Job ID = 10166285 SRX = SRX9047376 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 51529595 spots for SRR12558904/SRR12558904.sra Written 51529595 spots for SRR12558904/SRR12558904.sra fastq に変換しました。 bowtie でマッピング中... Your job 10167351 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:29:48 51529595 reads; of these: 51529595 (100.00%) were paired; of these: 7233535 (14.04%) aligned concordantly 0 times 33028530 (64.10%) aligned concordantly exactly 1 time 11267530 (21.87%) aligned concordantly >1 times ---- 7233535 pairs aligned concordantly 0 times; of these: 2807272 (38.81%) aligned discordantly 1 time ---- 4426263 pairs aligned 0 times concordantly or discordantly; of these: 8852526 mates make up the pairs; of these: 3988661 (45.06%) aligned 0 times 2040528 (23.05%) aligned exactly 1 time 2823337 (31.89%) aligned >1 times 96.13% overall alignment rate Time searching: 01:29:48 Overall time: 01:29:48 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 40 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 5576685 / 47040260 = 0.1186 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 08 Oct 2020 22:38:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 08 Oct 2020 22:38:47: #1 read tag files... INFO @ Thu, 08 Oct 2020 22:38:47: #1 read treatment tags... INFO @ Thu, 08 Oct 2020 22:38:52: 1000000 INFO @ Thu, 08 Oct 2020 22:38:56: 2000000 INFO @ Thu, 08 Oct 2020 22:39:00: 3000000 INFO @ Thu, 08 Oct 2020 22:39:04: 4000000 INFO @ Thu, 08 Oct 2020 22:39:09: 5000000 INFO @ Thu, 08 Oct 2020 22:39:13: 6000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 08 Oct 2020 22:39:17: 7000000 INFO @ Thu, 08 Oct 2020 22:39:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 08 Oct 2020 22:39:17: #1 read tag files... INFO @ Thu, 08 Oct 2020 22:39:17: #1 read treatment tags... INFO @ Thu, 08 Oct 2020 22:39:21: 8000000 INFO @ Thu, 08 Oct 2020 22:39:22: 1000000 INFO @ Thu, 08 Oct 2020 22:39:26: 9000000 INFO @ Thu, 08 Oct 2020 22:39:26: 2000000 INFO @ Thu, 08 Oct 2020 22:39:30: 10000000 INFO @ Thu, 08 Oct 2020 22:39:31: 3000000 INFO @ Thu, 08 Oct 2020 22:39:35: 11000000 INFO @ Thu, 08 Oct 2020 22:39:35: 4000000 INFO @ Thu, 08 Oct 2020 22:39:39: 12000000 INFO @ Thu, 08 Oct 2020 22:39:39: 5000000 INFO @ Thu, 08 Oct 2020 22:39:44: 13000000 INFO @ Thu, 08 Oct 2020 22:39:44: 6000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 08 Oct 2020 22:39:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 08 Oct 2020 22:39:47: #1 read tag files... INFO @ Thu, 08 Oct 2020 22:39:47: #1 read treatment tags... INFO @ Thu, 08 Oct 2020 22:39:48: 14000000 INFO @ Thu, 08 Oct 2020 22:39:48: 7000000 INFO @ Thu, 08 Oct 