Job ID = 14171442 SRX = SRX9689643 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 38271762 spots for SRR13258884/SRR13258884.sra Written 38271762 spots for SRR13258884/SRR13258884.sra Read 39357994 spots for SRR13258885/SRR13258885.sra Written 39357994 spots for SRR13258885/SRR13258885.sra Read 40461318 spots for SRR13258886/SRR13258886.sra Written 40461318 spots for SRR13258886/SRR13258886.sra Read 39867829 spots for SRR13258887/SRR13258887.sra Written 39867829 spots for SRR13258887/SRR13258887.sra fastq に変換しました。 bowtie でマッピング中... Your job 14173815 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 07:48:35 157958903 reads; of these: 157958903 (100.00%) were paired; of these: 87948651 (55.68%) aligned concordantly 0 times 51421251 (32.55%) aligned concordantly exactly 1 time 18589001 (11.77%) aligned concordantly >1 times ---- 87948651 pairs aligned concordantly 0 times; of these: 10717905 (12.19%) aligned discordantly 1 time ---- 77230746 pairs aligned 0 times concordantly or discordantly; of these: 154461492 mates make up the pairs; of these: 128203670 (83.00%) aligned 0 times 4326511 (2.80%) aligned exactly 1 time 21931311 (14.20%) aligned >1 times 59.42% overall alignment rate Time searching: 07:48:36 Overall time: 07:48:36 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 80 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 44832993 / 79797640 = 0.5618 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 21:05:24: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 21:05:24: #1 read tag files... INFO @ Sat, 11 Dec 2021 21:05:24: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 21:05:34: 1000000 INFO @ Sat, 11 Dec 2021 21:05:45: 2000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 21:05:53: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 21:05:53: #1 read tag files... INFO @ Sat, 11 Dec 2021 21:05:53: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 21:05:55: 3000000 INFO @ Sat, 11 Dec 2021 21:06:05: 1000000 INFO @ Sat, 11 Dec 2021 21:06:07: 4000000 INFO @ Sat, 11 Dec 2021 21:06:16: 2000000 INFO @ Sat, 11 Dec 2021 21:06:18: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 21:06:23: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 21:06:23: #1 read tag files... INFO @ Sat, 11 Dec 2021 21:06:23: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 21:06:27: 3000000 INFO @ Sat, 11 Dec 2021 21:06:30: 6000000 INFO @ Sat, 11 Dec 2021 21:06:34: 1000000 INFO @ Sat, 11 Dec 2021 21:06:39: 4000000 INFO @ Sat, 11 Dec 2021 21:06:42: 7000000 INFO @ Sat, 11 Dec 2021 21:06:44: 2000000 INFO @ Sat, 11 Dec 2021 21:06:51: 5000000 INFO @ Sat, 11 Dec 2021 21:06:54: 8000000 INFO @ Sat, 11 Dec 2021 21:06:54: 3000000 INFO @ Sat, 11 Dec 2021 21:07:02: 6000000 INFO @ Sat, 11 Dec 2021 21:07:04: 4000000 INFO @ Sat, 11 Dec 2021 21:07:06: 9000000 INFO @ Sat, 11 Dec 2021 21:07:14: 7000000 INFO @ Sat, 11 Dec 2021 21:07:15: 5000000 INFO @ Sat, 11 Dec 2021 21:07:18: 10000000 INFO @ Sat, 11 Dec 2021 21:07:25: 6000000 INFO @ Sat, 11 Dec 2021 21:07:25: 8000000 INFO @ Sat, 11 Dec 2021 21:07:29: 