Job ID = 14166994 SRX = SRX9717928 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 6443463 spots for SRR13288660/SRR13288660.sra Written 6443463 spots for SRR13288660/SRR13288660.sra Read 4650500 spots for SRR13288661/SRR13288661.sra Written 4650500 spots for SRR13288661/SRR13288661.sra Read 4713363 spots for SRR13288662/SRR13288662.sra Written 4713363 spots for SRR13288662/SRR13288662.sra Read 4558043 spots for SRR13288663/SRR13288663.sra Written 4558043 spots for SRR13288663/SRR13288663.sra Read 5200478 spots for SRR13288664/SRR13288664.sra Written 5200478 spots for SRR13288664/SRR13288664.sra Read 5063231 spots for SRR13288665/SRR13288665.sra Written 5063231 spots for SRR13288665/SRR13288665.sra Read 5085554 spots for SRR13288666/SRR13288666.sra Written 5085554 spots for SRR13288666/SRR13288666.sra Read 4989305 spots for SRR13288667/SRR13288667.sra Written 4989305 spots for SRR13288667/SRR13288667.sra Read 6283978 spots for SRR13288668/SRR13288668.sra Written 6283978 spots for SRR13288668/SRR13288668.sra Read 6308277 spots for SRR13288669/SRR13288669.sra Written 6308277 spots for SRR13288669/SRR13288669.sra Read 6187031 spots for SRR13288670/SRR13288670.sra Written 6187031 spots for SRR13288670/SRR13288670.sra Read 6156760 spots for SRR13288671/SRR13288671.sra Written 6156760 spots for SRR13288671/SRR13288671.sra Read 6006450 spots for SRR13288672/SRR13288672.sra Written 6006450 spots for SRR13288672/SRR13288672.sra Read 6029801 spots for SRR13288673/SRR13288673.sra Written 6029801 spots for SRR13288673/SRR13288673.sra Read 5900346 spots for SRR13288674/SRR13288674.sra Written 5900346 spots for SRR13288674/SRR13288674.sra Read 4827745 spots for SRR13288675/SRR13288675.sra Written 4827745 spots for SRR13288675/SRR13288675.sra fastq に変換しました。 bowtie でマッピング中... Your job 14167614 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:47:36 88404325 reads; of these: 88404325 (100.00%) were paired; of these: 88390573 (99.98%) aligned concordantly 0 times 8862 (0.01%) aligned concordantly exactly 1 time 4890 (0.01%) aligned concordantly >1 times ---- 88390573 pairs aligned concordantly 0 times; of these: 13519824 (15.30%) aligned discordantly 1 time ---- 74870749 pairs aligned 0 times concordantly or discordantly; of these: 149741498 mates make up the pairs; of these: 46902647 (31.32%) aligned 0 times 49795232 (33.25%) aligned exactly 1 time 53043619 (35.42%) aligned >1 times 73.47% overall alignment rate Time searching: 01:47:36 Overall time: 01:47:36 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 52 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 855160 / 2601985 = 0.3287 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 11:05:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 11:05:44: #1 read tag files... INFO @ Fri, 10 Dec 2021 11:05:44: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 11:05:50: 1000000 INFO @ Fri, 10 Dec 2021 11:05:56: 2000000 INFO @ Fri, 10 Dec 2021 11:06:02: 3000000 INFO @ Fri, 10 Dec 2021 11:06:08: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 11:06:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 11:06:14: #1 read tag files... INFO @ Fri, 10 Dec 2021 11:06:14: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 