2020 22:39:52: 1000000 INFO @ Thu, 08 Oct 2020 22:39:52: 15000000 INFO @ Thu, 08 Oct 2020 22:39:53: 8000000 INFO @ Thu, 08 Oct 2020 22:39:56: 2000000 INFO @ Thu, 08 Oct 2020 22:39:57: 16000000 INFO @ Thu, 08 Oct 2020 22:39:58: 9000000 INFO @ Thu, 08 Oct 2020 22:40:00: 3000000 INFO @ Thu, 08 Oct 2020 22:40:01: 17000000 INFO @ Thu, 08 Oct 2020 22:40:02: 10000000 INFO @ Thu, 08 Oct 2020 22:40:05: 4000000 INFO @ Thu, 08 Oct 2020 22:40:06: 18000000 INFO @ Thu, 08 Oct 2020 22:40:07: 11000000 INFO @ Thu, 08 Oct 2020 22:40:09: 5000000 INFO @ Thu, 08 Oct 2020 22:40:10: 19000000 INFO @ Thu, 08 Oct 2020 22:40:11: 12000000 INFO @ Thu, 08 Oct 2020 22:40:14: 6000000 INFO @ Thu, 08 Oct 2020 22:40:15: 20000000 INFO @ Thu, 08 Oct 2020 22:40:16: 13000000 INFO @ Thu, 08 Oct 2020 22:40:18: 7000000 INFO @ Thu, 08 Oct 2020 22:40:19: 21000000 INFO @ Thu, 08 Oct 2020 22:40:20: 14000000 INFO @ Thu, 08 Oct 2020 22:40:23: 8000000 INFO @ Thu, 08 Oct 2020 22:40:24: 22000000 INFO @ Thu, 08 Oct 2020 22:40:25: 15000000 INFO @ Thu, 08 Oct 2020 22:40:27: 9000000 INFO @ Thu, 08 Oct 2020 22:40:28: 23000000 INFO @ Thu, 08 Oct 2020 22:40:29: 16000000 INFO @ Thu, 08 Oct 2020 22:40:32: 10000000 INFO @ Thu, 08 Oct 2020 22:40:33: 24000000 INFO @ Thu, 08 Oct 2020 22:40:34: 17000000 INFO @ Thu, 08 Oct 2020 22:40:36: 11000000 INFO @ Thu, 08 Oct 2020 22:40:37: 25000000 INFO @ Thu, 08 Oct 2020 22:40:39: 18000000 INFO @ Thu, 08 Oct 2020 22:40:40: 12000000 INFO @ Thu, 08 Oct 2020 22:40:42: 26000000 INFO @ Thu, 08 Oct 2020 22:40:43: 19000000 INFO @ Thu, 08 Oct 2020 22:40:45: 13000000 INFO @ Thu, 08 Oct 2020 22:40:46: 27000000 INFO @ Thu, 08 Oct 2020 22:40:47: 20000000 INFO @ Thu, 08 Oct 2020 22:40:49: 14000000 INFO @ Thu, 08 Oct 2020 22:40:51: 28000000 INFO @ Thu, 08 Oct 2020 22:40:52: 21000000 INFO @ Thu, 08 Oct 2020 22:40:54: 15000000 INFO @ Thu, 08 Oct 2020 22:40:55: 29000000 INFO @ Thu, 08 Oct 2020 22:40:56: 22000000 INFO @ Thu, 08 Oct 2020 22:40:58: 16000000 INFO @ Thu, 08 Oct 2020 22:40:59: 30000000 INFO @ Thu, 08 Oct 2020 22:41:01: 23000000 INFO @ Thu, 08 Oct 2020 22:41:02: 17000000 INFO @ Thu, 08 Oct 2020 22:41:04: 31000000 INFO @ Thu, 08 Oct 2020 22:41:05: 24000000 INFO @ Thu, 08 Oct 2020 22:41:07: 18000000 INFO @ Thu, 08 Oct 2020 22:41:08: 32000000 INFO @ Thu, 08 Oct 2020 22:41:10: 25000000 INFO @ Thu, 08 Oct 2020 22:41:11: 19000000 INFO @ Thu, 08 Oct 2020 22:41:13: 33000000 INFO @ Thu, 08 Oct 2020 22:41:14: 26000000 INFO @ Thu, 08 Oct 2020 22:41:16: 20000000 INFO @ Thu, 08 Oct 2020 22:41:17: 34000000 INFO @ Thu, 08 Oct 2020 22:41:19: 27000000 INFO @ Thu, 08 Oct 2020 22:41:20: 21000000 INFO @ Thu, 08 Oct 2020 22:41:21: 35000000 INFO @ Thu, 08 