11000000 INFO @ Sat, 11 Dec 2021 21:07:35: 7000000 INFO @ Sat, 11 Dec 2021 21:07:36: 9000000 INFO @ Sat, 11 Dec 2021 21:07:40: 12000000 INFO @ Sat, 11 Dec 2021 21:07:45: 8000000 INFO @ Sat, 11 Dec 2021 21:07:47: 10000000 INFO @ Sat, 11 Dec 2021 21:07:51: 13000000 INFO @ Sat, 11 Dec 2021 21:07:55: 9000000 INFO @ Sat, 11 Dec 2021 21:07:58: 11000000 INFO @ Sat, 11 Dec 2021 21:08:02: 14000000 INFO @ Sat, 11 Dec 2021 21:08:05: 10000000 INFO @ Sat, 11 Dec 2021 21:08:09: 12000000 INFO @ Sat, 11 Dec 2021 21:08:13: 15000000 INFO @ Sat, 11 Dec 2021 21:08:15: 11000000 INFO @ Sat, 11 Dec 2021 21:08:21: 13000000 INFO @ Sat, 11 Dec 2021 21:08:25: 12000000 INFO @ Sat, 11 Dec 2021 21:08:25: 16000000 INFO @ Sat, 11 Dec 2021 21:08:33: 14000000 INFO @ Sat, 11 Dec 2021 21:08:35: 13000000 INFO @ Sat, 11 Dec 2021 21:08:37: 17000000 INFO @ Sat, 11 Dec 2021 21:08:45: 15000000 INFO @ Sat, 11 Dec 2021 21:08:45: 14000000 INFO @ Sat, 11 Dec 2021 21:08:48: 18000000 INFO @ Sat, 11 Dec 2021 21:08:55: 15000000 INFO @ Sat, 11 Dec 2021 21:08:56: 16000000 INFO @ Sat, 11 Dec 2021 21:08:59: 19000000 INFO @ Sat, 11 Dec 2021 21:09:05: 16000000 INFO @ Sat, 11 Dec 2021 21:09:08: 17000000 INFO @ Sat, 11 Dec 2021 21:09:10: 20000000 INFO @ Sat, 11 Dec 2021 21:09:16: 17000000 INFO @ Sat, 11 Dec 2021 21:09:19: 18000000 INFO @ Sat, 11 Dec 2021 21:09:22: 21000000 INFO @ Sat, 11 Dec 2021 21:09:26: 18000000 INFO @ Sat, 11 Dec 2021 21:09:30: 19000000 INFO @ Sat, 11 Dec 2021 21:09:33: 22000000 INFO @ Sat, 11 Dec 2021 21:09:36: 19000000 INFO @ Sat, 11 Dec 2021 21:09:41: 20000000 INFO @ Sat, 11 Dec 2021 21:09:44: 23000000 INFO @ Sat, 11 Dec 2021 21:09:46: 20000000 INFO @ Sat, 11 Dec 2021 21:09:51: 21000000 INFO @ Sat, 11 Dec 2021 21:09:55: 24000000 INFO @ Sat, 11 Dec 2021 21:09:56: 21000000 INFO @ Sat, 11 Dec 2021 21:10:02: 22000000 INFO @ Sat, 11 Dec 2021 21:10:05: 25000000 INFO @ Sat, 11 Dec 2021 21:10:06: 22000000 INFO @ Sat, 11 Dec 2021 21:10:13: 23000000 INFO @ Sat, 11 Dec 2021 21:10:16: 23000000 INFO @ Sat, 11 Dec 2021 21:10:17: 26000000 INFO @ Sat, 11 Dec 2021 21:10:24: 24000000 INFO @ Sat, 11 Dec 2021 21:10:26: 24000000 INFO @ Sat, 11 Dec 2021 21:10:27: 27000000 INFO @ Sat, 11 Dec 2021 21:10:35: 25000000 INFO @ Sat, 11 Dec 2021 21:10:36: 25000000 INFO @ Sat, 11 Dec 2021 21:10:38: 28000000 INFO @ Sat, 11 Dec 2021 21:10:46: 26000000 INFO @ Sat, 11 Dec 2021 21:10:47: 26000000 INFO @ Sat, 11 Dec 2021 21:10:49: 29000000 INFO @ Sat, 11 Dec 2021 21:10:56: 27000000 INFO @ Sat, 11 Dec 2021 21:10:57: 27000000 INFO @ Sat, 11 Dec 2021 21:11:00: 30000000 INFO @ Sat, 11 Dec 2021 21:11:07: 28000000 INFO @ Sat, 11 Dec 2021 21:11:08: 28000000 INFO @ Sat, 11 Dec 2021 21:11:12: 31000000 INFO @ Sat, 11 Dec 2021 21:11:18: 29000000 INFO @ Sat, 11 Dec 2021 21:11:18: 29000000 INFO @ Sat, 11 Dec 2021 21:11:23: 32000000 INFO @ Sat, 11 Dec 2021 21:11:28: 30000000 INFO @ Sat, 11 Dec 2021 21:11:29: 30000000 INFO @ Sat, 11 Dec 2021 21:11:34: 33000000 INFO @ Sat, 11 Dec 2021 21:11:39: 31000000 INFO @ Sat, 11 Dec 2021 21:11:40: 31000000 INFO @ Sat, 11 Dec 2021 21:11:45: 34000000 INFO @ Sat, 