11:06:14: 5000000 INFO @ Fri, 10 Dec 2021 11:06:20: 1000000 INFO @ Fri, 10 Dec 2021 11:06:21: 6000000 INFO @ Fri, 10 Dec 2021 11:06:26: 2000000 INFO @ Fri, 10 Dec 2021 11:06:28: 7000000 INFO @ Fri, 10 Dec 2021 11:06:32: 3000000 INFO @ Fri, 10 Dec 2021 11:06:35: 8000000 INFO @ Fri, 10 Dec 2021 11:06:38: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 11:06:42: 9000000 INFO @ Fri, 10 Dec 2021 11:06:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 11:06:44: #1 read tag files... INFO @ Fri, 10 Dec 2021 11:06:44: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 11:06:44: 5000000 INFO @ Fri, 10 Dec 2021 11:06:49: 10000000 INFO @ Fri, 10 Dec 2021 11:06:50: 1000000 INFO @ Fri, 10 Dec 2021 11:06:50: 6000000 INFO @ Fri, 10 Dec 2021 11:06:56: 2000000 INFO @ Fri, 10 Dec 2021 11:06:57: 11000000 INFO @ Fri, 10 Dec 2021 11:06:57: 7000000 INFO @ Fri, 10 Dec 2021 11:07:03: 3000000 INFO @ Fri, 10 Dec 2021 11:07:03: 8000000 INFO @ Fri, 10 Dec 2021 11:07:04: 12000000 INFO @ Fri, 10 Dec 2021 11:07:09: 4000000 INFO @ Fri, 10 Dec 2021 11:07:09: 9000000 INFO @ Fri, 10 Dec 2021 11:07:11: 13000000 INFO @ Fri, 10 Dec 2021 11:07:15: 5000000 INFO @ Fri, 10 Dec 2021 11:07:16: 10000000 INFO @ Fri, 10 Dec 2021 11:07:18: 14000000 INFO @ Fri, 10 Dec 2021 11:07:21: 6000000 INFO @ Fri, 10 Dec 2021 11:07:22: 11000000 INFO @ Fri, 10 Dec 2021 11:07:25: 15000000 INFO @ Fri, 10 Dec 2021 11:07:27: 7000000 INFO @ Fri, 10 Dec 2021 11:07:28: 12000000 INFO @ Fri, 10 Dec 2021 11:07:33: 16000000 INFO @ Fri, 10 Dec 2021 11:07:34: 8000000 INFO @ Fri, 10 Dec 2021 11:07:35: 13000000 INFO @ Fri, 10 Dec 2021 11:07:40: 9000000 INFO @ Fri, 10 Dec 2021 11:07:40: 17000000 INFO @ Fri, 10 Dec 2021 11:07:41: 14000000 INFO @ Fri, 10 Dec 2021 11:07:46: 10000000 INFO @ Fri, 10 Dec 2021 11:07:47: 18000000 INFO @ Fri, 10 Dec 2021 11:07:48: 15000000 INFO @ Fri, 10 Dec 2021 11:07:52: 11000000 INFO @ Fri, 10 Dec 2021 11:07:54: 19000000 INFO @ Fri, 10 Dec 2021 11:07:54: 16000000 INFO @ Fri, 10 Dec 2021 11:07:59: 12000000 INFO @ Fri, 10 Dec 2021 11:08:01: 17000000 INFO @ Fri, 10 Dec 2021 11:08:02: 20000000 INFO @ Fri, 10 Dec 2021 11:08:05: 13000000 INFO @ Fri, 10 Dec 2021 11:08:07: 18000000 INFO @ Fri, 10 Dec 2021 11:08:09: 21000000 INFO @ Fri, 10 Dec 2021 11:08:12: 14000000 INFO @ Fri, 10 Dec 2021 11:08:14: 19000000 INFO @ Fri, 10 Dec 2021 11:08:16: 22000000 INFO @ Fri, 10 Dec 2021 11:08:18: 15000000 INFO @ Fri, 10 Dec 2021 11:08:21: 20000000 INFO @ Fri, 10 Dec 2021 11:08:23: 23000000 INFO @ Fri, 10 Dec 2021 11:08:24: 16000000 INFO @ Fri, 10 Dec 2021 11:08:27: 21000000 INFO @ Fri, 10 Dec 2021 11:08:30: 24000000 INFO @ Fri, 10 Dec 2021 11:08:31: 17000000 INFO @ Fri, 10 Dec 2021 11:08:33: 22000000 INFO @ Fri, 10 Dec 2021 11:08:37: 18000000 INFO @ Fri, 10 Dec 2021 11:08:37: 25000000 INFO @ Fri, 10 Dec 2021 11:08:40: 23000000 INFO @ Fri, 10 Dec 2021 11:08:43: 19000000 INFO @ Fri, 10 Dec 2021 11:08:44: 26000000 INFO @ Fri, 10 Dec 2021 11:08:46: 24000000 INFO @ Fri, 10 Dec 2021 11:08:50: 20000000 INFO @ Fri, 10 Dec 2021 11:08:51: 27000000 INFO @ Fri, 10 Dec 2021 11:08:52: 25000000 INFO @ Fri, 10 Dec 2021 11:08:56: 21000000 INFO @ Fri, 10 Dec 2021 11:08:59: 28000000 INFO @ Fri, 10 Dec 2021 11:08:59: 26000000 