Oct 2020 22:41:23: 28000000 INFO @ Thu, 08 Oct 2020 22:41:24: 22000000 INFO @ Thu, 08 Oct 2020 22:41:26: 36000000 INFO @ Thu, 08 Oct 2020 22:41:28: 29000000 INFO @ Thu, 08 Oct 2020 22:41:29: 23000000 INFO @ Thu, 08 Oct 2020 22:41:30: 37000000 INFO @ Thu, 08 Oct 2020 22:41:32: 30000000 INFO @ Thu, 08 Oct 2020 22:41:33: 24000000 INFO @ Thu, 08 Oct 2020 22:41:35: 38000000 INFO @ Thu, 08 Oct 2020 22:41:37: 31000000 INFO @ Thu, 08 Oct 2020 22:41:37: 25000000 INFO @ Thu, 08 Oct 2020 22:41:39: 39000000 INFO @ Thu, 08 Oct 2020 22:41:41: 32000000 INFO @ Thu, 08 Oct 2020 22:41:42: 26000000 INFO @ Thu, 08 Oct 2020 22:41:44: 40000000 INFO @ Thu, 08 Oct 2020 22:41:45: 33000000 INFO @ Thu, 08 Oct 2020 22:41:46: 27000000 INFO @ Thu, 08 Oct 2020 22:41:48: 41000000 INFO @ Thu, 08 Oct 2020 22:41:50: 34000000 INFO @ Thu, 08 Oct 2020 22:41:51: 28000000 INFO @ Thu, 08 Oct 2020 22:41:52: 42000000 INFO @ Thu, 08 Oct 2020 22:41:54: 35000000 INFO @ Thu, 08 Oct 2020 22:41:55: 29000000 INFO @ Thu, 08 Oct 2020 22:41:57: 43000000 INFO @ Thu, 08 Oct 2020 22:41:59: 36000000 INFO @ Thu, 08 Oct 2020 22:41:59: 30000000 INFO @ Thu, 08 Oct 2020 22:42:01: 44000000 INFO @ Thu, 08 Oct 2020 22:42:03: 37000000 INFO @ Thu, 08 Oct 2020 22:42:04: 31000000 INFO @ Thu, 08 Oct 2020 22:42:06: 45000000 INFO @ Thu, 08 Oct 2020 22:42:07: 38000000 INFO @ Thu, 08 Oct 2020 22:42:08: 32000000 INFO @ Thu, 08 Oct 2020 22:42:10: 46000000 INFO @ Thu, 08 Oct 2020 22:42:12: 39000000 INFO @ Thu, 08 Oct 2020 22:42:12: 33000000 INFO @ Thu, 08 Oct 2020 22:42:14: 47000000 INFO @ Thu, 08 Oct 2020 22:42:16: 40000000 INFO @ Thu, 08 Oct 2020 22:42:17: 34000000 INFO @ Thu, 08 Oct 2020 22:42:18: 48000000 INFO @ Thu, 08 Oct 2020 22:42:20: 41000000 INFO @ Thu, 08 Oct 2020 22:42:21: 35000000 INFO @ Thu, 08 Oct 2020 22:42:23: 49000000 INFO @ Thu, 08 Oct 2020 22:42:25: 42000000 INFO @ Thu, 08 Oct 2020 22:42:25: 36000000 INFO @ Thu, 08 Oct 2020 22:42:27: 50000000 INFO @ Thu, 08 Oct 2020 22:42:29: 43000000 INFO @ Thu, 08 Oct 2020 22:42:30: 37000000 INFO @ Thu, 08 Oct 2020 22:42:32: 51000000 INFO @ Thu, 08 Oct 2020 22:42:34: 44000000 INFO @ Thu, 08 Oct 2020 22:42:34: 38000000 INFO @ Thu, 08 Oct 2020 22:42:36: 52000000 INFO @ Thu, 08 Oct 2020 22:42:38: 45000000 INFO @ Thu, 08 Oct 2020 22:42:38: 39000000 INFO @ Thu, 08 Oct 2020 22:42:40: 53000000 INFO @ Thu, 08 Oct 2020 22:42:42: 46000000 INFO @ Thu, 08 Oct 2020 22:42:43: 40000000 INFO @ Thu, 08 Oct 2020 22:42:44: 54000000 INFO @ Thu, 08 Oct 2020 22:42:47: 47000000 INFO @ Thu, 08 Oct 2020 22:42:47: 41000000 INFO @ Thu, 08 Oct 2020 22:42:49: 55000000 INFO @ Thu, 08 Oct 2020 22:42:51: 48000000 INFO @ Thu, 08 Oct 2020 22:42:51: 42000000 