Job ID = 14170691 SRX = SRX9434488 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 28080391 spots for SRR12982886/SRR12982886.sra Written 28080391 spots for SRR12982886/SRR12982886.sra fastq に変換しました。 bowtie でマッピング中... Your job 14171446 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:05:31 28080391 reads; of these: 28080391 (100.00%) were paired; of these: 2926956 (10.42%) aligned concordantly 0 times 15173186 (54.03%) aligned concordantly exactly 1 time 9980249 (35.54%) aligned concordantly >1 times ---- 2926956 pairs aligned concordantly 0 times; of these: 733674 (25.07%) aligned discordantly 1 time ---- 2193282 pairs aligned 0 times concordantly or discordantly; of these: 4386564 mates make up the pairs; of these: 2011832 (45.86%) aligned 0 times 714064 (16.28%) aligned exactly 1 time 1660668 (37.86%) aligned >1 times 96.42% overall alignment rate Time searching: 01:05:31 Overall time: 01:05:31 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 1893668 / 25862413 = 0.0732 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 09:20:06: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 09:20:06: #1 read tag files... INFO @ Sat, 11 Dec 2021 09:20:06: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 09:20:11: 1000000 INFO @ Sat, 11 Dec 2021 09:20:16: 2000000 INFO @ Sat, 11 Dec 2021 09:20:21: 3000000 INFO @ Sat, 11 Dec 2021 09:20:26: 4000000 INFO @ Sat, 11 Dec 2021 09:20:31: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 09:20:35: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 09:20:35: #1 read tag files... INFO @ Sat, 11 Dec 2021 09:20:35: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 09:20:36: 6000000 INFO @ Sat, 11 Dec 2021 09:20:41: 1000000 INFO @ Sat, 11 Dec 2021 09:20:41: 7000000 INFO @ Sat, 11 Dec 2021 09:20:47: 2000000 INFO @ Sat, 11 Dec 2021 09:20:47: 8000000 INFO @ Sat, 11 Dec 2021 09:20:53: 3000000 INFO @ Sat, 11 Dec 2021 09:20:53: 9000000 INFO @ Sat, 11 Dec 2021 09:20:58: 4000000 INFO @ Sat, 11 Dec 2021 09:20:58: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 09:21:04: 5000000 INFO @ Sat, 11 Dec 2021 09:21:04: 11000000 INFO @ Sat, 11 Dec 2021 09:21:05: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 09:21:05: #1 read tag files... INFO @ Sat, 11 Dec 2021 09:21:05: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 09:21:10: 6000000 INFO @ Sat, 11 Dec 2021 09:21:10: 12000000 INFO @ Sat, 11 Dec 2021 09:21:11: 1000000 INFO @ Sat, 11 Dec 2021 09:21:16: 13000000 INFO @ Sat, 11 Dec 2021 09:21:16: 7000000 INFO @ Sat, 11 Dec 2021 09:21:17: 2000000 INFO @ Sat, 11 Dec 2021 09:21:22: 14000000 INFO @ Sat, 11 Dec 2021 09:21:22: 8000000 INFO @ Sat, 11 Dec 2021 09:21:23: 3000000 INFO @ Sat, 11 Dec 2021 09:21:27: 15000000 INFO @ Sat, 11 Dec 2021 09:21:28: 9000000 INFO @ Sat, 11 Dec 2021 09:21:29: 4000000 INFO @ Sat, 11 Dec 2021 09:21:33: 16000000 INFO @ Sat, 11 Dec 2021 09:21:34: 10000000 INFO @ Sat, 11 Dec 2021 09:21:35: 5000000 INFO @ Sat, 11 Dec 2021 09:21:39: 17000000 INFO @ Sat, 11 Dec 2021 09:21:40: 11000000 INFO @ Sat, 11 Dec 2021 09:21:41: 6000000 INFO @ Sat, 11 Dec 2021 09:21:45: 18000000 INFO @ Sat, 11 Dec 2021 09:21:45: 12000000 INFO @ Sat, 11 Dec 2021 09:21:47: 7000000 INFO @ Sat, 11 Dec 2021 09:21:50: 19000000 INFO @ Sat, 11 Dec 2021 09:21:51: 13000000 INFO @ Sat, 11 Dec 2021 09:21:53: 8000000 INFO @ Sat, 11 Dec 2021 09:21:56: 20000000 INFO @ Sat, 11 Dec 2021 09:21:57: 14000000 INFO @ Sat, 11 Dec 2021 09:21:58: 9000000 INFO @ Sat, 11 Dec 2021 09:22:02: 21000000 INFO @ Sat, 11 Dec 2021 