11 Dec 2021 21:11:49: 32000000 INFO @ Sat, 11 Dec 2021 21:11:51: 32000000 INFO @ Sat, 11 Dec 2021 21:11:56: 35000000 INFO @ Sat, 11 Dec 2021 21:11:59: 33000000 INFO @ Sat, 11 Dec 2021 21:12:01: 33000000 INFO @ Sat, 11 Dec 2021 21:12:06: 36000000 INFO @ Sat, 11 Dec 2021 21:12:09: 34000000 INFO @ Sat, 11 Dec 2021 21:12:11: 34000000 INFO @ Sat, 11 Dec 2021 21:12:17: 37000000 INFO @ Sat, 11 Dec 2021 21:12:19: 35000000 INFO @ Sat, 11 Dec 2021 21:12:21: 35000000 INFO @ Sat, 11 Dec 2021 21:12:28: 38000000 INFO @ Sat, 11 Dec 2021 21:12:29: 36000000 INFO @ Sat, 11 Dec 2021 21:12:32: 36000000 INFO @ Sat, 11 Dec 2021 21:12:39: 39000000 INFO @ Sat, 11 Dec 2021 21:12:39: 37000000 INFO @ Sat, 11 Dec 2021 21:12:43: 37000000 INFO @ Sat, 11 Dec 2021 21:12:49: 38000000 INFO @ Sat, 11 Dec 2021 21:12:50: 40000000 INFO @ Sat, 11 Dec 2021 21:12:54: 38000000 INFO @ Sat, 11 Dec 2021 21:12:59: 39000000 INFO @ Sat, 11 Dec 2021 21:13:01: 41000000 INFO @ Sat, 11 Dec 2021 21:13:05: 39000000 INFO @ Sat, 11 Dec 2021 21:13:09: 40000000 INFO @ Sat, 11 Dec 2021 21:13:13: 42000000 INFO @ Sat, 11 Dec 2021 21:13:16: 40000000 INFO @ Sat, 11 Dec 2021 21:13:19: 41000000 INFO @ Sat, 11 Dec 2021 21:13:23: 43000000 INFO @ Sat, 11 Dec 2021 21:13:26: 41000000 INFO @ Sat, 11 Dec 2021 21:13:30: 42000000 INFO @ Sat, 11 Dec 2021 21:13:34: 44000000 INFO @ Sat, 11 Dec 2021 21:13:36: 42000000 INFO @ Sat, 11 Dec 2021 21:13:40: 43000000 INFO @ Sat, 11 Dec 2021 21:13:44: 45000000 INFO @ Sat, 11 Dec 2021 21:13:46: 43000000 INFO @ Sat, 11 Dec 2021 21:13:49: 44000000 INFO @ Sat, 11 Dec 2021 21:13:55: 46000000 INFO @ Sat, 11 Dec 2021 21:13:57: 44000000 INFO @ Sat, 11 Dec 2021 21:13:59: 45000000 INFO @ Sat, 11 Dec 2021 21:14:06: 47000000 INFO @ Sat, 11 Dec 2021 21:14:07: 45000000 INFO @ Sat, 11 Dec 2021 21:14:10: 46000000 INFO @ Sat, 11 Dec 2021 21:14:17: 46000000 INFO @ Sat, 11 Dec 2021 21:14:17: 48000000 INFO @ Sat, 11 Dec 2021 21:14:20: 47000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 11 Dec 2021 21:14:28: 49000000 INFO @ Sat, 11 Dec 2021 21:14:29: 47000000 INFO @ Sat, 11 Dec 2021 21:14:30: 48000000 INFO @ Sat, 11 Dec 2021 21:14:39: 50000000 INFO @ Sat, 11 Dec 2021 21:14:39: 48000000 INFO @ Sat, 11 Dec 2021 21:14:40: 49000000 INFO @ Sat, 11 Dec 2021 21:14:50: 49000000 INFO @ Sat, 11 Dec 2021 21:14:50: 51000000 INFO @ Sat, 11 Dec 2021 21:14:51: 50000000 INFO @ Sat, 11 Dec 2021 21:15:01: 50000000 INFO @ Sat, 11 Dec 2021 21:15:01: 51000000 INFO @ Sat, 11 Dec 2021 21:15:01: 52000000 INFO @ Sat, 11 Dec 2021 21:15:11: 52000000 INFO @ Sat, 11 Dec 2021 21:15:11: 51000000 INFO @ Sat, 11 Dec 2021 21:15:13: 53000000 INFO @ Sat, 11 Dec 2021 21:15:21: 53000000 INFO @ Sat, 11 Dec 2021 21:15:22: 52000000 INFO @ Sat, 11 Dec 2021 21:15:24: 54000000 INFO @ Sat, 11 Dec 2021 21:15:32: 54000000 INFO @ Sat, 11 Dec 2021 21:15:32: 53000000 INFO @ Sat, 11 Dec 2021 21:15:34: 55000000 INFO @ Sat, 11 Dec 2021 21:15:42: 55000000 INFO @ Sat, 11 Dec 2021 21:15:42: 54000000 INFO @ Sat, 11 Dec 2021 21:15:46: 56000000 INFO @ Sat, 11 Dec 2021 21:15:52: 55000000 INFO @ Sat, 11 Dec 2021 21:15:53: 56000000 INFO @ Sat, 11 Dec 2021 21:15:56: 57000000 INFO @ Sat, 11 Dec 2021 21:16:03: 56000000 INFO @ Sat, 11 Dec 2021 21:16:03: 57000000 INFO @ Sat, 11 Dec 2021 21:16:07: 58000000 INFO @ Sat, 11 Dec 2021 21:16:13: 58000000 INFO @ Sat, 11 Dec 2021 21:16:13: 57000000 INFO @ Sat, 11 Dec 2021 21:16:18: 59000000 BigWig に変換しました。 