Job ID = 14170681 SRX = SRX9434483 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 31422134 spots for SRR12982881/SRR12982881.sra Written 31422134 spots for SRR12982881/SRR12982881.sra fastq に変換しました。 bowtie でマッピング中... Your job 14171239 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:35:44 31422134 reads; of these: 31422134 (100.00%) were paired; of these: 1350010 (4.30%) aligned concordantly 0 times 26087530 (83.02%) aligned concordantly exactly 1 time 3984594 (12.68%) aligned concordantly >1 times ---- 1350010 pairs aligned concordantly 0 times; of these: 154123 (11.42%) aligned discordantly 1 time ---- 1195887 pairs aligned 0 times concordantly or discordantly; of these: 2391774 mates make up the pairs; of these: 1297538 (54.25%) aligned 0 times 609890 (25.50%) aligned exactly 1 time 484346 (20.25%) aligned >1 times 97.94% overall alignment rate Time searching: 00:35:45 Overall time: 00:35:45 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 2553063 / 30200751 = 0.0845 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 08:49:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 08:49:44: #1 read tag files... INFO @ Sat, 11 Dec 2021 08:49:44: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 08:49:49: 1000000 INFO @ Sat, 11 Dec 2021 08:49:53: 2000000 INFO @ Sat, 11 Dec 2021 08:49:58: 3000000 INFO @ Sat, 11 Dec 2021 08:50:02: 4000000 INFO @ Sat, 11 Dec 2021 08:50:07: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 08:50:11: 6000000 INFO @ Sat, 11 Dec 2021 08:50:12: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 08:50:12: #1 read tag files... INFO @ Sat, 11 Dec 2021 08:50:12: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 08:50:16: 7000000 INFO @ Sat, 11 Dec 2021 08:50:17: 1000000 INFO @ Sat, 11 Dec 2021 08:50:21: 8000000 INFO @ Sat, 11 Dec 2021 08:50:22: 2000000 INFO @ Sat, 11 Dec 2021 08:50:26: 9000000 INFO @ Sat, 11 Dec 2021 08:50:27: 3000000 INFO @ Sat, 11 Dec 2021 08:50:31: 10000000 INFO @ Sat, 11 Dec 2021 08:50:32: 4000000 INFO @ Sat, 11 Dec 2021 08:50:36: 11000000 INFO @ Sat, 11 Dec 2021 08:50:37: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 08:50:41: 12000000 INFO @ Sat, 11 Dec 2021 08:50:42: 6000000 INFO @ Sat, 11 Dec 2021 08:50:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 08:50:42: #1 read tag files... INFO @ Sat, 11 Dec 2021 08:50:42: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 08:50:46: 13000000 INFO @ Sat, 11 Dec 2021 08:50:47: 7000000 INFO @ Sat, 11 Dec 2021 08:50:47: 1000000 INFO @ Sat, 11 Dec 2021 08:50:51: 14000000 INFO @ Sat, 11 Dec 2021 08:50:52: 8000000 INFO @ Sat, 11 Dec 2021 08:50:52: 2000000 INFO @ Sat, 11 Dec 2021 08:50:56: 15000000 INFO @ Sat, 11 Dec 2021 08:50:57: 9000000 INFO @ Sat, 11 Dec 2021 08:50:57: 3000000 INFO @ Sat, 11 Dec 2021 08:51:01: 16000000 INFO @ Sat, 11 Dec 2021 08:51:02: 10000000 INFO @ Sat, 11 Dec 2021 08:51:02: 4000000 