09:22:03: 15000000 INFO @ Sat, 11 Dec 2021 09:22:04: 10000000 INFO @ Sat, 11 Dec 2021 09:22:08: 22000000 INFO @ Sat, 11 Dec 2021 09:22:09: 16000000 INFO @ Sat, 11 Dec 2021 09:22:10: 11000000 INFO @ Sat, 11 Dec 2021 09:22:13: 23000000 INFO @ Sat, 11 Dec 2021 09:22:15: 17000000 INFO @ Sat, 11 Dec 2021 09:22:16: 12000000 INFO @ Sat, 11 Dec 2021 09:22:19: 24000000 INFO @ Sat, 11 Dec 2021 09:22:21: 18000000 INFO @ Sat, 11 Dec 2021 09:22:22: 13000000 INFO @ Sat, 11 Dec 2021 09:22:25: 25000000 INFO @ Sat, 11 Dec 2021 09:22:27: 19000000 INFO @ Sat, 11 Dec 2021 09:22:28: 14000000 INFO @ Sat, 11 Dec 2021 09:22:30: 26000000 INFO @ Sat, 11 Dec 2021 09:22:33: 20000000 INFO @ Sat, 11 Dec 2021 09:22:34: 15000000 INFO @ Sat, 11 Dec 2021 09:22:36: 27000000 INFO @ Sat, 11 Dec 2021 09:22:39: 21000000 INFO @ Sat, 11 Dec 2021 09:22:40: 16000000 INFO @ Sat, 11 Dec 2021 09:22:42: 28000000 INFO @ Sat, 11 Dec 2021 09:22:44: 22000000 INFO @ Sat, 11 Dec 2021 09:22:46: 17000000 INFO @ Sat, 11 Dec 2021 09:22:48: 29000000 INFO @ Sat, 11 Dec 2021 09:22:50: 23000000 INFO @ Sat, 11 Dec 2021 09:22:51: 18000000 INFO @ Sat, 11 Dec 2021 09:22:53: 30000000 INFO @ Sat, 11 Dec 2021 09:22:56: 24000000 INFO @ Sat, 11 Dec 2021 09:22:57: 19000000 INFO @ Sat, 11 Dec 2021 09:22:59: 31000000 INFO @ Sat, 11 Dec 2021 09:23:01: 25000000 INFO @ Sat, 11 Dec 2021 09:23:03: 20000000 INFO @ Sat, 11 Dec 2021 09:23:05: 32000000 INFO @ Sat, 11 Dec 2021 09:23:07: 26000000 INFO @ Sat, 11 Dec 2021 09:23:09: 21000000 INFO @ Sat, 11 Dec 2021 09:23:11: 33000000 INFO @ Sat, 11 Dec 2021 09:23:13: 27000000 INFO @ Sat, 11 Dec 2021 09:23:15: 22000000 INFO @ Sat, 11 Dec 2021 09:23:16: 34000000 INFO @ Sat, 11 Dec 2021 09:23:19: 28000000 INFO @ Sat, 11 Dec 2021 09:23:20: 23000000 INFO @ Sat, 11 Dec 2021 09:23:22: 35000000 INFO @ Sat, 11 Dec 2021 09:23:24: 29000000 INFO @ Sat, 11 Dec 2021 09:23:26: 24000000 INFO @ Sat, 11 Dec 2021 09:23:28: 36000000 INFO @ Sat, 11 Dec 2021 09:23:30: 30000000 INFO @ Sat, 11 Dec 2021 09:23:32: 25000000 INFO @ Sat, 11 Dec 2021 09:23:33: 37000000 INFO @ Sat, 11 Dec 2021 09:23:36: 31000000 INFO @ Sat, 11 Dec 2021 09:23:38: 26000000 INFO @ Sat, 11 Dec 2021 09:23:39: 38000000 INFO @ Sat, 11 Dec 2021 09:23:42: 32000000 INFO @ Sat, 11 Dec 2021 09:23:43: 27000000 INFO @ Sat, 11 Dec 2021 09:23:45: 39000000 INFO @ Sat, 11 Dec 2021 09:23:48: 33000000 INFO @ Sat, 11 Dec 2021 09:23:49: 28000000 INFO @ Sat, 11 Dec 2021 09:23:51: 40000000 INFO @ Sat, 11 Dec 2021 09:23:53: 34000000 INFO @ Sat, 11 Dec 2021 09:23:55: 29000000 INFO @ Sat, 11 Dec 2021 09:23:56: 41000000 INFO @ Sat, 11 Dec 2021 09:23:59: 35000000 INFO @ Sat, 11 Dec 2021 09:24:01: 30000000 INFO @ Sat, 11 Dec 2021 09:24:02: 42000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 11 Dec 2021 09:24:05: 36000000 INFO @ Sat, 11 Dec 2021 09:24:07: 31000000 INFO @ Sat, 11 Dec 2021 09:24:08: 43000000 INFO @ Sat, 11 Dec 2021 09:24:11: 37000000 INFO @ Sat, 11 Dec 2021 09:24:13: 32000000 INFO @ Sat, 11 Dec 2021 09:24:14: 44000000 INFO @ Sat, 11 Dec 2021 09:24:17: 38000000 INFO @ Sat, 11 Dec 2021 09:24:19: 33000000 INFO @ Sat, 11 Dec 2021 09:24:19: 45000000 INFO @ Sat, 11 Dec 2021 09:24:23: 39000000 INFO @ Sat, 11 Dec 2021 09:24:24: 34000000 INFO @ Sat, 11 Dec 2021 09:24:25: 46000000 INFO @ Sat, 11 Dec 2021 09:24:29: 40000000 INFO @ Sat, 11 Dec 2021 09:24:30: 35000000 INFO @ Sat, 11 Dec 2021 09:24:31: 47000000 INFO @ Sat, 11 Dec 2021 09:24:35: 41000000 INFO @ Sat, 11 Dec 2021 09:24:36: 36000000 INFO @ Sat, 11 Dec 2021 09:24:37: 48000000 INFO @ Sat, 11 Dec 