INFO @ Thu, 08 Oct 2020 22:42:53: 56000000 INFO @ Thu, 08 Oct 2020 22:42:55: 49000000 INFO @ Thu, 08 Oct 2020 22:42:56: 43000000 INFO @ Thu, 08 Oct 2020 22:42:57: 57000000 INFO @ Thu, 08 Oct 2020 22:43:00: 50000000 INFO @ Thu, 08 Oct 2020 22:43:00: 44000000 INFO @ Thu, 08 Oct 2020 22:43:02: 58000000 INFO @ Thu, 08 Oct 2020 22:43:04: 51000000 INFO @ Thu, 08 Oct 2020 22:43:04: 45000000 INFO @ Thu, 08 Oct 2020 22:43:07: 59000000 INFO @ Thu, 08 Oct 2020 22:43:08: 52000000 INFO @ Thu, 08 Oct 2020 22:43:09: 46000000 INFO @ Thu, 08 Oct 2020 22:43:11: 60000000 INFO @ Thu, 08 Oct 2020 22:43:13: 53000000 INFO @ Thu, 08 Oct 2020 22:43:13: 47000000 INFO @ Thu, 08 Oct 2020 22:43:16: 61000000 INFO @ Thu, 08 Oct 2020 22:43:17: 54000000 INFO @ Thu, 08 Oct 2020 22:43:17: 48000000 INFO @ Thu, 08 Oct 2020 22:43:20: 62000000 INFO @ Thu, 08 Oct 2020 22:43:21: 55000000 INFO @ Thu, 08 Oct 2020 22:43:21: 49000000 INFO @ Thu, 08 Oct 2020 22:43:24: 63000000 INFO @ Thu, 08 Oct 2020 22:43:26: 56000000 INFO @ Thu, 08 Oct 2020 22:43:26: 50000000 INFO @ Thu, 08 Oct 2020 22:43:29: 64000000 INFO @ Thu, 08 Oct 2020 22:43:30: 57000000 INFO @ Thu, 08 Oct 2020 22:43:30: 51000000 INFO @ Thu, 08 Oct 2020 22:43:33: 65000000 INFO @ Thu, 08 Oct 2020 22:43:34: 52000000 INFO @ Thu, 08 Oct 2020 22:43:35: 58000000 INFO @ Thu, 08 Oct 2020 22:43:38: 66000000 INFO @ Thu, 08 Oct 2020 22:43:39: 53000000 INFO @ Thu, 08 Oct 2020 22:43:39: 59000000 INFO @ Thu, 08 Oct 2020 22:43:42: 67000000 INFO @ Thu, 08 Oct 2020 22:43:43: 54000000 INFO @ Thu, 08 Oct 2020 22:43:43: 60000000 INFO @ Thu, 08 Oct 2020 22:43:47: 68000000 INFO @ Thu, 08 Oct 2020 22:43:47: 55000000 INFO @ Thu, 08 Oct 2020 22:43:48: 61000000 INFO @ Thu, 08 Oct 2020 22:43:51: 69000000 INFO @ Thu, 08 Oct 2020 22:43:51: 56000000 INFO @ Thu, 08 Oct 2020 22:43:52: 62000000 INFO @ Thu, 08 Oct 2020 22:43:56: 70000000 INFO @ Thu, 08 Oct 2020 22:43:56: 57000000 INFO @ Thu, 08 Oct 2020 22:43:57: 63000000 INFO @ Thu, 08 Oct 2020 22:44:00: 71000000 INFO @ Thu, 08 Oct 2020 22:44:00: 58000000 INFO @ Thu, 08 Oct 2020 22:44:01: 64000000 INFO @ Thu, 08 Oct 2020 22:44:05: 72000000 INFO @ Thu, 08 Oct 2020 22:44:05: 59000000 INFO @ Thu, 08 Oct 2020 22:44:06: 65000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Thu, 08 Oct 2020 22:44:09: 73000000 INFO @ Thu, 08 Oct 2020 22:44:09: 60000000 INFO @ Thu, 08 Oct 2020 22:44:10: 66000000 INFO @ Thu, 08 Oct 2020 22:44:14: 74000000 INFO @ Thu, 08 Oct 2020 22:44:14: 61000000 INFO @ Thu, 08 Oct 2020 22:44:15: 67000000 INFO @ Thu, 08 Oct 2020 22:44:18: 75000000 INFO @ Thu, 08 Oct 2020 22:44:18: 62000000 INFO @ Thu, 08 Oct 2020 22:44:19: 68000000 INFO @ Thu, 08 Oct 2020 22:44:23: 