO @ Fri, 10 Dec 2021 12:23:00: 22000000 INFO @ Fri, 10 Dec 2021 12:23:04: 23000000 INFO @ Fri, 10 Dec 2021 12:23:04: 7000000 INFO @ Fri, 10 Dec 2021 12:23:05: 13000000 INFO @ Fri, 10 Dec 2021 12:23:08: 24000000 INFO @ Fri, 10 Dec 2021 12:23:09: 8000000 INFO @ Fri, 10 Dec 2021 12:23:10: 14000000 INFO @ Fri, 10 Dec 2021 12:23:12: 25000000 INFO @ Fri, 10 Dec 2021 12:23:14: 9000000 INFO @ Fri, 10 Dec 2021 12:23:15: 15000000 INFO @ Fri, 10 Dec 2021 12:23:17: 26000000 INFO @ Fri, 10 Dec 2021 12:23:19: 10000000 INFO @ Fri, 10 Dec 2021 12:23:20: 16000000 INFO @ Fri, 10 Dec 2021 12:23:21: 27000000 INFO @ Fri, 10 Dec 2021 12:23:24: 11000000 INFO @ Fri, 10 Dec 2021 12:23:25: 17000000 INFO @ Fri, 10 Dec 2021 12:23:25: 28000000 INFO @ Fri, 10 Dec 2021 12:23:29: 12000000 INFO @ Fri, 10 Dec 2021 12:23:30: 29000000 INFO @ Fri, 10 Dec 2021 12:23:30: 18000000 INFO @ Fri, 10 Dec 2021 12:23:34: 30000000 INFO @ Fri, 10 Dec 2021 12:23:35: 13000000 INFO @ Fri, 10 Dec 2021 12:23:35: 19000000 INFO @ Fri, 10 Dec 2021 12:23:38: 31000000 INFO @ Fri, 10 Dec 2021 12:23:40: 20000000 INFO @ Fri, 10 Dec 2021 12:23:40: 14000000 INFO @ Fri, 10 Dec 2021 12:23:42: 32000000 INFO @ Fri, 10 Dec 2021 12:23:44: 21000000 INFO @ Fri, 10 Dec 2021 12:23:46: 15000000 INFO @ Fri, 10 Dec 2021 12:23:47: 33000000 INFO @ Fri, 10 Dec 2021 12:23:49: 22000000 INFO @ Fri, 10 Dec 2021 12:23:51: 34000000 INFO @ Fri, 10 Dec 2021 12:23:51: 16000000 INFO @ Fri, 10 Dec 2021 12:23:54: 23000000 INFO @ Fri, 10 Dec 2021 12:23:55: 35000000 INFO @ Fri, 10 Dec 2021 12:23:57: 17000000 INFO @ Fri, 10 Dec 2021 12:23:59: 24000000 INFO @ Fri, 10 Dec 2021 12:23:59: 36000000 INFO @ Fri, 10 Dec 2021 12:24:02: 18000000 INFO @ Fri, 10 Dec 2021 12:24:03: 25000000 INFO @ Fri, 10 Dec 2021 12:24:03: 37000000 INFO @ Fri, 10 Dec 2021 12:24:07: 19000000 INFO @ Fri, 10 Dec 2021 12:24:07: 38000000 INFO @ Fri, 10 Dec 2021 12:24:08: 26000000 INFO @ Fri, 10 Dec 2021 12:24:12: 39000000 INFO @ Fri, 10 Dec 2021 12:24:13: 20000000 INFO @ Fri, 10 Dec 2021 12:24:13: 27000000 INFO @ Fri, 10 Dec 2021 12:24:16: 40000000 INFO @ Fri, 10 Dec 2021 12:24:17: 28000000 INFO @ Fri, 10 Dec 2021 12:24:19: 21000000 INFO @ Fri, 10 Dec 2021 12:24:20: 41000000 INFO @ Fri, 10 Dec 2021 12:24:22: 29000000 INFO @ Fri, 10 Dec 2021 12:24:24: 22000000 INFO @ Fri, 10 Dec 2021 12:24:24: 42000000 INFO @ Fri, 10 Dec 2021 12:24:27: 30000000 INFO @ Fri, 10 Dec 2021 12:24:29: 43000000 INFO @ Fri, 10 Dec 2021 12:24:29: 23000000 INFO @ Fri, 10 Dec 2021 12:24:32: 31000000 INFO @ Fri, 10 Dec 2021 12:24:33: 44000000 INFO @ Fri, 10 Dec 2021 12:24:34: 24000000 INFO @ Fri, 10 Dec 2021 12:24:37: 32000000 INFO @ Fri, 10 Dec 2021 12:24:37: 45000000 INFO @ Fri, 10 Dec 2021 12:24:39: 25000000 INFO @ Fri, 10 Dec 2021 12:24:41: 33000000 INFO @ Fri, 10 Dec 2021 12:24:41: 46000000 INFO @ Fri, 10 Dec 2021 12:24:44: 26000000 INFO @ Fri, 10 Dec 2021 12:24:46: 47000000 INFO @ Fri, 10 Dec 2021 12:24:46: 34000000 INFO @ Fri, 10 Dec 2021 12:24:49: 27000000 INFO @ Fri, 10 Dec 2021 12:24:50: 48000000 INFO @ Fri, 10 Dec 2021 12:24:50: 35000000 INFO @ Fri, 10 Dec 2021 12:24:54: 28000000 INFO @ Fri, 10 Dec 2021 12:24:54: 49000000 INFO @ Fri, 10 Dec 2021 12:24:55: 36000000 INFO @ Fri, 10 Dec 2021 12:24:59: 50000000 INFO @ Fri, 10 Dec 2021 12:24:59: 29000000 INFO @ Fri, 10 Dec 2021 12:25:00: 37000000 INFO @ Fri, 10 Dec 2021 12:25:03: 51000000 INFO @ Fri, 10 Dec 2021 12:25:04: 30000000 INFO @ Fri, 10 Dec 2021 12:25:05: 38000000 INFO @ Fri, 10 Dec 2021 12:25:07: 52000000 INFO @ Fri, 10 Dec 2021 12:25:09: 31000000 INFO @ Fri, 10 Dec 2021 12:25:10: 39000000 INFO @ Fri, 10 Dec 2021 12:25:12: 53000000 INFO @ Fri, 10 Dec 2021 12:25:14: 32000000 INFO @ Fri, 10 Dec 2021 12:25:14: 40000000 INFO @ Fri, 10 Dec 2021 12:25:16: 54000000 INFO @ Fri, 10 