2021 09:24:41: 42000000 INFO @ Sat, 11 Dec 2021 09:24:42: 37000000 INFO @ Sat, 11 Dec 2021 09:24:42: 49000000 INFO @ Sat, 11 Dec 2021 09:24:47: 43000000 INFO @ Sat, 11 Dec 2021 09:24:48: 50000000 INFO @ Sat, 11 Dec 2021 09:24:48: 38000000 INFO @ Sat, 11 Dec 2021 09:24:50: #1 tag size is determined as 50 bps INFO @ Sat, 11 Dec 2021 09:24:50: #1 tag size = 50 INFO @ Sat, 11 Dec 2021 09:24:50: #1 total tags in treatment: 23321834 INFO @ Sat, 11 Dec 2021 09:24:50: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 09:24:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 09:24:50: #1 tags after filtering in treatment: 20738916 INFO @ Sat, 11 Dec 2021 09:24:50: #1 Redundant rate of treatment: 0.11 INFO @ Sat, 11 Dec 2021 09:24:50: #1 finished! INFO @ Sat, 11 Dec 2021 09:24:50: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 09:24:50: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 09:24:52: #2 number of paired peaks: 873 WARNING @ Sat, 11 Dec 2021 09:24:52: Fewer paired peaks (873) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 873 pairs to build model! INFO @ Sat, 11 Dec 2021 09:24:52: start model_add_line... INFO @ Sat, 11 Dec 2021 09:24:52: start X-correlation... INFO @ Sat, 11 Dec 2021 09:24:52: end of X-cor INFO @ Sat, 11 Dec 2021 09:24:52: #2 finished! INFO @ Sat, 11 Dec 2021 09:24:52: #2 predicted fragment length is 200 bps INFO @ Sat, 11 Dec 2021 09:24:52: #2 alternative fragment length(s) may be 200 bps INFO @ Sat, 11 Dec 2021 09:24:52: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.05_model.r INFO @ Sat, 11 Dec 2021 09:24:52: #3 Call peaks... INFO @ Sat, 11 Dec 2021 09:24:52: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 09:24:52: 44000000 INFO @ Sat, 11 Dec 2021 09:24:54: 39000000 INFO @ Sat, 11 Dec 2021 09:24:58: 45000000 INFO @ Sat, 11 Dec 2021 09:25:00: 40000000 INFO @ Sat, 11 Dec 2021 09:25:04: 46000000 INFO @ Sat, 11 Dec 2021 09:25:05: 41000000 INFO @ Sat, 11 Dec 2021 09:25:09: 47000000 INFO @ Sat, 11 Dec 2021 09:25:11: 42000000 INFO @ Sat, 11 Dec 2021 09:25:15: 48000000 INFO @ Sat, 11 Dec 2021 09:25:17: 43000000 BigWig に変換しました。 INFO @ Sat, 11 Dec 2021 09:25:21: 49000000 INFO @ Sat, 11 Dec 2021 09:25:23: 44000000 INFO @ Sat, 11 Dec 2021 09:25:26: 50000000 INFO @ Sat, 11 Dec 2021 09:25:28: 45000000 INFO @ Sat, 11 Dec 2021 09:25:28: #1 tag size is determined as 50 bps INFO @ Sat, 11 Dec 2021 09:25:28: #1 tag size = 50 INFO @ Sat, 11 Dec 2021 09:25:28: #1 total tags in treatment: 23321834 INFO @ Sat, 11 Dec 2021 09:25:28: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 09:25:28: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 09:25:29: #1 tags after filtering in treatment: 20738916 INFO @ Sat, 11 Dec 2021 09:25:29: #1 Redundant rate of treatment: 0.11 INFO @ Sat, 11 Dec 2021 09:25:29: #1 finished! INFO @ Sat, 11 Dec 2021 09:25:29: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 09:25:29: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 09:25:30: #2 number of paired peaks: 873 WARNING @ Sat, 11 Dec 2021 09:25:30: Fewer paired peaks (873) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 873 pairs to build model! INFO @ Sat, 11 Dec 2021 09:25:30: start model_add_line... INFO @ Sat, 11 Dec 2021 09:25:30: start X-correlation... INFO @ Sat, 11 Dec 2021 09:25:30: end of X-cor INFO @ Sat, 11 Dec 2021 09:25:30: #2 finished! INFO @ Sat, 11 Dec 2021 09:25:30: #2 predicted fragment length is 200 bps INFO @ Sat, 11 Dec 2021 09:25:30: #2 alternative fragment length(s) may be 200 bps INFO @ Sat, 11 