INFO @ Sat, 11 Dec 2021 21:16:23: 58000000 INFO @ Sat, 11 Dec 2021 21:16:24: 59000000 INFO @ Sat, 11 Dec 2021 21:16:29: 60000000 INFO @ Sat, 11 Dec 2021 21:16:33: 59000000 INFO @ Sat, 11 Dec 2021 21:16:34: 60000000 INFO @ Sat, 11 Dec 2021 21:16:41: 61000000 INFO @ Sat, 11 Dec 2021 21:16:45: 61000000 INFO @ Sat, 11 Dec 2021 21:16:45: 60000000 INFO @ Sat, 11 Dec 2021 21:16:51: 62000000 INFO @ Sat, 11 Dec 2021 21:16:55: 62000000 INFO @ Sat, 11 Dec 2021 21:16:56: 61000000 INFO @ Sat, 11 Dec 2021 21:17:00: 63000000 INFO @ Sat, 11 Dec 2021 21:17:05: 63000000 INFO @ Sat, 11 Dec 2021 21:17:05: 62000000 INFO @ Sat, 11 Dec 2021 21:17:09: 64000000 INFO @ Sat, 11 Dec 2021 21:17:14: 64000000 INFO @ Sat, 11 Dec 2021 21:17:14: 63000000 INFO @ Sat, 11 Dec 2021 21:17:18: 65000000 INFO @ Sat, 11 Dec 2021 21:17:23: 64000000 INFO @ Sat, 11 Dec 2021 21:17:24: 65000000 INFO @ Sat, 11 Dec 2021 21:17:28: 66000000 INFO @ Sat, 11 Dec 2021 21:17:32: 65000000 INFO @ Sat, 11 Dec 2021 21:17:34: 66000000 INFO @ Sat, 11 Dec 2021 21:17:37: 67000000 INFO @ Sat, 11 Dec 2021 21:17:42: 66000000 INFO @ Sat, 11 Dec 2021 21:17:44: 67000000 INFO @ Sat, 11 Dec 2021 21:17:47: 68000000 INFO @ Sat, 11 Dec 2021 21:17:52: 67000000 INFO @ Sat, 11 Dec 2021 21:17:53: 68000000 INFO @ Sat, 11 Dec 2021 21:17:59: 69000000 INFO @ Sat, 11 Dec 2021 21:18:01: 68000000 INFO @ Sat, 11 Dec 2021 21:18:05: 69000000 INFO @ Sat, 11 Dec 2021 21:18:10: 70000000 INFO @ Sat, 11 Dec 2021 21:18:12: 69000000 INFO @ Sat, 11 Dec 2021 21:18:16: 70000000 INFO @ Sat, 11 Dec 2021 21:18:22: 71000000 INFO @ Sat, 11 Dec 2021 21:18:24: 70000000 INFO @ Sat, 11 Dec 2021 21:18:28: 71000000 INFO @ Sat, 11 Dec 2021 21:18:34: 72000000 INFO @ Sat, 11 Dec 2021 21:18:35: 71000000 INFO @ Sat, 11 Dec 2021 21:18:39: 72000000 INFO @ Sat, 11 Dec 2021 21:18:45: 73000000 INFO @ Sat, 11 Dec 2021 21:18:45: 72000000 INFO @ Sat, 11 Dec 2021 21:18:50: 73000000 INFO @ Sat, 11 Dec 2021 21:18:56: 73000000 INFO @ Sat, 11 Dec 2021 21:18:56: 74000000 INFO @ Sat, 11 Dec 2021 21:19:00: 74000000 INFO @ Sat, 11 Dec 2021 21:19:07: 74000000 INFO @ Sat, 11 Dec 2021 21:19:07: 75000000 INFO @ Sat, 11 Dec 2021 21:19:12: 75000000 INFO @ Sat, 11 Dec 2021 21:19:18: 75000000 INFO @ Sat, 11 Dec 2021 21:19:19: 76000000 INFO @ Sat, 11 Dec 2021 21:19:23: 76000000 INFO @ Sat, 11 Dec 2021 21:19:29: 76000000 INFO @ Sat, 11 Dec 2021 21:19:30: 77000000 INFO @ Sat, 11 Dec 2021 21:19:35: 77000000 INFO @ Sat, 11 Dec 2021 21:19:39: 77000000 INFO @ Sat, 11 Dec 2021 21:19:41: 78000000 INFO @ Sat, 11 Dec 2021 21:19:46: 78000000 INFO @ Sat, 11 Dec 2021 21:19:50: 78000000 INFO @ Sat, 11 Dec 2021 21:19:52: 79000000 INFO @ Sat, 11 Dec 2021 21:19:57: 79000000 INFO @ Sat, 11 Dec 2021 21:20:01: 79000000 INFO @ Sat, 11 Dec 2021 