Dec 2021 12:25:19: 33000000 INFO @ Fri, 10 Dec 2021 12:25:19: 41000000 INFO @ Fri, 10 Dec 2021 12:25:20: 55000000 INFO @ Fri, 10 Dec 2021 12:25:23: 34000000 INFO @ Fri, 10 Dec 2021 12:25:24: 42000000 INFO @ Fri, 10 Dec 2021 12:25:24: 56000000 INFO @ Fri, 10 Dec 2021 12:25:28: 35000000 INFO @ Fri, 10 Dec 2021 12:25:28: 57000000 INFO @ Fri, 10 Dec 2021 12:25:29: 43000000 INFO @ Fri, 10 Dec 2021 12:25:33: 58000000 INFO @ Fri, 10 Dec 2021 12:25:33: 44000000 INFO @ Fri, 10 Dec 2021 12:25:33: 36000000 INFO @ Fri, 10 Dec 2021 12:25:37: 59000000 INFO @ Fri, 10 Dec 2021 12:25:38: 45000000 INFO @ Fri, 10 Dec 2021 12:25:38: 37000000 INFO @ Fri, 10 Dec 2021 12:25:41: 60000000 INFO @ Fri, 10 Dec 2021 12:25:43: 46000000 INFO @ Fri, 10 Dec 2021 12:25:43: 38000000 INFO @ Fri, 10 Dec 2021 12:25:45: 61000000 INFO @ Fri, 10 Dec 2021 12:25:48: 47000000 INFO @ Fri, 10 Dec 2021 12:25:48: 39000000 INFO @ Fri, 10 Dec 2021 12:25:49: 62000000 INFO @ Fri, 10 Dec 2021 12:25:53: 48000000 INFO @ Fri, 10 Dec 2021 12:25:54: 40000000 INFO @ Fri, 10 Dec 2021 12:25:54: 63000000 INFO @ Fri, 10 Dec 2021 12:25:57: 49000000 INFO @ Fri, 10 Dec 2021 12:25:58: 64000000 INFO @ Fri, 10 Dec 2021 12:25:58: 41000000 INFO @ Fri, 10 Dec 2021 12:26:01: 65000000 INFO @ Fri, 10 Dec 2021 12:26:02: 50000000 INFO @ Fri, 10 Dec 2021 12:26:03: 42000000 INFO @ Fri, 10 Dec 2021 12:26:06: 66000000 INFO @ Fri, 10 Dec 2021 12:26:07: 51000000 INFO @ Fri, 10 Dec 2021 12:26:08: 43000000 INFO @ Fri, 10 Dec 2021 12:26:10: 67000000 INFO @ Fri, 10 Dec 2021 12:26:12: 52000000 INFO @ Fri, 10 Dec 2021 12:26:13: 44000000 INFO @ Fri, 10 Dec 2021 12:26:14: 68000000 INFO @ Fri, 10 Dec 2021 12:26:17: 53000000 INFO @ Fri, 10 Dec 2021 12:26:18: 69000000 INFO @ Fri, 10 Dec 2021 12:26:18: 45000000 INFO @ Fri, 10 Dec 2021 12:26:22: 54000000 INFO @ Fri, 10 Dec 2021 12:26:23: 70000000 INFO @ Fri, 10 Dec 2021 12:26:24: 46000000 INFO @ Fri, 10 Dec 2021 12:26:26: 55000000 INFO @ Fri, 10 Dec 2021 12:26:27: 71000000 INFO @ Fri, 10 Dec 2021 12:26:29: 47000000 INFO @ Fri, 10 Dec 2021 12:26:31: 56000000 INFO @ Fri, 10 Dec 2021 12:26:31: 72000000 INFO @ Fri, 10 Dec 2021 12:26:34: 48000000 INFO @ Fri, 10 Dec 2021 12:26:35: 73000000 INFO @ Fri, 10 Dec 2021 12:26:36: 57000000 INFO @ Fri, 10 Dec 2021 12:26:39: 49000000 INFO @ Fri, 10 Dec 2021 12:26:39: 74000000 INFO @ Fri, 10 Dec 2021 12:26:40: 58000000 INFO @ Fri, 10 Dec 2021 12:26:44: 75000000 INFO @ Fri, 10 Dec 2021 12:26:44: 50000000 INFO @ Fri, 10 Dec 2021 12:26:45: 59000000 INFO @ Fri, 10 Dec 2021 12:26:48: 76000000 INFO @ Fri, 10 Dec 2021 12:26:49: 51000000 INFO @ Fri, 10 Dec 2021 12:26:50: 60000000 INFO @ Fri, 10 Dec 2021 12:26:52: 77000000 INFO @ Fri, 10 Dec 2021 12:26:54: 52000000 INFO @ Fri, 10 Dec 2021 12:26:55: 61000000 INFO @ Fri, 10 Dec 2021 12:26:56: 78000000 INFO @ Fri, 10 Dec 2021 12:26:59: 62000000 INFO @ Fri, 10 Dec 2021 12:26:59: 53000000 INFO @ Fri, 10 Dec 2021 12:27:01: 79000000 INFO @ Fri, 10 Dec 2021 12:27:04: 63000000 INFO @ Fri, 10 Dec 2021 12:27:04: 54000000 INFO @ Fri, 10 Dec 2021 12:27:05: 80000000 INFO @ Fri, 10 Dec 2021 12:27:08: 64000000 INFO @ Fri, 10 Dec 2021 12:27:09: 81000000 INFO @ Fri, 10 Dec 2021 12:27:09: 55000000 INFO @ Fri, 10 Dec 2021 12:27:12: 65000000 INFO @ Fri, 10 Dec 2021 12:27:13: 82000000 INFO @ Fri, 10 Dec 2021 12:27:14: 56000000 INFO @ Fri, 10 Dec 2021 12:27:17: 66000000 INFO @ Fri, 10 Dec 2021 12:27:17: 83000000 INFO @ Fri, 10 Dec 2021 12:27:19: 57000000 INFO @ Fri, 10 Dec 2021 12:27:22: 84000000 INFO @ Fri, 10 Dec 2021 12:27:22: 67000000 INFO @ Fri, 10 Dec 2021 12:27:24: 58000000 INFO @ Fri, 10 Dec 2021 12:27:26: 85000000 INFO @ Fri, 10 Dec 2021 12:27:27: 68000000 INFO @ Fri, 10 Dec 2021 12:27:29: 59000000 INFO @ Fri, 10 Dec 2021 12:27:30: 86000000 INFO @ Fri, 10 Dec 2021 