INFO @ Fri, 10 Dec 2021 11:09:02: 22000000 INFO @ Fri, 10 Dec 2021 11:09:05: 27000000 INFO @ Fri, 10 Dec 2021 11:09:06: 29000000 INFO @ Fri, 10 Dec 2021 11:09:08: 23000000 INFO @ Fri, 10 Dec 2021 11:09:12: 28000000 INFO @ Fri, 10 Dec 2021 11:09:13: 30000000 INFO @ Fri, 10 Dec 2021 11:09:15: 24000000 INFO @ Fri, 10 Dec 2021 11:09:19: 29000000 INFO @ Fri, 10 Dec 2021 11:09:21: 31000000 INFO @ Fri, 10 Dec 2021 11:09:21: 25000000 INFO @ Fri, 10 Dec 2021 11:09:25: 30000000 INFO @ Fri, 10 Dec 2021 11:09:27: 26000000 INFO @ Fri, 10 Dec 2021 11:09:28: 32000000 INFO @ Fri, 10 Dec 2021 11:09:32: 31000000 INFO @ Fri, 10 Dec 2021 11:09:34: 27000000 INFO @ Fri, 10 Dec 2021 11:09:35: 33000000 INFO @ Fri, 10 Dec 2021 11:09:38: 32000000 INFO @ Fri, 10 Dec 2021 11:09:40: 28000000 INFO @ Fri, 10 Dec 2021 11:09:42: 34000000 INFO @ Fri, 10 Dec 2021 11:09:45: 33000000 INFO @ Fri, 10 Dec 2021 11:09:47: 29000000 INFO @ Fri, 10 Dec 2021 11:09:49: 35000000 INFO @ Fri, 10 Dec 2021 11:09:51: 34000000 INFO @ Fri, 10 Dec 2021 11:09:53: 30000000 INFO @ Fri, 10 Dec 2021 11:09:57: 36000000 INFO @ Fri, 10 Dec 2021 11:09:58: 35000000 INFO @ Fri, 10 Dec 2021 11:09:59: 31000000 INFO @ Fri, 10 Dec 2021 11:10:04: 37000000 INFO @ Fri, 10 Dec 2021 11:10:04: 36000000 INFO @ Fri, 10 Dec 2021 11:10:06: 32000000 INFO @ Fri, 10 Dec 2021 11:10:11: 37000000 INFO @ Fri, 10 Dec 2021 11:10:11: 38000000 INFO @ Fri, 10 Dec 2021 11:10:12: 33000000 INFO @ Fri, 10 Dec 2021 11:10:17: 38000000 INFO @ Fri, 10 Dec 2021 11:10:18: 39000000 INFO @ Fri, 10 Dec 2021 11:10:19: 34000000 INFO @ Fri, 10 Dec 2021 11:10:24: 39000000 INFO @ Fri, 10 Dec 2021 11:10:25: 35000000 INFO @ Fri, 10 Dec 2021 11:10:25: 40000000 INFO @ Fri, 10 Dec 2021 11:10:30: 40000000 INFO @ Fri, 10 Dec 2021 11:10:31: 36000000 INFO @ Fri, 10 Dec 2021 11:10:33: 41000000 INFO @ Fri, 10 Dec 2021 11:10:37: 41000000 INFO @ Fri, 10 Dec 2021 11:10:38: 37000000 INFO @ Fri, 10 Dec 2021 11:10:40: 42000000 INFO @ Fri, 10 Dec 2021 11:10:43: 42000000 INFO @ Fri, 10 Dec 2021 11:10:44: 38000000 INFO @ Fri, 10 Dec 2021 11:10:47: 43000000 INFO @ Fri, 10 Dec 2021 11:10:50: 43000000 INFO @ Fri, 10 Dec 2021 11:10:50: 39000000 INFO @ Fri, 10 Dec 2021 11:10:54: 44000000 INFO @ Fri, 10 Dec 2021 11:10:56: 44000000 INFO @ Fri, 10 Dec 2021 11:10:57: 40000000 INFO @ Fri, 10 Dec 2021 11:11:01: 45000000 INFO @ Fri, 10 Dec 2021 11:11:02: 45000000 INFO @ Fri, 10 Dec 2021 11:11:03: 41000000 INFO @ Fri, 10 Dec 2021 11:11:08: 46000000 INFO @ Fri, 10 Dec 2021 11:11:09: 46000000 INFO @ Fri, 10 Dec 2021 11:11:09: 42000000 INFO @ Fri, 10 Dec 2021 11:11:16: 47000000 INFO @ Fri, 10 Dec 2021 11:11:16: 43000000 INFO @ Fri, 10 Dec 2021 11:11:16: 47000000 INFO @ Fri, 10 Dec 2021 11:11:22: 44000000 INFO @ Fri, 10 Dec 2021 11:11:23: 48000000 INFO @ Fri, 10 Dec 2021 11:11:23: 48000000 INFO @ Fri, 10 Dec 2021 11:11:28: 45000000 INFO @ Fri, 10 Dec 2021 11:11:31: 49000000 INFO @ Fri, 10 Dec 2021 11:11:31: 49000000 INFO @ Fri, 10 Dec 2021 11:11:34: 46000000 INFO @ Fri, 10 Dec 2021 11:11:39: 50000000 INFO @ Fri, 10 Dec 2021 11:11:39: 50000000 INFO @ Fri, 10 Dec 2021 11:11:40: 47000000 INFO @ Fri, 10 Dec 2021 11:11:46: 51000000 INFO @ Fri, 10 Dec 2021 11:11:46: 48000000 INFO @ Fri, 10 Dec 2021 11:11:47: 