21:20:04: 80000000 INFO @ Sat, 11 Dec 2021 21:20:08: 80000000 INFO @ Sat, 11 Dec 2021 21:20:11: 80000000 INFO @ Sat, 11 Dec 2021 21:20:13: 81000000 INFO @ Sat, 11 Dec 2021 21:20:18: 81000000 INFO @ Sat, 11 Dec 2021 21:20:20: 81000000 INFO @ Sat, 11 Dec 2021 21:20:24: 82000000 INFO @ Sat, 11 Dec 2021 21:20:29: 82000000 INFO @ Sat, 11 Dec 2021 21:20:31: 82000000 INFO @ Sat, 11 Dec 2021 21:20:35: 83000000 INFO @ Sat, 11 Dec 2021 21:20:39: 83000000 INFO @ Sat, 11 Dec 2021 21:20:41: 83000000 INFO @ Sat, 11 Dec 2021 21:20:45: 84000000 INFO @ Sat, 11 Dec 2021 21:20:49: 84000000 INFO @ Sat, 11 Dec 2021 21:20:51: 84000000 INFO @ Sat, 11 Dec 2021 21:20:55: 85000000 INFO @ Sat, 11 Dec 2021 21:20:59: 85000000 INFO @ Sat, 11 Dec 2021 21:21:01: 85000000 INFO @ Sat, 11 Dec 2021 21:21:05: 86000000 INFO @ Sat, 11 Dec 2021 21:21:08: 86000000 INFO @ Sat, 11 Dec 2021 21:21:10: 86000000 INFO @ Sat, 11 Dec 2021 21:21:15: 87000000 INFO @ Sat, 11 Dec 2021 21:21:18: 87000000 INFO @ Sat, 11 Dec 2021 21:21:20: 87000000 INFO @ Sat, 11 Dec 2021 21:21:26: 88000000 INFO @ Sat, 11 Dec 2021 21:21:29: 88000000 INFO @ Sat, 11 Dec 2021 21:21:30: 88000000 INFO @ Sat, 11 Dec 2021 21:21:37: 89000000 INFO @ Sat, 11 Dec 2021 21:21:40: 89000000 INFO @ Sat, 11 Dec 2021 21:21:41: 89000000 INFO @ Sat, 11 Dec 2021 21:21:49: 90000000 INFO @ Sat, 11 Dec 2021 21:21:52: 90000000 INFO @ Sat, 11 Dec 2021 21:21:52: 90000000 INFO @ Sat, 11 Dec 2021 21:22:01: 91000000 INFO @ Sat, 11 Dec 2021 21:22:03: 91000000 INFO @ Sat, 11 Dec 2021 21:22:04: 91000000 INFO @ Sat, 11 Dec 2021 21:22:12: 92000000 INFO @ Sat, 11 Dec 2021 21:22:14: 92000000 INFO @ Sat, 11 Dec 2021 21:22:14: 92000000 INFO @ Sat, 11 Dec 2021 21:22:24: 93000000 INFO @ Sat, 11 Dec 2021 21:22:25: 93000000 INFO @ Sat, 11 Dec 2021 21:22:25: 93000000 INFO @ Sat, 11 Dec 2021 21:22:36: 94000000 INFO @ Sat, 11 Dec 2021 21:22:36: 94000000 INFO @ Sat, 11 Dec 2021 21:22:36: 94000000 INFO @ Sat, 11 Dec 2021 21:22:47: 95000000 INFO @ Sat, 11 Dec 2021 21:22:47: 95000000 INFO @ Sat, 11 Dec 2021 21:22:48: 95000000 INFO @ Sat, 11 Dec 2021 21:22:59: 96000000 INFO @ Sat, 11 Dec 2021 21:22:59: 96000000 INFO @ Sat, 11 Dec 2021 21:22:59: 96000000 INFO @ Sat, 11 Dec 2021 21:23:10: 97000000 INFO @ Sat, 11 Dec 2021 21:23:10: 97000000 INFO @ Sat, 11 Dec 2021 21:23:10: 97000000 INFO @ Sat, 11 Dec 2021 21:23:21: 98000000 INFO @ Sat, 11 Dec 2021 21:23:21: 98000000 INFO @ Sat, 11 Dec 2021 21:23:21: 98000000 INFO @ Sat, 11 Dec 2021 21:23:22: #1 tag size is determined as 79 bps INFO @ Sat, 11 Dec 2021 21:23:22: #1 tag size = 79 INFO @ Sat, 11 Dec 2021 21:23:22: #1 total tags in treatment: 31777824 INFO @ Sat, 11 Dec 2021 21:23:22: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 21:23:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 21:23:22: #1 tag size is determined as 79 bps INFO @ Sat, 11 Dec 2021 21:23:22: #1 tag size = 79 INFO @ Sat, 11 Dec 2021 21:23:22: #1 total tags in treatment: 31777824 INFO @ Sat, 11 Dec 2021 21:23:22: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 21:23:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 