INFO @ Sat, 11 Dec 2021 08:51:06: 17000000 INFO @ Sat, 11 Dec 2021 08:51:07: 11000000 INFO @ Sat, 11 Dec 2021 08:51:07: 5000000 INFO @ Sat, 11 Dec 2021 08:51:11: 18000000 INFO @ Sat, 11 Dec 2021 08:51:12: 12000000 INFO @ Sat, 11 Dec 2021 08:51:12: 6000000 INFO @ Sat, 11 Dec 2021 08:51:17: 19000000 INFO @ Sat, 11 Dec 2021 08:51:17: 13000000 INFO @ Sat, 11 Dec 2021 08:51:17: 7000000 INFO @ Sat, 11 Dec 2021 08:51:22: 20000000 INFO @ Sat, 11 Dec 2021 08:51:22: 14000000 INFO @ Sat, 11 Dec 2021 08:51:22: 8000000 INFO @ Sat, 11 Dec 2021 08:51:27: 21000000 INFO @ Sat, 11 Dec 2021 08:51:27: 15000000 INFO @ Sat, 11 Dec 2021 08:51:27: 9000000 INFO @ Sat, 11 Dec 2021 08:51:32: 22000000 INFO @ Sat, 11 Dec 2021 08:51:32: 10000000 INFO @ Sat, 11 Dec 2021 08:51:32: 16000000 INFO @ Sat, 11 Dec 2021 08:51:37: 23000000 INFO @ Sat, 11 Dec 2021 08:51:37: 11000000 INFO @ Sat, 11 Dec 2021 08:51:37: 17000000 INFO @ Sat, 11 Dec 2021 08:51:42: 24000000 INFO @ Sat, 11 Dec 2021 08:51:42: 12000000 INFO @ Sat, 11 Dec 2021 08:51:42: 18000000 INFO @ Sat, 11 Dec 2021 08:51:47: 25000000 INFO @ Sat, 11 Dec 2021 08:51:47: 13000000 INFO @ Sat, 11 Dec 2021 08:51:47: 19000000 INFO @ Sat, 11 Dec 2021 08:51:52: 26000000 INFO @ Sat, 11 Dec 2021 08:51:52: 14000000 INFO @ Sat, 11 Dec 2021 08:51:52: 20000000 INFO @ Sat, 11 Dec 2021 08:51:57: 27000000 INFO @ Sat, 11 Dec 2021 08:51:57: 15000000 INFO @ Sat, 11 Dec 2021 08:51:57: 21000000 INFO @ Sat, 11 Dec 2021 08:52:02: 28000000 INFO @ Sat, 11 Dec 2021 08:52:02: 16000000 INFO @ Sat, 11 Dec 2021 08:52:02: 22000000 INFO @ Sat, 11 Dec 2021 08:52:07: 17000000 INFO @ Sat, 11 Dec 2021 08:52:07: 29000000 INFO @ Sat, 11 Dec 2021 08:52:07: 23000000 INFO @ Sat, 11 Dec 2021 08:52:12: 18000000 INFO @ Sat, 11 Dec 2021 08:52:12: 30000000 INFO @ Sat, 11 Dec 2021 08:52:12: 24000000 INFO @ Sat, 11 Dec 2021 08:52:17: 19000000 INFO @ Sat, 11 Dec 2021 08:52:17: 25000000 INFO @ Sat, 11 Dec 2021 08:52:17: 31000000 INFO @ Sat, 11 Dec 2021 08:52:22: 20000000 INFO @ Sat, 11 Dec 2021 08:52:22: 26000000 INFO @ Sat, 11 Dec 2021 08:52:22: 32000000 INFO @ Sat, 11 Dec 2021 08:52:27: 21000000 INFO @ Sat, 11 Dec 2021 08:52:27: 27000000 INFO @ Sat, 11 Dec 2021 08:52:27: 33000000 INFO @ Sat, 11 Dec 2021 08:52:31: 22000000 INFO @ Sat, 11 Dec 2021 08:52:32: 28000000 INFO @ Sat, 11 Dec 2021 08:52:32: 34000000 INFO @ Sat, 11 Dec 2021 08:52:36: 23000000 INFO @ Sat, 11 Dec 2021 08:52:37: 29000000 INFO @ Sat, 11 Dec 2021 08:52:37: 35000000 INFO @ Sat, 11 Dec 2021 08:52:41: 24000000 INFO @ Sat, 11 Dec 2021 08:52:42: 30000000 INFO @ Sat, 11 Dec 2021 08:52:42: 36000000 INFO @ Sat, 11 Dec 2021 08:52:46: 25000000 INFO @ Sat, 11 Dec 2021 08:52:46: 31000000 INFO @ Sat, 11 Dec 2021 08:52:47: 37000000 INFO @ Sat, 11 Dec 2021 08:52:51: 26000000 INFO @ Sat, 11 Dec 2021 08:52:51: 32000000 INFO @ Sat, 11 Dec 2021 08:52:52: 38000000 INFO @ Sat, 11 Dec 2021 08:52:55: 27000000 INFO @ Sat, 11 Dec 2021 08:52:56: 33000000 INFO @ Sat, 11 Dec 2021 08:52:56: 39000000 INFO @ Sat, 11 Dec 2021 08:53:00: 28000000 INFO @ Sat, 11 Dec 2021 08:53:01: 34000000 INFO @ Sat, 11 Dec 2021 08:53:01: 40000000 INFO @ Sat, 11 Dec 2021 08:53:05: 29000000 INFO @ Sat, 11 Dec 2021 08:53:06: 35000000 INFO @ Sat, 11 Dec 2021 08:53:06: 41000000 INFO @ Sat, 11 Dec 2021 08:53:10: 30000000 INFO @ Sat, 11 Dec 2021 08:53:11: 36000000 INFO @ Sat, 11 Dec 2021 08:53:11: 42000000 INFO @ Sat, 11 Dec 2021 08:53:15: 31000000 INFO @ Sat, 11 Dec 2021 08:53:16: 37000000 INFO @ Sat, 11 Dec 2021 08:53:16: 43000000 INFO @ Sat, 11 Dec 2021 08:53:20: 32000000 INFO @ Sat, 11 Dec 2021 08:53:21: 38000000 INFO @ Sat, 11 Dec 2021 08:53:21: 44000000 INFO @ Sat, 11 Dec 2021 08:53:24: 33000000 INFO @ Sat, 11 Dec 2021 08:53:25: 39000000 INFO @ Sat, 11 Dec 2021 08:53:26: 45000000 INFO @ Sat, 11 Dec 2021 08:53:29: 34000000 INFO @ Sat, 11 Dec 2021 08:53:30: 40000000 INFO @ Sat, 11 Dec 2021 08:53:31: 46000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 11 Dec 2021 08:53:34: 35000000 INFO @ Sat, 11 Dec 2021 08:53:35: 41000000 INFO @ Sat, 11 Dec 2021 08:53:36: 47000000 INFO @ Sat, 11 Dec 2021 08:53:39: 36000000 INFO @ Sat, 11 Dec 2021 08:53:40: 42000000 INFO @ Sat, 11 Dec 2021 08:53:41: 48000000 INFO @ Sat, 11 Dec 2021 08:53:44: 37000000 INFO @ Sat, 11 Dec 2021 08:53:45: 43000000 INFO @ Sat, 11 Dec 2021 08:53:46: 49000000 INFO @ Sat, 11 Dec 2021 08:53:48: 38000000 INFO @ Sat, 11 Dec 2021 08:53:50: 44000000 INFO @ Sat, 11 Dec 2021 08:53:51: 50000000 INFO @ Sat, 11 Dec 2021 08:53:53: 39000000 INFO @ Sat, 11 Dec 2021 08:53:54: 45000000 INFO @ Sat, 11 Dec 2021 08:53:55: 51000000 INFO @ Sat, 11 Dec 2021 08:53:58: 40000000 INFO @ Sat, 11 Dec 2021 08:53:59: 46000000 INFO @ Sat, 11 Dec 2021 08:54:00: 52000000 INFO @ Sat, 11 Dec 2021 08:54:03: 41000000 INFO @ Sat, 11 Dec 2021 08:54:04: 47000000 INFO @ Sat, 11 Dec 2021 08:54:05: 53000000 INFO @ Sat, 11 Dec 2021 08:54:08: 42000000 INFO @ Sat, 11 Dec 2021 08:54:09: 48000000 INFO @ Sat, 11 Dec 2021 08:54:10: 54000000 INFO @ Sat, 11 Dec 2021 08:54:12: 43000000 INFO @ Sat, 11 Dec 2021 08:54:14: 49000000 INFO @ Sat, 11 Dec 2021 08:54:15: 55000000 INFO @ Sat, 11 Dec 2021 08:54:17: 44000000 BigWig に変換しました。 INFO @ Sat, 11 Dec 2021 08:54:19: 50000000 INFO @ Sat, 11 Dec 2021 08:54:20: 56000000 INFO @ Sat, 11 Dec 2021 08:54:22: 45000000 INFO @ Sat, 11 Dec 2021 08:54:22: #1 tag size is determined as 50 bps INFO @ Sat, 11 Dec 2021 08:54:22: #1 tag size = 50 INFO @ Sat, 11 Dec 2021 08:54:22: #1 total tags in treatment: 27531246 INFO @ Sat, 11 Dec 2021 08:54:22: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 08:54:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 08:54:23: #1 tags after filtering in treatment: 18529715 INFO @ Sat, 11 Dec 2021 08:54:23: #1 Redundant rate of treatment: 0.33 INFO @ Sat, 11 Dec 2021 08:54:23: #1 