51000000 INFO @ Fri, 10 Dec 2021 11:11:52: 52000000 INFO @ Fri, 10 Dec 2021 11:11:53: 49000000 INFO @ Fri, 10 Dec 2021 11:11:54: 52000000 INFO @ Fri, 10 Dec 2021 11:11:58: 53000000 INFO @ Fri, 10 Dec 2021 11:11:59: 50000000 INFO @ Fri, 10 Dec 2021 11:12:01: 53000000 INFO @ Fri, 10 Dec 2021 11:12:05: 54000000 INFO @ Fri, 10 Dec 2021 11:12:06: 51000000 INFO @ Fri, 10 Dec 2021 11:12:08: 54000000 INFO @ Fri, 10 Dec 2021 11:12:11: 55000000 INFO @ Fri, 10 Dec 2021 11:12:12: 52000000 INFO @ Fri, 10 Dec 2021 11:12:15: 55000000 INFO @ Fri, 10 Dec 2021 11:12:17: 56000000 INFO @ Fri, 10 Dec 2021 11:12:18: 53000000 INFO @ Fri, 10 Dec 2021 11:12:22: 56000000 INFO @ Fri, 10 Dec 2021 11:12:24: 57000000 INFO @ Fri, 10 Dec 2021 11:12:24: 54000000 INFO @ Fri, 10 Dec 2021 11:12:30: 58000000 INFO @ Fri, 10 Dec 2021 11:12:30: 57000000 INFO @ Fri, 10 Dec 2021 11:12:30: 55000000 INFO @ Fri, 10 Dec 2021 11:12:36: 59000000 INFO @ Fri, 10 Dec 2021 11:12:36: 56000000 INFO @ Fri, 10 Dec 2021 11:12:36: 58000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 11:12:42: 60000000 INFO @ Fri, 10 Dec 2021 11:12:43: 57000000 INFO @ Fri, 10 Dec 2021 11:12:44: 59000000 INFO @ Fri, 10 Dec 2021 11:12:48: 61000000 INFO @ Fri, 10 Dec 2021 11:12:49: 58000000 INFO @ Fri, 10 Dec 2021 11:12:51: 60000000 INFO @ Fri, 10 Dec 2021 11:12:54: 62000000 INFO @ Fri, 10 Dec 2021 11:12:55: 59000000 INFO @ Fri, 10 Dec 2021 11:12:57: 61000000 INFO @ Fri, 10 Dec 2021 11:13:01: 63000000 INFO @ Fri, 10 Dec 2021 11:13:01: 60000000 INFO @ Fri, 10 Dec 2021 11:13:05: 62000000 INFO @ Fri, 10 Dec 2021 11:13:07: 64000000 INFO @ Fri, 10 Dec 2021 11:13:07: 61000000 INFO @ Fri, 10 Dec 2021 11:13:12: 63000000 INFO @ Fri, 10 Dec 2021 11:13:13: 65000000 INFO @ Fri, 10 Dec 2021 11:13:13: 62000000 INFO @ Fri, 10 Dec 2021 11:13:19: 64000000 INFO @ Fri, 10 Dec 2021 11:13:19: 66000000 INFO @ Fri, 10 Dec 2021 11:13:20: 63000000 INFO @ Fri, 10 Dec 2021 11:13:25: 67000000 INFO @ Fri, 10 Dec 2021 11:13:26: 64000000 INFO @ Fri, 10 Dec 2021 11:13:26: 65000000 INFO @ Fri, 10 Dec 2021 11:13:31: 68000000 INFO @ Fri, 10 Dec 2021 11:13:32: 65000000 INFO @ Fri, 10 Dec 2021 11:13:32: 66000000 INFO @ Fri, 10 Dec 2021 11:13:37: 69000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 11:13:38: 66000000 INFO @ Fri, 10 Dec 2021 11:13:39: 67000000 INFO @ Fri, 10 Dec 2021 11:13:43: 70000000 INFO @ Fri, 10 Dec 2021 11:13:44: 67000000 INFO @ Fri, 10 Dec 2021 11:13:47: 68000000 INFO @ Fri, 10 Dec 2021 11:13:49: 71000000 INFO @ Fri, 10 Dec 2021 11:13:50: 68000000 INFO @ Fri, 10 Dec 2021 11:13:53: 69000000 INFO @ Fri, 10 Dec 2021 11:13:56: 72000000 INFO @ Fri, 10 Dec 2021 11:13:56: 69000000 INFO @ Fri, 10 Dec 2021 11:14:00: 70000000 INFO @ Fri, 10 Dec 2021 11:14:02: 73000000 INFO @ Fri, 10 Dec 2021 11:14:02: 70000000 INFO @ Fri, 10 Dec 2021 11:14:07: 71000000 INFO @ Fri, 10 Dec 2021 11:14:08: 74000000 INFO @ Fri, 10 Dec 2021 11:14:08: 71000000 INFO @ Fri, 10 Dec 2021 11:14:14: 75000000 INFO @ Fri, 10 Dec 2021 11:14:14: 72000000 INFO @ Fri, 10 Dec 2021 11:14:15: 72000000 INFO @ Fri, 10 Dec 2021 11:14:20: 76000000 INFO @ Fri, 10 Dec 2021 11:14:22: 73000000 INFO @ Fri, 10 Dec 2021 11:14:22: 73000000 INFO @ Fri, 10 Dec 2021 11:14:26: 77000000 INFO @ Fri, 10 Dec 2021 