21:23:22: #1 tag size is determined as 79 bps INFO @ Sat, 11 Dec 2021 21:23:22: #1 tag size = 79 INFO @ Sat, 11 Dec 2021 21:23:22: #1 total tags in treatment: 31777824 INFO @ Sat, 11 Dec 2021 21:23:22: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 21:23:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 21:23:22: #1 tags after filtering in treatment: 18997361 INFO @ Sat, 11 Dec 2021 21:23:22: #1 Redundant rate of treatment: 0.40 INFO @ Sat, 11 Dec 2021 21:23:22: #1 finished! INFO @ Sat, 11 Dec 2021 21:23:22: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 21:23:22: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 21:23:23: #1 tags after filtering in treatment: 18997361 INFO @ Sat, 11 Dec 2021 21:23:23: #1 Redundant rate of treatment: 0.40 INFO @ Sat, 11 Dec 2021 21:23:23: #1 finished! INFO @ Sat, 11 Dec 2021 21:23:23: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 21:23:23: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 21:23:23: #1 tags after filtering in treatment: 18997361 INFO @ Sat, 11 Dec 2021 21:23:23: #1 Redundant rate of treatment: 0.40 INFO @ Sat, 11 Dec 2021 21:23:23: #1 finished! INFO @ Sat, 11 Dec 2021 21:23:23: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 21:23:23: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 21:23:24: #2 number of paired peaks: 256 WARNING @ Sat, 11 Dec 2021 21:23:24: Fewer paired peaks (256) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 256 pairs to build model! INFO @ Sat, 11 Dec 2021 21:23:24: start model_add_line... INFO @ Sat, 11 Dec 2021 21:23:24: start X-correlation... INFO @ Sat, 11 Dec 2021 21:23:24: #2 number of paired peaks: 256 WARNING @ Sat, 11 Dec 2021 21:23:24: Fewer paired peaks (256) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 256 pairs to build model! INFO @ Sat, 11 Dec 2021 21:23:24: start model_add_line... INFO @ Sat, 11 Dec 2021 21:23:24: end of X-cor INFO @ Sat, 11 Dec 2021 21:23:24: #2 finished! INFO @ Sat, 11 Dec 2021 21:23:24: #2 predicted fragment length is 83 bps INFO @ Sat, 11 Dec 2021 21:23:24: #2 alternative fragment length(s) may be 4,63,83 bps INFO @ Sat, 11 Dec 2021 21:23:24: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.10_model.r WARNING @ Sat, 11 Dec 2021 21:23:24: #2 Since the d (83) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 21:23:24: #2 You may need to consider one of the other alternative d(s): 4,63,83 WARNING @ Sat, 11 Dec 2021 21:23:24: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 21:23:24: #3 Call peaks... INFO @ Sat, 11 Dec 2021 21:23:24: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 21:23:25: #2 number of paired peaks: 256 WARNING @ Sat, 11 Dec 2021 21:23:25: Fewer paired peaks (256) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 256 pairs to build model! INFO @ Sat, 11 Dec 2021 21:23:25: start model_add_line... INFO @ Sat, 11 Dec 2021 21:23:25: start X-correlation... INFO @ Sat, 11 Dec 2021 21:23:25: end of X-cor INFO @ Sat, 11 Dec 2021 21:23:25: #2 finished! INFO @ Sat, 11 Dec 2021 21:23:25: #2 predicted fragment length