76000000 INFO @ Thu, 08 Oct 2020 22:44:23: 63000000 INFO @ Thu, 08 Oct 2020 22:44:24: 69000000 INFO @ Thu, 08 Oct 2020 22:44:27: 77000000 INFO @ Thu, 08 Oct 2020 22:44:27: 64000000 INFO @ Thu, 08 Oct 2020 22:44:29: 70000000 INFO @ Thu, 08 Oct 2020 22:44:32: 78000000 INFO @ Thu, 08 Oct 2020 22:44:32: 65000000 INFO @ Thu, 08 Oct 2020 22:44:33: 71000000 INFO @ Thu, 08 Oct 2020 22:44:36: 79000000 INFO @ Thu, 08 Oct 2020 22:44:36: 66000000 INFO @ Thu, 08 Oct 2020 22:44:38: 72000000 INFO @ Thu, 08 Oct 2020 22:44:41: 80000000 INFO @ Thu, 08 Oct 2020 22:44:41: 67000000 INFO @ Thu, 08 Oct 2020 22:44:42: 73000000 INFO @ Thu, 08 Oct 2020 22:44:45: 81000000 INFO @ Thu, 08 Oct 2020 22:44:45: 68000000 INFO @ Thu, 08 Oct 2020 22:44:47: 74000000 INFO @ Thu, 08 Oct 2020 22:44:50: 82000000 INFO @ Thu, 08 Oct 2020 22:44:50: 69000000 INFO @ Thu, 08 Oct 2020 22:44:51: 75000000 INFO @ Thu, 08 Oct 2020 22:44:54: 83000000 INFO @ Thu, 08 Oct 2020 22:44:54: 70000000 INFO @ Thu, 08 Oct 2020 22:44:56: 76000000 INFO @ Thu, 08 Oct 2020 22:44:58: 84000000 INFO @ Thu, 08 Oct 2020 22:44:59: 71000000 INFO @ Thu, 08 Oct 2020 22:45:00: 77000000 INFO @ Thu, 08 Oct 2020 22:45:03: 85000000 INFO @ Thu, 08 Oct 2020 22:45:03: 72000000 INFO @ Thu, 08 Oct 2020 22:45:05: 78000000 INFO @ Thu, 08 Oct 2020 22:45:07: 86000000 INFO @ Thu, 08 Oct 2020 22:45:08: 73000000 INFO @ Thu, 08 Oct 2020 22:45:09: 79000000 INFO @ Thu, 08 Oct 2020 22:45:12: 87000000 INFO @ Thu, 08 Oct 2020 22:45:12: 74000000 INFO @ Thu, 08 Oct 2020 22:45:13: 80000000 INFO @ Thu, 08 Oct 2020 22:45:16: #1 tag size is determined as 42 bps INFO @ Thu, 08 Oct 2020 22:45:16: #1 tag size = 42 INFO @ Thu, 08 Oct 2020 22:45:16: #1 total tags in treatment: 38849937 INFO @ Thu, 08 Oct 2020 22:45:16: #1 user defined the maximum tags... INFO @ Thu, 08 Oct 2020 22:45:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 08 Oct 2020 22:45:16: 75000000 INFO @ Thu, 08 Oct 2020 22:45:17: #1 tags after filtering in treatment: 19891324 INFO @ Thu, 08 Oct 2020 22:45:17: #1 Redundant rate of treatment: 0.49 INFO @ Thu, 08 Oct 2020 22:45:17: #1 finished! INFO @ Thu, 08 Oct 2020 22:45:17: #2 Build Peak Model... INFO @ Thu, 08 Oct 2020 22:45:17: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 08 Oct 2020 22:45:18: 81000000 INFO @ Thu, 08 Oct 2020 22:45:19: #2 number of paired peaks: 5084 INFO @ Thu, 08 Oct 2020 22:45:19: start model_add_line... INFO @ Thu, 08 Oct 2020 22:45:19: start X-correlation... INFO @ Thu, 08 Oct 2020 22:45:19: end of X-cor INFO @ Thu, 08 Oct 2020 22:45:19: #2 finished! INFO @ Thu, 08 Oct 2020 22:45:19: #2 predicted fragment length is 289 bps INFO @ Thu, 08 Oct 2020 22:45:19: #2 alternative fragment length(s) may be 289 bps INFO @ Thu, 08 Oct 2020 22:45:19: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.05_model.r INFO @ Thu, 08 Oct 2020 22:45:19: #3 Call peaks... INFO @ Thu, 08 Oct 2020 22:45:19: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 08 Oct 2020 22:45:21: 76000000 BigWig に変換しました。 