11:14:30: 74000000 INFO @ Fri, 10 Dec 2021 11:14:30: 74000000 INFO @ Fri, 10 Dec 2021 11:14:33: 78000000 INFO @ Fri, 10 Dec 2021 11:14:37: 75000000 INFO @ Fri, 10 Dec 2021 11:14:38: 75000000 INFO @ Fri, 10 Dec 2021 11:14:39: 79000000 INFO @ Fri, 10 Dec 2021 11:14:44: 76000000 INFO @ Fri, 10 Dec 2021 11:14:45: 80000000 INFO @ Fri, 10 Dec 2021 11:14:45: 76000000 INFO @ Fri, 10 Dec 2021 11:14:50: 77000000 INFO @ Fri, 10 Dec 2021 11:14:51: 81000000 INFO @ Fri, 10 Dec 2021 11:14:52: 77000000 INFO @ Fri, 10 Dec 2021 11:14:57: 78000000 INFO @ Fri, 10 Dec 2021 11:14:58: 82000000 INFO @ Fri, 10 Dec 2021 11:15:00: 78000000 INFO @ Fri, 10 Dec 2021 11:15:03: 79000000 INFO @ Fri, 10 Dec 2021 11:15:04: 83000000 INFO @ Fri, 10 Dec 2021 11:15:07: 79000000 INFO @ Fri, 10 Dec 2021 11:15:09: 80000000 INFO @ Fri, 10 Dec 2021 11:15:10: 84000000 INFO @ Fri, 10 Dec 2021 11:15:14: 80000000 INFO @ Fri, 10 Dec 2021 11:15:16: 81000000 INFO @ Fri, 10 Dec 2021 11:15:17: 85000000 INFO @ Fri, 10 Dec 2021 11:15:21: 81000000 INFO @ Fri, 10 Dec 2021 11:15:22: 82000000 INFO @ Fri, 10 Dec 2021 11:15:23: 86000000 INFO @ Fri, 10 Dec 2021 11:15:28: 82000000 INFO @ Fri, 10 Dec 2021 11:15:28: 83000000 INFO @ Fri, 10 Dec 2021 11:15:29: 87000000 INFO @ Fri, 10 Dec 2021 11:15:34: 84000000 INFO @ Fri, 10 Dec 2021 11:15:35: 83000000 INFO @ Fri, 10 Dec 2021 11:15:36: 88000000 INFO @ Fri, 10 Dec 2021 11:15:41: 85000000 INFO @ Fri, 10 Dec 2021 11:15:42: 89000000 INFO @ Fri, 10 Dec 2021 11:15:42: 84000000 INFO @ Fri, 10 Dec 2021 11:15:47: 86000000 INFO @ Fri, 10 Dec 2021 11:15:48: 90000000 INFO @ Fri, 10 Dec 2021 11:15:49: 85000000 INFO @ Fri, 10 Dec 2021 11:15:53: 87000000 INFO @ Fri, 10 Dec 2021 11:15:54: 91000000 INFO @ Fri, 10 Dec 2021 11:15:56: 86000000 INFO @ Fri, 10 Dec 2021 11:16:00: 88000000 INFO @ Fri, 10 Dec 2021 11:16:00: 92000000 INFO @ Fri, 10 Dec 2021 11:16:04: 87000000 INFO @ Fri, 10 Dec 2021 11:16:06: 89000000 INFO @ Fri, 10 Dec 2021 11:16:06: 93000000 INFO @ Fri, 10 Dec 2021 11:16:11: 88000000 INFO @ Fri, 10 Dec 2021 11:16:12: 90000000 INFO @ Fri, 10 Dec 2021 11:16:12: 94000000 INFO @ Fri, 10 Dec 2021 11:16:18: 89000000 INFO @ Fri, 10 Dec 2021 11:16:18: 91000000 INFO @ Fri, 10 Dec 2021 11:16:18: 95000000 INFO @ Fri, 10 Dec 2021 11:16:24: 92000000 INFO @ Fri, 10 Dec 2021 11:16:24: 96000000 INFO @ Fri, 10 Dec 2021 11:16:24: 90000000 INFO @ Fri, 10 Dec 2021 11:16:30: 93000000 INFO @ Fri, 10 Dec 2021 11:16:31: 97000000 INFO @ Fri, 10 Dec 2021 11:16:31: 91000000 INFO @ Fri, 10 Dec 2021 11:16:36: 94000000 INFO @ Fri, 10 Dec 2021 11:16:37: 98000000 INFO @ Fri, 10 Dec 2021 11:16:38: 92000000 INFO @ Fri, 10 Dec 2021 11:16:42: 95000000 INFO @ Fri, 10 Dec 2021 11:16:43: 99000000 INFO @ Fri, 10 Dec 2021 11:16:45: 93000000 INFO @ Fri, 10 Dec 2021 11:16:48: 96000000 INFO @ Fri, 10 Dec 2021 11:16:49: 100000000 INFO @ Fri, 10 Dec 2021 11:16:52: 94000000 INFO @ Fri, 10 Dec 2021 11:16:54: 97000000 INFO @ Fri, 10 Dec 2021 11:16:55: 101000000 INFO @ Fri, 10 Dec 2021 11:16:59: 95000000 INFO @ Fri, 10 Dec 2021 11:17:01: 98000000 INFO @ Fri, 10 Dec 2021 11:17:01: 102000000 INFO @ Fri, 10 Dec 2021 11:17:06: 96000000 INFO @ Fri, 10 Dec 2021 11:17:07: 99000000 INFO @ Fri, 10 Dec 2021 11:17:07: 103000000 INFO @ Fri, 