is 83 bps INFO @ Sat, 11 Dec 2021 21:23:25: #2 alternative fragment length(s) may be 4,63,83 bps INFO @ Sat, 11 Dec 2021 21:23:25: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.20_model.r WARNING @ Sat, 11 Dec 2021 21:23:25: #2 Since the d (83) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 21:23:25: #2 You may need to consider one of the other alternative d(s): 4,63,83 WARNING @ Sat, 11 Dec 2021 21:23:25: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 21:23:25: #3 Call peaks... INFO @ Sat, 11 Dec 2021 21:23:25: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 21:23:25: start X-correlation... INFO @ Sat, 11 Dec 2021 21:23:25: end of X-cor INFO @ Sat, 11 Dec 2021 21:23:25: #2 finished! INFO @ Sat, 11 Dec 2021 21:23:25: #2 predicted fragment length is 83 bps INFO @ Sat, 11 Dec 2021 21:23:25: #2 alternative fragment length(s) may be 4,63,83 bps INFO @ Sat, 11 Dec 2021 21:23:25: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.05_model.r WARNING @ Sat, 11 Dec 2021 21:23:25: #2 Since the d (83) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 21:23:25: #2 You may need to consider one of the other alternative d(s): 4,63,83 WARNING @ Sat, 11 Dec 2021 21:23:25: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 21:23:25: #3 Call peaks... INFO @ Sat, 11 Dec 2021 21:23:25: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 21:24:15: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 21:24:16: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 21:24:17: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 21:24:41: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.20_peaks.xls INFO @ Sat, 11 Dec 2021 21:24:41: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.20_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 21:24:41: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.20_summits.bed INFO @ Sat, 11 Dec 2021 21:24:41: Done! pass1 - making usageList (12 chroms): 1 millis pass2 - checking and writing primary data (2660 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 21:24:42: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.10_peaks.xls INFO @ Sat, 11 Dec 2021 21:24:42: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.10_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 21:24:43: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.10_summits.bed INFO @ Sat, 11 Dec 2021 21:24:43: Done! pass1 - making usageList (15 chroms): 4 millis pass2 - checking and writing primary data (9110 records, 4 fields): 19 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 21:24:43: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.05_peaks.xls INFO @ Sat, 11 Dec 2021 21:24:43: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.05_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 21:24:43: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9689643/SRX9689643.05_summits.bed INFO @ Sat, 11 Dec 2021 21:24:44: Done! pass1 - making usageList (15 chroms): 5 millis pass2 - checking and writing primary data (18970 records, 4 fields): 27 millis CompletedMACS2peakCalling