12:27:31: 69000000 INFO @ Fri, 10 Dec 2021 12:27:34: 60000000 INFO @ Fri, 10 Dec 2021 12:27:35: 87000000 INFO @ Fri, 10 Dec 2021 12:27:36: 70000000 INFO @ Fri, 10 Dec 2021 12:27:39: 61000000 INFO @ Fri, 10 Dec 2021 12:27:39: 88000000 INFO @ Fri, 10 Dec 2021 12:27:41: 71000000 INFO @ Fri, 10 Dec 2021 12:27:43: 89000000 INFO @ Fri, 10 Dec 2021 12:27:44: 62000000 INFO @ Fri, 10 Dec 2021 12:27:46: 72000000 INFO @ Fri, 10 Dec 2021 12:27:48: 90000000 INFO @ Fri, 10 Dec 2021 12:27:49: 63000000 INFO @ Fri, 10 Dec 2021 12:27:50: 73000000 INFO @ Fri, 10 Dec 2021 12:27:52: 91000000 INFO @ Fri, 10 Dec 2021 12:27:53: 64000000 INFO @ Fri, 10 Dec 2021 12:27:55: 74000000 INFO @ Fri, 10 Dec 2021 12:27:56: 92000000 INFO @ Fri, 10 Dec 2021 12:27:58: 65000000 INFO @ Fri, 10 Dec 2021 12:28:00: 75000000 INFO @ Fri, 10 Dec 2021 12:28:01: 93000000 INFO @ Fri, 10 Dec 2021 12:28:03: 66000000 INFO @ Fri, 10 Dec 2021 12:28:05: 76000000 INFO @ Fri, 10 Dec 2021 12:28:05: 94000000 INFO @ Fri, 10 Dec 2021 12:28:08: 67000000 INFO @ Fri, 10 Dec 2021 12:28:09: 95000000 INFO @ Fri, 10 Dec 2021 12:28:09: 77000000 INFO @ Fri, 10 Dec 2021 12:28:13: 68000000 INFO @ Fri, 10 Dec 2021 12:28:13: 96000000 INFO @ Fri, 10 Dec 2021 12:28:14: 78000000 INFO @ Fri, 10 Dec 2021 12:28:17: 97000000 INFO @ Fri, 10 Dec 2021 12:28:18: 69000000 INFO @ Fri, 10 Dec 2021 12:28:19: 79000000 INFO @ Fri, 10 Dec 2021 12:28:22: 98000000 INFO @ Fri, 10 Dec 2021 12:28:23: 70000000 INFO @ Fri, 10 Dec 2021 12:28:23: 80000000 INFO @ Fri, 10 Dec 2021 12:28:26: 99000000 INFO @ Fri, 10 Dec 2021 12:28:28: 71000000 INFO @ Fri, 10 Dec 2021 12:28:28: 81000000 INFO @ Fri, 10 Dec 2021 12:28:30: 100000000 INFO @ Fri, 10 Dec 2021 12:28:33: 72000000 INFO @ Fri, 10 Dec 2021 12:28:33: 82000000 INFO @ Fri, 10 Dec 2021 12:28:34: 101000000 INFO @ Fri, 10 Dec 2021 12:28:37: 73000000 INFO @ Fri, 10 Dec 2021 12:28:38: 83000000 INFO @ Fri, 10 Dec 2021 12:28:39: 102000000 INFO @ Fri, 10 Dec 2021 12:28:42: 74000000 INFO @ Fri, 10 Dec 2021 12:28:42: 84000000 INFO @ Fri, 10 Dec 2021 12:28:43: 103000000 INFO @ Fri, 10 Dec 2021 12:28:47: 104000000 INFO @ Fri, 10 Dec 2021 12:28:47: 85000000 INFO @ Fri, 10 Dec 2021 12:28:47: 75000000 INFO @ Fri, 10 Dec 2021 12:28:51: 105000000 INFO @ Fri, 10 Dec 2021 12:28:52: 86000000 INFO @ Fri, 10 Dec 2021 12:28:52: 76000000 INFO @ Fri, 10 Dec 2021 12:28:55: 106000000 INFO @ Fri, 10 Dec 2021 12:28:57: 77000000 INFO @ Fri, 10 Dec 2021 12:28:57: 87000000 INFO @ Fri, 10 Dec 2021 12:28:59: 107000000 INFO @ Fri, 10 Dec 2021 12:29:02: 78000000 INFO @ Fri, 10 Dec 2021 12:29:02: 88000000 INFO @ Fri, 10 Dec 2021 12:29:04: 108000000 INFO @ Fri, 10 Dec 2021 12:29:07: 79000000 INFO @ Fri, 10 Dec 2021 12:29:07: 89000000 INFO @ Fri, 10 Dec 2021 12:29:08: 109000000 INFO @ Fri, 10 Dec 2021 12:29:12: 80000000 INFO @ Fri, 10 Dec 2021 12:29:12: 110000000 INFO @ Fri, 10 Dec 2021 12:29:12: 90000000 INFO @ Fri, 10 Dec 2021 12:29:16: 111000000 INFO @ Fri, 10 Dec 2021 12:29:17: 81000000 INFO @ Fri, 10 Dec 2021 12:29:17: 91000000 INFO @ Fri, 10 Dec 2021 12:29:20: 112000000 INFO @ Fri, 10 Dec 2021 12:29:22: 82000000 INFO @ Fri, 10 Dec 2021 12:29:22: 92000000 INFO @ Fri, 10 Dec 2021 12:29:24: 113000000 INFO @ Fri, 10 Dec 2021 12:29:27: 83000000 INFO @ Fri, 10 Dec 2021 12:29:27: 93000000 INFO @ Fri, 10 Dec 2021 12:29:29: 114000000 INFO @ Fri, 10 Dec 2021 12:29:32: 84000000 INFO @ Fri, 10 Dec 2021 12:29:32: 94000000 INFO @ Fri, 10 Dec 2021 12:29:33: 115000000 INFO @ Fri, 10 Dec 2021 12:29:37: 85000000 INFO @ Fri, 10 Dec 2021 12:29:37: 95000000 INFO @ Fri, 10 Dec 2021 12:29:37: 116000000 INFO @ Fri, 10 Dec 2021 12:29:42: 117000000 INFO @ Fri, 10 Dec 2021 12:29:42: 96000000 INFO @ Fri, 10 Dec 2021 12:29:42: 86000000 INFO @ Fri, 10 Dec 2021 12:29:46: 118000000 INFO @ Fri, 10 Dec 