10 Dec 2021 11:17:13: 100000000 INFO @ Fri, 10 Dec 2021 11:17:13: 97000000 INFO @ Fri, 10 Dec 2021 11:17:14: 104000000 INFO @ Fri, 10 Dec 2021 11:17:19: 101000000 INFO @ Fri, 10 Dec 2021 11:17:20: 98000000 INFO @ Fri, 10 Dec 2021 11:17:21: 105000000 INFO @ Fri, 10 Dec 2021 11:17:25: 102000000 INFO @ Fri, 10 Dec 2021 11:17:27: 99000000 INFO @ Fri, 10 Dec 2021 11:17:28: 106000000 INFO @ Fri, 10 Dec 2021 11:17:31: 103000000 INFO @ Fri, 10 Dec 2021 11:17:34: 100000000 INFO @ Fri, 10 Dec 2021 11:17:35: 107000000 INFO @ Fri, 10 Dec 2021 11:17:38: 104000000 INFO @ Fri, 10 Dec 2021 11:17:41: 101000000 INFO @ Fri, 10 Dec 2021 11:17:41: 108000000 INFO @ Fri, 10 Dec 2021 11:17:44: 105000000 INFO @ Fri, 10 Dec 2021 11:17:48: 109000000 INFO @ Fri, 10 Dec 2021 11:17:48: 102000000 INFO @ Fri, 10 Dec 2021 11:17:51: 106000000 INFO @ Fri, 10 Dec 2021 11:17:54: 110000000 INFO @ Fri, 10 Dec 2021 11:17:55: 103000000 INFO @ Fri, 10 Dec 2021 11:17:58: 107000000 INFO @ Fri, 10 Dec 2021 11:18:00: 111000000 INFO @ Fri, 10 Dec 2021 11:18:02: 104000000 INFO @ Fri, 10 Dec 2021 11:18:05: 108000000 INFO @ Fri, 10 Dec 2021 11:18:06: 112000000 INFO @ Fri, 10 Dec 2021 11:18:10: 105000000 INFO @ Fri, 10 Dec 2021 11:18:11: 109000000 INFO @ Fri, 10 Dec 2021 11:18:12: 113000000 INFO @ Fri, 10 Dec 2021 11:18:17: 110000000 INFO @ Fri, 10 Dec 2021 11:18:18: 106000000 INFO @ Fri, 10 Dec 2021 11:18:19: 114000000 INFO @ Fri, 10 Dec 2021 11:18:24: 111000000 INFO @ Fri, 10 Dec 2021 11:18:25: 115000000 INFO @ Fri, 10 Dec 2021 11:18:26: 107000000 INFO @ Fri, 10 Dec 2021 11:18:30: 112000000 INFO @ Fri, 10 Dec 2021 11:18:31: 116000000 INFO @ Fri, 10 Dec 2021 11:18:33: 108000000 INFO @ Fri, 10 Dec 2021 11:18:36: 113000000 INFO @ Fri, 10 Dec 2021 11:18:37: 117000000 INFO @ Fri, 10 Dec 2021 11:18:40: 109000000 INFO @ Fri, 10 Dec 2021 11:18:42: 114000000 INFO @ Fri, 10 Dec 2021 11:18:43: 118000000 INFO @ Fri, 10 Dec 2021 11:18:47: 110000000 INFO @ Fri, 10 Dec 2021 11:18:48: 115000000 INFO @ Fri, 10 Dec 2021 11:18:49: 119000000 INFO @ Fri, 10 Dec 2021 11:18:54: 111000000 INFO @ Fri, 10 Dec 2021 11:18:55: 116000000 INFO @ Fri, 10 Dec 2021 11:18:56: 120000000 INFO @ Fri, 10 Dec 2021 11:19:01: 117000000 INFO @ Fri, 10 Dec 2021 11:19:01: 112000000 INFO @ Fri, 10 Dec 2021 11:19:02: 121000000 INFO @ Fri, 10 Dec 2021 11:19:07: 118000000 INFO @ Fri, 10 Dec 2021 11:19:08: 122000000 INFO @ Fri, 10 Dec 2021 11:19:08: 113000000 INFO @ Fri, 10 Dec 2021 11:19:13: 119000000 INFO @ Fri, 10 Dec 2021 11:19:15: 123000000 INFO @ Fri, 10 Dec 2021 11:19:16: 114000000 INFO @ Fri, 10 Dec 2021 11:19:19: 120000000 INFO @ Fri, 10 Dec 2021 11:19:20: 124000000 INFO @ Fri, 10 Dec 2021 11:19:23: 115000000 INFO @ Fri, 10 Dec 2021 11:19:25: 121000000 INFO @ Fri, 10 Dec 2021 11:19:27: 125000000 INFO @ Fri, 10 Dec 2021 11:19:30: 116000000 INFO @ Fri, 10 Dec 2021 11:19:31: 122000000 INFO @ Fri, 10 Dec 2021 11:19:33: 126000000 INFO @ Fri, 10 Dec 2021 11:19:37: 117000000 INFO @ Fri, 10 Dec 2021 11:19:38: 123000000 INFO @ Fri, 10 Dec 2021 11:19:39: 127000000 INFO @ Fri, 10 Dec 2021 11:19:43: 124000000 INFO @ Fri, 10 Dec 2021 11:19:44: 118000000 INFO @ Fri, 10 Dec 2021 11:19:45: 128000000 INFO @ Fri, 10 Dec 2021 11:19:46: #1 tag size is determined as 69 