INFO @ Thu, 08 Oct 2020 22:45:22: 82000000 INFO @ Thu, 08 Oct 2020 22:45:25: 77000000 INFO @ Thu, 08 Oct 2020 22:45:26: 83000000 INFO @ Thu, 08 Oct 2020 22:45:30: 78000000 INFO @ Thu, 08 Oct 2020 22:45:31: 84000000 INFO @ Thu, 08 Oct 2020 22:45:34: 79000000 INFO @ Thu, 08 Oct 2020 22:45:35: 85000000 INFO @ Thu, 08 Oct 2020 22:45:38: 80000000 INFO @ Thu, 08 Oct 2020 22:45:40: 86000000 INFO @ Thu, 08 Oct 2020 22:45:43: 81000000 INFO @ Thu, 08 Oct 2020 22:45:44: 87000000 INFO @ Thu, 08 Oct 2020 22:45:47: 82000000 INFO @ Thu, 08 Oct 2020 22:45:49: #1 tag size is determined as 42 bps INFO @ Thu, 08 Oct 2020 22:45:49: #1 tag size = 42 INFO @ Thu, 08 Oct 2020 22:45:49: #1 total tags in treatment: 38849937 INFO @ Thu, 08 Oct 2020 22:45:49: #1 user defined the maximum tags... INFO @ Thu, 08 Oct 2020 22:45:49: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 08 Oct 2020 22:45:49: #1 tags after filtering in treatment: 19891324 INFO @ Thu, 08 Oct 2020 22:45:49: #1 Redundant rate of treatment: 0.49 INFO @ Thu, 08 Oct 2020 22:45:49: #1 finished! INFO @ Thu, 08 Oct 2020 22:45:49: #2 Build Peak Model... INFO @ Thu, 08 Oct 2020 22:45:49: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 08 Oct 2020 22:45:51: #2 number of paired peaks: 5084 INFO @ Thu, 08 Oct 2020 22:45:51: start model_add_line... INFO @ Thu, 08 Oct 2020 22:45:51: start X-correlation... INFO @ Thu, 08 Oct 2020 22:45:51: end of X-cor INFO @ Thu, 08 Oct 2020 22:45:51: #2 finished! INFO @ Thu, 08 Oct 2020 22:45:51: #2 predicted fragment length is 289 bps INFO @ Thu, 08 Oct 2020 22:45:51: #2 alternative fragment length(s) may be 289 bps INFO @ Thu, 08 Oct 2020 22:45:51: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.10_model.r INFO @ Thu, 08 Oct 2020 22:45:51: #3 Call peaks... INFO @ Thu, 08 Oct 2020 22:45:51: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 08 Oct 2020 22:45:51: 83000000 INFO @ Thu, 08 Oct 2020 22:45:55: 84000000 INFO @ Thu, 08 Oct 2020 22:46:00: 85000000 INFO @ Thu, 08 Oct 2020 22:46:04: 86000000 INFO @ Thu, 08 Oct 2020 22:46:08: 87000000 INFO @ Thu, 08 Oct 2020 22:46:12: #1 tag size is determined as 42 bps INFO @ Thu, 08 Oct 2020 22:46:12: #1 tag size = 42 INFO @ Thu, 08 Oct 2020 22:46:12: #1 total tags in treatment: 38849937 INFO @ Thu, 08 Oct 2020 22:46:12: #1 user defined the maximum tags... INFO @ Thu, 08 Oct 2020 22:46:12: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 08 Oct 2020 22:46:13: #1 tags after filtering in treatment: 19891324 INFO @ Thu, 08 Oct 2020 22:46:13: #1 Redundant rate of treatment: 0.49 INFO @ Thu, 08 Oct 2020 22:46:13: #1 finished! INFO @ Thu, 08 Oct 2020 22:46:13: #2 Build Peak Model... INFO @ Thu, 08 Oct 2020 22:46:13: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 08 Oct 2020 22:46:15: #2 number of paired peaks: 5084 INFO @ Thu, 08 Oct 2020 22:46:15: start model_add_line... INFO @ Thu, 08 Oct 2020 22:46:15: start X-correlation... INFO @ Thu, 08 Oct 2020 22:46:15: end of X-cor INFO @ Thu, 08 Oct 2020 22:46:15: #2 finished! INFO @ Thu, 08 Oct 2020 22:46:15: #2 predicted fragment length is 289 bps INFO @ Thu, 08 Oct 2020 22:46:15: #2 alternative fragment length(s) may be 289 bps INFO @ Thu, 08 Oct 2020 22:46:15: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.20_model.r INFO @ Thu, 08 Oct 2020 22:46:15: #3 Call peaks... INFO @ Thu, 08 Oct 2020 22:46:15: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 08 Oct 2020 22:46:21: #3 Call peaks for each chromosome... INFO @ Thu, 08 Oct 2020 22:46:43: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.05_peaks.xls INFO @ Thu, 08 Oct 2020 22:46:43: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.05_peaks.narrowPeak INFO @ Thu, 08 Oct 2020 22:46:43: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.05_summits.bed INFO @ Thu, 08 Oct 2020 22:46:43: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (10430 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Thu, 08 Oct 2020 22:46:55: #3 Call peaks for each chromosome... INFO @ Thu, 08 Oct 2020 22:47:16: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.10_peaks.xls INFO @ Thu, 08 Oct 2020 22:47:16: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.10_peaks.narrowPeak INFO @ Thu, 08 Oct 2020 22:47:16: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.10_summits.bed INFO @ Thu, 08 Oct 2020 22:47:16: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (8057 records, 4 fields): 9 millis CompletedMACS2peakCalling INFO @ Thu, 08 Oct 2020 22:47:18: #3 Call peaks for each chromosome... INFO @ Thu, 08 Oct 2020 22:47:40: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.20_peaks.xls INFO @ Thu, 08 Oct 2020 22:47:40: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.20_peaks.narrowPeak INFO @ Thu, 08 Oct 2020 22:47:40: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9047376/SRX9047376.20_summits.bed INFO @ Thu, 08 Oct 2020 22:47:40: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (5962 records, 4 fields): 7 millis CompletedMACS2peakCalling