2021 12:29:47: 97000000 INFO @ Fri, 10 Dec 2021 12:29:47: 87000000 INFO @ Fri, 10 Dec 2021 12:29:50: 119000000 INFO @ Fri, 10 Dec 2021 12:29:52: 98000000 INFO @ Fri, 10 Dec 2021 12:29:52: 88000000 INFO @ Fri, 10 Dec 2021 12:29:54: 120000000 INFO @ Fri, 10 Dec 2021 12:29:57: 99000000 INFO @ Fri, 10 Dec 2021 12:29:57: 89000000 INFO @ Fri, 10 Dec 2021 12:29:58: 121000000 INFO @ Fri, 10 Dec 2021 12:30:02: 100000000 INFO @ Fri, 10 Dec 2021 12:30:02: 90000000 INFO @ Fri, 10 Dec 2021 12:30:03: 122000000 INFO @ Fri, 10 Dec 2021 12:30:07: 101000000 INFO @ Fri, 10 Dec 2021 12:30:07: 123000000 INFO @ Fri, 10 Dec 2021 12:30:07: 91000000 INFO @ Fri, 10 Dec 2021 12:30:11: 124000000 INFO @ Fri, 10 Dec 2021 12:30:12: 102000000 INFO @ Fri, 10 Dec 2021 12:30:12: 92000000 INFO @ Fri, 10 Dec 2021 12:30:15: 125000000 INFO @ Fri, 10 Dec 2021 12:30:17: 103000000 INFO @ Fri, 10 Dec 2021 12:30:17: 93000000 INFO @ Fri, 10 Dec 2021 12:30:19: 126000000 INFO @ Fri, 10 Dec 2021 12:30:22: 104000000 INFO @ Fri, 10 Dec 2021 12:30:22: 94000000 INFO @ Fri, 10 Dec 2021 12:30:24: 127000000 INFO @ Fri, 10 Dec 2021 12:30:26: 105000000 INFO @ Fri, 10 Dec 2021 12:30:27: 95000000 INFO @ Fri, 10 Dec 2021 12:30:28: 128000000 INFO @ Fri, 10 Dec 2021 12:30:31: 106000000 INFO @ Fri, 10 Dec 2021 12:30:32: 96000000 INFO @ Fri, 10 Dec 2021 12:30:32: 129000000 INFO @ Fri, 10 Dec 2021 12:30:36: 107000000 INFO @ Fri, 10 Dec 2021 12:30:37: 130000000 INFO @ Fri, 10 Dec 2021 12:30:37: 97000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 12:30:40: 108000000 INFO @ Fri, 10 Dec 2021 12:30:41: 131000000 INFO @ Fri, 10 Dec 2021 12:30:43: 98000000 INFO @ Fri, 10 Dec 2021 12:30:45: 109000000 INFO @ Fri, 10 Dec 2021 12:30:45: 132000000 INFO @ Fri, 10 Dec 2021 12:30:48: 99000000 INFO @ Fri, 10 Dec 2021 12:30:50: 133000000 INFO @ Fri, 10 Dec 2021 12:30:50: 110000000 INFO @ Fri, 10 Dec 2021 12:30:53: 100000000 INFO @ Fri, 10 Dec 2021 12:30:54: 134000000 INFO @ Fri, 10 Dec 2021 12:30:54: 111000000 INFO @ Fri, 10 Dec 2021 12:30:58: 135000000 INFO @ Fri, 10 Dec 2021 12:30:59: 101000000 INFO @ Fri, 10 Dec 2021 12:30:59: 112000000 INFO @ Fri, 10 Dec 2021 12:31:02: 136000000 INFO @ Fri, 10 Dec 2021 12:31:04: 113000000 INFO @ Fri, 10 Dec 2021 12:31:04: 102000000 INFO @ Fri, 10 Dec 2021 12:31:06: 137000000 INFO @ Fri, 10 Dec 2021 12:31:08: 114000000 INFO @ Fri, 10 Dec 2021 12:31:09: 103000000 INFO @ Fri, 10 Dec 2021 12:31:11: 138000000 INFO @ Fri, 10 Dec 2021 12:31:14: 115000000 INFO @ Fri, 10 Dec 2021 12:31:15: 104000000 INFO @ Fri, 10 Dec 2021 12:31:15: 139000000 INFO @ Fri, 10 Dec 2021 12:31:19: 116000000 INFO @ Fri, 10 Dec 2021 12:31:19: 140000000 INFO @ Fri, 10 Dec 2021 12:31:20: 105000000 INFO @ Fri, 10 Dec 2021 12:31:23: 141000000 INFO @ Fri, 10 Dec 2021 12:31:24: 117000000 INFO @ Fri, 10 Dec 2021 12:31:25: 106000000 INFO @ Fri, 10 Dec 2021 12:31:28: 142000000 INFO @ Fri, 10 Dec 2021 12:31:29: 118000000 INFO @ Fri, 10 Dec 2021 12:31:30: 107000000 INFO @ Fri, 10 Dec 2021 12:31:32: 143000000 INFO @ Fri, 10 Dec 2021 12:31:34: 119000000 INFO @ Fri, 10 Dec 2021 12:31:35: 108000000 INFO @ Fri, 10 Dec 2021 12:31:36: 144000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 12:31:39: 120000000 INFO @ Fri, 10 Dec 2021 12:31:40: 109000000 INFO @ Fri, 10 Dec 2021 12:31:40: 145000000 INFO @ Fri, 10 Dec 2021 12:31:44: 121000000 INFO @ Fri, 10 Dec 2021 12:31:45: 146000000 INFO @ Fri, 10 Dec 2021 12:31:45: 110000000 INFO @ Fri, 10 Dec 2021 12:31:49: 122000000 INFO @ Fri, 10 Dec 2021 12:31:49: 147000000 INFO @ Fri, 10 Dec 2021 12:31:50: 111000000 INFO @ Fri, 10 Dec 2021 12:31:53: 148000000 INFO @ Fri, 10 Dec 2021 12:31:54: 123000000 INFO @ Fri, 10 Dec 2021 12:31:55: 112000000 INFO @ Fri, 10 Dec 2021 12:31:57: 149000000 INFO @ Fri, 10 Dec 2021 12:31:58: 124000000 