bps INFO @ Fri, 10 Dec 2021 11:19:46: #1 tag size = 69 INFO @ Fri, 10 Dec 2021 11:19:46: #1 total tags in treatment: 9134 INFO @ Fri, 10 Dec 2021 11:19:46: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 11:19:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 11:19:46: #1 tags after filtering in treatment: 8560 INFO @ Fri, 10 Dec 2021 11:19:46: #1 Redundant rate of treatment: 0.06 INFO @ Fri, 10 Dec 2021 11:19:46: #1 finished! INFO @ Fri, 10 Dec 2021 11:19:46: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 11:19:46: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 11:19:46: #2 number of paired peaks: 126 WARNING @ Fri, 10 Dec 2021 11:19:46: Fewer paired peaks (126) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 126 pairs to build model! INFO @ Fri, 10 Dec 2021 11:19:46: start model_add_line... INFO @ Fri, 10 Dec 2021 11:19:46: start X-correlation... INFO @ Fri, 10 Dec 2021 11:19:46: end of X-cor INFO @ Fri, 10 Dec 2021 11:19:46: #2 finished! INFO @ Fri, 10 Dec 2021 11:19:46: #2 predicted fragment length is 170 bps INFO @ Fri, 10 Dec 2021 11:19:46: #2 alternative fragment length(s) may be 128,170,188,236,292,331,398,442 bps INFO @ Fri, 10 Dec 2021 11:19:46: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.10_model.r INFO @ Fri, 10 Dec 2021 11:19:46: #3 Call peaks... INFO @ Fri, 10 Dec 2021 11:19:46: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 11:19:46: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 11:19:46: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.10_peaks.xls INFO @ Fri, 10 Dec 2021 11:19:46: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 11:19:46: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.10_summits.bed INFO @ Fri, 10 Dec 2021 11:19:46: Done! pass1 - making usageList (1 chroms): 1 millis pass2 - checking and writing primary data (6 records, 4 fields): 17 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 11:19:49: 125000000 INFO @ Fri, 10 Dec 2021 11:19:51: 119000000 INFO @ Fri, 10 Dec 2021 11:19:55: 126000000 INFO @ Fri, 10 Dec 2021 11:19:58: 120000000 INFO @ Fri, 10 Dec 2021 11:20:01: 127000000 INFO @ Fri, 10 Dec 2021 11:20:05: 121000000 INFO @ Fri, 10 Dec 2021 11:20:07: 128000000 INFO @ Fri, 10 Dec 2021 11:20:08: #1 tag size is determined as 69 bps INFO @ Fri, 10 Dec 2021 11:20:08: #1 tag size = 69 INFO @ Fri, 10 Dec 2021 11:20:08: #1 total tags in treatment: 9134 INFO @ Fri, 10 Dec 2021 11:20:08: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 11:20:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 11:20:08: #1 tags after filtering in treatment: 8560 INFO @ Fri, 10 Dec 2021 11:20:08: #1 Redundant rate of treatment: 0.06 INFO @ Fri, 10 Dec 2021 11:20:08: #1 finished! INFO @ Fri, 10 Dec 2021 11:20:08: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 11:20:08: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 11:20:08: #2 number of paired peaks: 126 WARNING @ Fri, 10 Dec 2021 11:20:08: Fewer paired peaks (126) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 126 pairs to build model! INFO @ Fri, 10 Dec 2021 11:20:08: start model_add_line... INFO @ Fri, 10 Dec 2021 11:20:08: start X-correlation... INFO @ Fri, 10 Dec 2021 11:20:08: end of X-cor INFO @ Fri, 10 Dec 2021 