Dec 2021 09:25:30: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.10_model.r INFO @ Sat, 11 Dec 2021 09:25:30: #3 Call peaks... INFO @ Sat, 11 Dec 2021 09:25:30: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 09:25:34: 46000000 INFO @ Sat, 11 Dec 2021 09:25:35: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 09:25:39: 47000000 INFO @ Sat, 11 Dec 2021 09:25:44: 48000000 INFO @ Sat, 11 Dec 2021 09:25:50: 49000000 INFO @ Sat, 11 Dec 2021 09:25:55: 50000000 INFO @ Sat, 11 Dec 2021 09:25:55: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.05_peaks.xls INFO @ Sat, 11 Dec 2021 09:25:55: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.05_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 09:25:55: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.05_summits.bed INFO @ Sat, 11 Dec 2021 09:25:55: Done! pass1 - making usageList (14 chroms): 2 millis pass2 - checking and writing primary data (13575 records, 4 fields): 32 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 09:25:57: #1 tag size is determined as 50 bps INFO @ Sat, 11 Dec 2021 09:25:57: #1 tag size = 50 INFO @ Sat, 11 Dec 2021 09:25:57: #1 total tags in treatment: 23321834 INFO @ Sat, 11 Dec 2021 09:25:57: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 09:25:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 09:25:57: #1 tags after filtering in treatment: 20738916 INFO @ Sat, 11 Dec 2021 09:25:57: #1 Redundant rate of treatment: 0.11 INFO @ Sat, 11 Dec 2021 09:25:57: #1 finished! INFO @ Sat, 11 Dec 2021 09:25:57: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 09:25:57: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 09:25:59: #2 number of paired peaks: 873 WARNING @ Sat, 11 Dec 2021 09:25:59: Fewer paired peaks (873) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 873 pairs to build model! INFO @ Sat, 11 Dec 2021 09:25:59: start model_add_line... INFO @ Sat, 11 Dec 2021 09:25:59: start X-correlation... INFO @ Sat, 11 Dec 2021 09:25:59: end of X-cor INFO @ Sat, 11 Dec 2021 09:25:59: #2 finished! INFO @ Sat, 11 Dec 2021 09:25:59: #2 predicted fragment length is 200 bps INFO @ Sat, 11 Dec 2021 09:25:59: #2 alternative fragment length(s) may be 200 bps INFO @ Sat, 11 Dec 2021 09:25:59: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.20_model.r INFO @ Sat, 11 Dec 2021 09:25:59: #3 Call peaks... INFO @ Sat, 11 Dec 2021 09:25:59: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 09:26:14: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 09:26:34: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.10_peaks.xls INFO @ Sat, 11 Dec 2021 09:26:34: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.10_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 09:26:34: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.10_summits.bed INFO @ Sat, 11 Dec 2021 09:26:34: Done! pass1 - making usageList (14 chroms): 2 millis pass2 - checking and writing primary data (8022 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 09:26:41: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 09:27:01: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.20_peaks.xls INFO @ Sat, 11 Dec 2021 09:27:01: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.20_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 09:27:01: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9434488/SRX9434488.20_summits.bed INFO @ Sat, 11 Dec 2021 09:27:01: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (3693 records, 4 fields): 26 millis CompletedMACS2peakCalling