INFO @ Fri, 10 Dec 2021 12:32:00: 113000000 INFO @ Fri, 10 Dec 2021 12:32:02: 150000000 INFO @ Fri, 10 Dec 2021 12:32:03: 125000000 INFO @ Fri, 10 Dec 2021 12:32:04: 114000000 INFO @ Fri, 10 Dec 2021 12:32:06: 151000000 INFO @ Fri, 10 Dec 2021 12:32:08: 126000000 INFO @ Fri, 10 Dec 2021 12:32:10: 115000000 INFO @ Fri, 10 Dec 2021 12:32:10: 152000000 INFO @ Fri, 10 Dec 2021 12:32:13: 127000000 INFO @ Fri, 10 Dec 2021 12:32:14: 153000000 INFO @ Fri, 10 Dec 2021 12:32:15: 116000000 INFO @ Fri, 10 Dec 2021 12:32:18: 128000000 INFO @ Fri, 10 Dec 2021 12:32:19: 154000000 INFO @ Fri, 10 Dec 2021 12:32:20: 117000000 INFO @ Fri, 10 Dec 2021 12:32:23: 155000000 INFO @ Fri, 10 Dec 2021 12:32:23: 129000000 INFO @ Fri, 10 Dec 2021 12:32:25: 118000000 INFO @ Fri, 10 Dec 2021 12:32:27: 156000000 INFO @ Fri, 10 Dec 2021 12:32:28: 130000000 INFO @ Fri, 10 Dec 2021 12:32:30: 119000000 INFO @ Fri, 10 Dec 2021 12:32:32: 157000000 INFO @ Fri, 10 Dec 2021 12:32:33: 131000000 INFO @ Fri, 10 Dec 2021 12:32:35: 120000000 INFO @ Fri, 10 Dec 2021 12:32:36: 158000000 INFO @ Fri, 10 Dec 2021 12:32:38: 132000000 INFO @ Fri, 10 Dec 2021 12:32:40: 121000000 INFO @ Fri, 10 Dec 2021 12:32:40: 159000000 INFO @ Fri, 10 Dec 2021 12:32:43: 133000000 INFO @ Fri, 10 Dec 2021 12:32:44: 160000000 INFO @ Fri, 10 Dec 2021 12:32:45: 122000000 INFO @ Fri, 10 Dec 2021 12:32:48: 134000000 INFO @ Fri, 10 Dec 2021 12:32:49: 161000000 INFO @ Fri, 10 Dec 2021 12:32:50: 123000000 INFO @ Fri, 10 Dec 2021 12:32:53: 135000000 INFO @ Fri, 10 Dec 2021 12:32:53: 162000000 INFO @ Fri, 10 Dec 2021 12:32:55: 124000000 INFO @ Fri, 10 Dec 2021 12:32:58: 136000000 INFO @ Fri, 10 Dec 2021 12:32:58: 163000000 INFO @ Fri, 10 Dec 2021 12:33:00: 125000000 INFO @ Fri, 10 Dec 2021 12:33:03: 137000000 INFO @ Fri, 10 Dec 2021 12:33:03: 164000000 INFO @ Fri, 10 Dec 2021 12:33:05: 126000000 INFO @ Fri, 10 Dec 2021 12:33:08: 138000000 INFO @ Fri, 10 Dec 2021 12:33:08: 165000000 INFO @ Fri, 10 Dec 2021 12:33:10: 127000000 INFO @ Fri, 10 Dec 2021 12:33:13: 166000000 INFO @ Fri, 10 Dec 2021 12:33:13: 139000000 INFO @ Fri, 10 Dec 2021 12:33:15: 128000000 INFO @ Fri, 10 Dec 2021 12:33:18: 167000000 INFO @ Fri, 10 Dec 2021 12:33:18: 140000000 INFO @ Fri, 10 Dec 2021 12:33:20: 129000000 INFO @ Fri, 10 Dec 2021 12:33:22: 168000000 INFO @ Fri, 10 Dec 2021 12:33:23: 141000000 INFO @ Fri, 10 Dec 2021 12:33:25: 130000000 INFO @ Fri, 10 Dec 2021 12:33:26: 169000000 INFO @ Fri, 10 Dec 2021 12:33:28: 142000000 INFO @ Fri, 10 Dec 2021 12:33:30: 131000000 INFO @ Fri, 10 Dec 2021 12:33:31: 170000000 INFO @ Fri, 10 Dec 2021 12:33:33: 143000000 INFO @ Fri, 10 Dec 2021 12:33:35: 171000000 INFO @ Fri, 10 Dec 2021 12:33:35: 132000000 INFO @ Fri, 10 Dec 2021 12:33:38: 144000000 INFO @ Fri, 10 Dec 2021 12:33:39: 172000000 INFO @ Fri, 10 Dec 2021 12:33:40: 133000000 INFO @ Fri, 10 Dec 2021 12:33:43: 145000000 INFO @ Fri, 10 Dec 2021 12:33:43: 173000000 INFO @ Fri, 10 Dec 2021 12:33:45: 134000000 INFO @ Fri, 10 Dec 2021 12:33:47: 174000000 INFO @ Fri, 10 Dec 2021 12:33:48: 146000000 INFO @ Fri, 10 Dec 2021 12:33:50: 135000000 INFO @ Fri, 10 Dec 2021 12:33:51: 175000000 INFO @ Fri, 10 Dec 2021 12:33:53: 147000000 INFO @ Fri, 10 Dec 2021 12:33:55: 136000000 INFO @ Fri, 10 Dec 2021 12:33:55: 176000000 INFO @ Fri, 10 Dec 2021 12:33:58: 148000000 INFO @ Fri, 10 Dec 2021 12:34:00: 177000000 INFO @ Fri, 10 Dec 2021 12:34:00: 137000000 INFO @ Fri, 10 Dec 2021 12:34:03: 149000000 INFO @ Fri, 10 Dec 2021 12:34:04: 178000000 INFO @ Fri, 10 Dec 2021 12:34:05: 138000000 INFO @ Fri, 10 Dec 2021 12:34:08: 150000000 INFO @ Fri, 10 Dec 2021 12:34:08: 179000000 INFO @ Fri, 10 Dec 2021 12:34:10: 139000000 INFO @ Fri, 10 Dec 2021 12:34:12: 151000000 INFO @ Fri, 10 Dec 2021 12:34:12: 180000000 INFO @ Fri, 10 Dec 2021 12:34:15: 140000000 INFO @ Fri, 10 Dec 2021 12:34:16: 181000000 INFO @ Fri, 10 Dec 2021 12:34:17: 152000000 INFO @ Fri, 10 Dec 2021 12:34:20: 141000000 INFO @ Fri, 10 Dec 2021 12:34:20: 182000000 INFO @ Fri, 10 Dec 2021 12:34:22: 153000000 INFO @ Fri, 10 Dec 2021 12:34:25: 183000000 INFO @ Fri, 10 Dec 2021 12:34:25: 142000000 INFO @ Fri, 10 Dec 2021 12:34:27: 154000000 INFO @ Fri, 10 Dec 2021 12:34:29: 184000000 INFO @ Fri, 10 Dec 2021 12:34:30: 143000000 INFO @ Fri, 10 Dec 2021 12:34:31: 155000000 INFO @ Fri, 10 Dec 2021 12:34:33: 185000000 INFO @ Fri, 10 Dec 2021 12:34:35: 144000000 INFO @ Fri, 10 Dec 2021 12:34:37: 156000000 INFO @ Fri, 10 Dec 2021 12:34:37: 186000000 INFO @ Fri, 10 Dec 2021 12:34:40: 145000000 INFO @ Fri, 10 Dec 2021 12:34:42: 187000000 INFO @ Fri, 10 Dec 2021 12:34:42: 157000000 INFO @ Fri, 10 Dec 2021 12:34:45: 146000000 INFO @ Fri, 10 Dec 2021 12:34:46: 188000000 INFO @ Fri, 10 Dec 2021 12:34:47: 158000000 INFO @ Fri, 10 Dec 2021 12:34:50: 189000000 INFO @ Fri, 10 Dec 2021 12:34:50: 147000000 INFO @ Fri, 10 Dec 2021 12:34:52: 159000000 INFO @ Fri, 10 Dec 2021 12:34:54: 190000000 INFO @ Fri, 10 Dec 2021 12:34:55: 148000000 INFO @ Fri, 10 Dec 2021 12:34:56: 160000000 INFO @ Fri, 10 Dec 2021 12:34:58: 191000000 INFO @ Fri, 10 Dec 2021 12:35:00: 149000000 INFO @ Fri, 10 Dec 2021 12:35:01: 161000000 INFO @ Fri, 10 Dec 2021 12:35:02: 192000000 INFO @ Fri, 10 Dec 2021 12:35:05: 150000000 INFO @ Fri, 10 Dec 2021 12:35:06: 162000000 INFO @ Fri, 10 Dec 2021 12:35:06: 193000000 INFO @ Fri, 10 Dec 2021 12:35:09: 151000000 INFO @ Fri, 10 Dec 2021 12:35:11: 194000000 INFO @ Fri, 10 Dec 2021 12:35:12: 163000000 INFO @ Fri, 10 Dec 2021 12:35:14: 152000000 INFO @ Fri, 10 Dec 2021 12:35:15: 195000000 INFO @ Fri, 10 Dec 2021 12:35:17: 164000000 INFO @ Fri, 10 Dec 2021 12:35:19: 196000000 INFO @ Fri, 10 Dec 2021 12:35:20: 153000000 INFO @ Fri, 10 Dec 2021 12:35:23: 197000000 INFO @ Fri, 10 Dec 2021 12:35:23: 165000000 INFO @ Fri, 10 Dec 2021 12:35:24: 154000000 INFO @ Fri, 10 Dec 2021 12:35:25: #1 tag size is determined as 48 bps INFO @ Fri, 10 Dec 2021 12:35:25: #1 tag size = 48 INFO @ Fri, 10 Dec 2021 12:35:25: #1 total tags in treatment: 11341 INFO @ Fri, 10 Dec 2021 12:35:25: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 12:35:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 12:35:25: #1 tags after filtering in treatment: 10027 INFO @ Fri, 10 Dec 2021 12:35:25: #1 Redundant rate of treatment: 0.12 INFO @ Fri, 10 Dec 2021 12:35:25: #1 finished! INFO @ Fri, 10 Dec 2021 12:35:25: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 12:35:25: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 12:35:25: #2 number of paired peaks: 102 WARNING @ Fri, 10 Dec 2021 12:35:25: Fewer paired peaks (102) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 102 pairs to build model! INFO @ Fri, 10 Dec 2021 12:35:25: start model_add_line... INFO @ Fri, 10 Dec 2021 12:35:25: start X-correlation... INFO @ Fri, 10 Dec 2021 12:35:25: end of X-cor INFO @ Fri, 10 Dec 2021 12:35:25: #2 finished! INFO @ Fri, 10 Dec 2021 12:35:25: #2 predicted fragment length is 271 bps INFO @ Fri, 10 Dec 2021 12:35:25: #2 alternative fragment length(s) may be 30,93,120,146,182,208,240,271,300,320,379,415,438,473 bps INFO @ Fri, 10 Dec 2021 12:35:25: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.05_model.r INFO @ Fri, 10 Dec 2021 12:35:25: #3 Call peaks... INFO @ Fri, 10 Dec 2021 12:35:25: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 12:35:25: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 12:35:25: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.05_peaks.xls INFO @ Fri, 10 Dec 2021 12:35:25: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 