finished! INFO @ Sat, 11 Dec 2021 08:54:23: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 08:54:23: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 08:54:23: 51000000 INFO @ Sat, 11 Dec 2021 08:54:25: #2 number of paired peaks: 13913 INFO @ Sat, 11 Dec 2021 08:54:25: start model_add_line... INFO @ Sat, 11 Dec 2021 08:54:26: start X-correlation... INFO @ Sat, 11 Dec 2021 08:54:26: end of X-cor INFO @ Sat, 11 Dec 2021 08:54:26: #2 finished! INFO @ Sat, 11 Dec 2021 08:54:26: #2 predicted fragment length is 124 bps INFO @ Sat, 11 Dec 2021 08:54:26: #2 alternative fragment length(s) may be 124 bps INFO @ Sat, 11 Dec 2021 08:54:26: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.05_model.r INFO @ Sat, 11 Dec 2021 08:54:26: #3 Call peaks... INFO @ Sat, 11 Dec 2021 08:54:26: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 08:54:27: 46000000 INFO @ Sat, 11 Dec 2021 08:54:28: 52000000 INFO @ Sat, 11 Dec 2021 08:54:31: 47000000 INFO @ Sat, 11 Dec 2021 08:54:33: 53000000 INFO @ Sat, 11 Dec 2021 08:54:36: 48000000 INFO @ Sat, 11 Dec 2021 08:54:38: 54000000 INFO @ Sat, 11 Dec 2021 08:54:41: 49000000 INFO @ Sat, 11 Dec 2021 08:54:43: 55000000 INFO @ Sat, 11 Dec 2021 08:54:46: 50000000 INFO @ Sat, 11 Dec 2021 08:54:48: 56000000 INFO @ Sat, 11 Dec 2021 08:54:50: #1 tag size is determined as 50 bps INFO @ Sat, 11 Dec 2021 08:54:50: #1 tag size = 50 INFO @ Sat, 11 Dec 2021 08:54:50: #1 total tags in treatment: 27531246 INFO @ Sat, 11 Dec 2021 08:54:50: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 08:54:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 08:54:50: #1 tags after filtering in treatment: 18529715 INFO @ Sat, 11 Dec 2021 08:54:50: #1 Redundant rate of treatment: 0.33 INFO @ Sat, 11 Dec 2021 08:54:50: #1 finished! INFO @ Sat, 11 Dec 2021 08:54:50: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 08:54:50: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 08:54:51: 51000000 INFO @ Sat, 11 Dec 2021 08:54:53: #2 number of paired peaks: 13913 INFO @ Sat, 11 Dec 2021 08:54:53: start model_add_line... INFO @ Sat, 11 Dec 2021 08:54:53: start X-correlation... INFO @ Sat, 11 Dec 2021 08:54:53: end of X-cor INFO @ Sat, 11 Dec 2021 08:54:53: #2 finished! INFO @ Sat, 11 Dec 2021 08:54:53: #2 predicted fragment length is 124 bps INFO @ Sat, 11 Dec 2021 08:54:53: #2 alternative fragment length(s) may be 124 bps INFO @ Sat, 11 Dec 2021 08:54:53: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.10_model.r INFO @ Sat, 11 Dec 2021 08:54:53: #3 Call peaks... INFO @ Sat, 11 Dec 2021 08:54:53: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 08:54:55: 52000000 INFO @ Sat, 11 Dec 2021 08:55:00: 53000000 INFO @ Sat, 11 Dec 2021 08:55:04: 54000000 INFO @ Sat, 11 Dec 2021 08:55:08: 55000000 INFO @ Sat, 11 Dec 2021 08:55:10: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 08:55:13: 56000000 INFO @ Sat, 11 Dec 