11:20:08: #2 finished! INFO @ Fri, 10 Dec 2021 11:20:08: #2 predicted fragment length is 170 bps INFO @ Fri, 10 Dec 2021 11:20:08: #2 alternative fragment length(s) may be 128,170,188,236,292,331,398,442 bps INFO @ Fri, 10 Dec 2021 11:20:08: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.20_model.r INFO @ Fri, 10 Dec 2021 11:20:08: #3 Call peaks... INFO @ Fri, 10 Dec 2021 11:20:08: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 11:20:08: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 11:20:08: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.20_peaks.xls INFO @ Fri, 10 Dec 2021 11:20:08: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 11:20:08: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.20_summits.bed INFO @ Fri, 10 Dec 2021 11:20:08: Done! pass1 - making usageList (1 chroms): 1 millis pass2 - checking and writing primary data (2 records, 4 fields): 1 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 11:20:11: 122000000 INFO @ Fri, 10 Dec 2021 11:20:18: 123000000 INFO @ Fri, 10 Dec 2021 11:20:23: 124000000 INFO @ Fri, 10 Dec 2021 11:20:30: 125000000 INFO @ Fri, 10 Dec 2021 11:20:36: 126000000 INFO @ Fri, 10 Dec 2021 11:20:42: 127000000 INFO @ Fri, 10 Dec 2021 11:20:48: 128000000 INFO @ Fri, 10 Dec 2021 11:20:49: #1 tag size is determined as 69 bps INFO @ Fri, 10 Dec 2021 11:20:49: #1 tag size = 69 INFO @ Fri, 10 Dec 2021 11:20:49: #1 total tags in treatment: 9134 INFO @ Fri, 10 Dec 2021 11:20:49: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 11:20:49: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 11:20:49: #1 tags after filtering in treatment: 8560 INFO @ Fri, 10 Dec 2021 11:20:49: #1 Redundant rate of treatment: 0.06 INFO @ Fri, 10 Dec 2021 11:20:49: #1 finished! INFO @ Fri, 10 Dec 2021 11:20:49: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 11:20:49: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 11:20:49: #2 number of paired peaks: 126 WARNING @ Fri, 10 Dec 2021 11:20:49: Fewer paired peaks (126) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 126 pairs to build model! INFO @ Fri, 10 Dec 2021 11:20:49: start model_add_line... INFO @ Fri, 10 Dec 2021 11:20:49: start X-correlation... INFO @ Fri, 10 Dec 2021 11:20:49: end of X-cor INFO @ Fri, 10 Dec 2021 11:20:49: #2 finished! INFO @ Fri, 10 Dec 2021 11:20:49: #2 predicted fragment length is 170 bps INFO @ Fri, 10 Dec 2021 11:20:49: #2 alternative fragment length(s) may be 128,170,188,236,292,331,398,442 bps INFO @ Fri, 10 Dec 2021 11:20:49: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.05_model.r INFO @ Fri, 10 Dec 2021 11:20:49: #3 Call peaks... INFO @ Fri, 10 Dec 2021 11:20:49: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 11:20:49: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 11:20:49: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.05_peaks.xls INFO @ Fri, 10 Dec 2021 11:20:49: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 11:20:49: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9717928/SRX9717928.05_summits.bed INFO @ Fri, 10 Dec 2021 11:20:49: Done! pass1 - making usageList (1 chroms): 1 millis pass2 - checking and writing primary data (7 records, 4 fields): 1 millis CompletedMACS2peakCalling