12:35:25: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.05_summits.bed INFO @ Fri, 10 Dec 2021 12:35:25: Done! pass1 - making usageList (2 chroms): 0 millis pass2 - checking and writing primary data (11 records, 4 fields): 26 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 12:35:29: 166000000 INFO @ Fri, 10 Dec 2021 12:35:29: 155000000 INFO @ Fri, 10 Dec 2021 12:35:34: 167000000 INFO @ Fri, 10 Dec 2021 12:35:34: 156000000 INFO @ Fri, 10 Dec 2021 12:35:39: 168000000 INFO @ Fri, 10 Dec 2021 12:35:39: 157000000 INFO @ Fri, 10 Dec 2021 12:35:43: 169000000 INFO @ Fri, 10 Dec 2021 12:35:44: 158000000 INFO @ Fri, 10 Dec 2021 12:35:48: 170000000 INFO @ Fri, 10 Dec 2021 12:35:49: 159000000 INFO @ Fri, 10 Dec 2021 12:35:53: 171000000 INFO @ Fri, 10 Dec 2021 12:35:54: 160000000 INFO @ Fri, 10 Dec 2021 12:35:58: 172000000 INFO @ Fri, 10 Dec 2021 12:35:58: 161000000 INFO @ Fri, 10 Dec 2021 12:36:02: 173000000 INFO @ Fri, 10 Dec 2021 12:36:04: 162000000 INFO @ Fri, 10 Dec 2021 12:36:07: 174000000 INFO @ Fri, 10 Dec 2021 12:36:09: 163000000 INFO @ Fri, 10 Dec 2021 12:36:12: 175000000 INFO @ Fri, 10 Dec 2021 12:36:15: 164000000 INFO @ Fri, 10 Dec 2021 12:36:16: 176000000 INFO @ Fri, 10 Dec 2021 12:36:20: 165000000 INFO @ Fri, 10 Dec 2021 12:36:21: 177000000 INFO @ Fri, 10 Dec 2021 12:36:25: 178000000 INFO @ Fri, 10 Dec 2021 12:36:26: 166000000 INFO @ Fri, 10 Dec 2021 12:36:30: 179000000 INFO @ Fri, 10 Dec 2021 12:36:31: 167000000 INFO @ Fri, 10 Dec 2021 12:36:35: 180000000 INFO @ Fri, 10 Dec 2021 12:36:36: 168000000 INFO @ Fri, 10 Dec 2021 12:36:39: 181000000 INFO @ Fri, 10 Dec 2021 12:36:41: 169000000 INFO @ Fri, 10 Dec 2021 12:36:44: 182000000 INFO @ Fri, 10 Dec 2021 12:36:46: 170000000 INFO @ Fri, 10 Dec 2021 12:36:49: 183000000 INFO @ Fri, 10 Dec 2021 12:36:50: 171000000 INFO @ Fri, 10 Dec 2021 12:36:53: 184000000 INFO @ Fri, 10 Dec 2021 12:36:55: 172000000 INFO @ Fri, 10 Dec 2021 12:36:58: 185000000 INFO @ Fri, 10 Dec 2021 12:37:00: 173000000 INFO @ Fri, 10 Dec 2021 12:37:03: 186000000 INFO @ Fri, 10 Dec 2021 12:37:04: 174000000 INFO @ Fri, 10 Dec 2021 12:37:08: 187000000 INFO @ Fri, 10 Dec 2021 12:37:09: 175000000 INFO @ Fri, 10 Dec 2021 12:37:12: 188000000 INFO @ Fri, 10 Dec 2021 12:37:13: 176000000 INFO @ Fri, 10 Dec 2021 12:37:17: 189000000 INFO @ Fri, 10 Dec 2021 12:37:18: 177000000 INFO @ Fri, 10 Dec 2021 12:37:22: 190000000 INFO @ Fri, 10 Dec 2021 12:37:23: 178000000 INFO @ Fri, 10 Dec 2021 12:37:26: 191000000 INFO @ Fri, 10 Dec 2021 12:37:28: 179000000 INFO @ Fri, 10 Dec 2021 12:37:31: 192000000 INFO @ Fri, 10 Dec 2021 12:37:32: 180000000 INFO @ Fri, 10 Dec 2021 12:37:36: 193000000 INFO @ Fri, 10 Dec 2021 12:37:37: 181000000 INFO @ Fri, 10 Dec 2021 12:37:40: 194000000 INFO @ Fri, 10 Dec 2021 12:37:42: 182000000 INFO @ Fri, 10 Dec 2021 12:37:45: 195000000 INFO @ Fri, 10 Dec 2021 12:37:46: 183000000 INFO @ Fri, 10 Dec 2021 12:37:50: 196000000 INFO @ Fri, 10 Dec 2021 12:37:51: 184000000 INFO @ Fri, 10 Dec 2021 12:37:54: 197000000 INFO @ Fri, 10 Dec 2021 12:37:56: 185000000 INFO @ Fri, 10 Dec 2021 12:37:56: #1 tag size is determined as 48 bps INFO @ Fri, 10 Dec 2021 12:37:56: #1 tag size = 48 INFO @ Fri, 10 Dec 2021 12:37:56: #1 total tags in treatment: 11341 INFO @ Fri, 10 Dec 2021 12:37:56: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 12:37:56: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 12:37:56: #1 tags after filtering in treatment: 10027 INFO @ Fri, 10 Dec 2021 12:37:56: #1 Redundant rate of treatment: 0.12 INFO @ Fri, 10 Dec 2021 12:37:56: #1 finished! INFO @ Fri, 10 Dec 2021 12:37:56: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 12:37:56: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 12:37:56: #2 number of paired peaks: 102 WARNING @ Fri, 10 Dec 2021 12:37:56: Fewer paired peaks (102) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 102 pairs to build model! INFO @ Fri, 10 Dec 2021 12:37:56: start model_add_line... INFO @ Fri, 10 Dec 2021 12:37:56: start X-correlation... INFO @ Fri, 10 Dec 2021 12:37:56: end of X-cor INFO @ Fri, 10 Dec 2021 12:37:56: #2 finished! INFO @ Fri, 10 Dec 2021 12:37:56: #2 predicted fragment length is 271 bps INFO @ Fri, 10 Dec 2021 12:37:56: #2 alternative fragment length(s) may be 30,93,120,146,182,208,240,271,300,320,379,415,438,473 bps INFO @ Fri, 10 Dec 2021 12:37:56: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.10_model.r INFO @ Fri, 10 Dec 2021 12:37:56: #3 Call peaks... INFO @ Fri, 10 Dec 2021 12:37:56: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 12:37:56: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 12:37:56: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.10_peaks.xls INFO @ Fri, 10 Dec 2021 12:37:56: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 12:37:56: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.10_summits.bed INFO @ Fri, 10 Dec 2021 12:37:56: Done! pass1 - making usageList (2 chroms): 0 millis pass2 - checking and writing primary data (5 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 12:38:01: 186000000 INFO @ Fri, 10 Dec 2021 12:38:05: 187000000 INFO @ Fri, 10 Dec 2021 12:38:10: 188000000 INFO @ Fri, 10 Dec 2021 12:38:14: 189000000 INFO @ Fri, 10 Dec 2021 12:38:19: 190000000 INFO @ Fri, 10 Dec 2021 12:38:24: 191000000 INFO @ Fri, 10 Dec 2021 12:38:29: 192000000 INFO @ Fri, 10 Dec 2021 12:38:33: 193000000 INFO @ Fri, 10 Dec 2021 12:38:38: 194000000 INFO @ Fri, 10 Dec 2021 12:38:42: 195000000 INFO @ Fri, 10 Dec 2021 12:38:47: 196000000 INFO @ Fri, 10 Dec 2021 12:38:51: 197000000 INFO @ Fri, 10 Dec 2021 12:38:54: #1 tag size is determined as 48 bps INFO @ Fri, 10 Dec 2021 12:38:54: #1 tag size = 48 INFO @ Fri, 10 Dec 2021 12:38:54: #1 total tags in treatment: 11341 INFO @ Fri, 10 Dec 2021 12:38:54: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 12:38:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 12:38:54: #1 tags after filtering in treatment: 10027 INFO @ Fri, 10 Dec 2021 12:38:54: #1 Redundant rate of treatment: 0.12 INFO @ Fri, 10 Dec 2021 12:38:54: #1 finished! INFO @ Fri, 10 Dec 2021 12:38:54: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 12:38:54: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 12:38:54: #2 number of paired peaks: 102 WARNING @ Fri, 10 Dec 2021 12:38:54: Fewer paired peaks (102) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 102 pairs to build model! INFO @ Fri, 10 Dec 2021 12:38:54: start model_add_line... INFO @ Fri, 10 Dec 2021 12:38:54: start X-correlation... INFO @ Fri, 10 Dec 2021 12:38:54: end of X-cor INFO @ Fri, 10 Dec 2021 12:38:54: #2 finished! INFO @ Fri, 10 Dec 2021 12:38:54: #2 predicted fragment length is 271 bps INFO @ Fri, 10 Dec 2021 12:38:54: #2 alternative fragment length(s) may be 30,93,120,146,182,208,240,271,300,320,379,415,438,473 bps INFO @ Fri, 10 Dec 2021 12:38:54: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.20_model.r INFO @ Fri, 10 Dec 2021 12:38:54: #3 Call peaks... INFO @ Fri, 10 Dec 2021 12:38:54: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 12:38:54: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 12:38:54: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.20_peaks.xls INFO @ Fri, 10 Dec 2021 12:38:54: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 12:38:54: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9717929/SRX9717929.20_summits.bed INFO @ Fri, 10 Dec 2021 12:38:54: Done! pass1 - making usageList (1 chroms): 1 millis pass2 - checking and writing primary data (2 records, 4 fields): 1 millis CompletedMACS2peakCalling