2021 08:55:15: #1 tag size is determined as 50 bps INFO @ Sat, 11 Dec 2021 08:55:15: #1 tag size = 50 INFO @ Sat, 11 Dec 2021 08:55:15: #1 total tags in treatment: 27531246 INFO @ Sat, 11 Dec 2021 08:55:15: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 08:55:15: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 08:55:16: #1 tags after filtering in treatment: 18529715 INFO @ Sat, 11 Dec 2021 08:55:16: #1 Redundant rate of treatment: 0.33 INFO @ Sat, 11 Dec 2021 08:55:16: #1 finished! INFO @ Sat, 11 Dec 2021 08:55:16: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 08:55:16: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 08:55:18: #2 number of paired peaks: 13913 INFO @ Sat, 11 Dec 2021 08:55:18: start model_add_line... INFO @ Sat, 11 Dec 2021 08:55:18: start X-correlation... INFO @ Sat, 11 Dec 2021 08:55:18: end of X-cor INFO @ Sat, 11 Dec 2021 08:55:18: #2 finished! INFO @ Sat, 11 Dec 2021 08:55:18: #2 predicted fragment length is 124 bps INFO @ Sat, 11 Dec 2021 08:55:18: #2 alternative fragment length(s) may be 124 bps INFO @ Sat, 11 Dec 2021 08:55:18: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.20_model.r INFO @ Sat, 11 Dec 2021 08:55:18: #3 Call peaks... INFO @ Sat, 11 Dec 2021 08:55:18: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 08:55:29: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.05_peaks.xls INFO @ Sat, 11 Dec 2021 08:55:30: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.05_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 08:55:30: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.05_summits.bed INFO @ Sat, 11 Dec 2021 08:55:30: Done! pass1 - making usageList (14 chroms): 3 millis pass2 - checking and writing primary data (13435 records, 4 fields): 19 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 08:55:37: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 08:55:56: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.10_peaks.xls INFO @ Sat, 11 Dec 2021 08:55:56: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.10_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 08:55:56: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.10_summits.bed INFO @ Sat, 11 Dec 2021 08:55:56: Done! pass1 - making usageList (14 chroms): 2 millis pass2 - checking and writing primary data (11191 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 08:56:01: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 08:56:20: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.20_peaks.xls INFO @ Sat, 11 Dec 2021 08:56:20: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.20_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 08:56:20: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9434483/SRX9434483.20_summits.bed INFO @ Sat, 11 Dec 2021 08:56:20: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (8405 records, 4 fields): 9 millis CompletedMACS2peakCalling