Job ID = 10166271 SRX = SRX9047372 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 36206329 spots for SRR12558900/SRR12558900.sra Written 36206329 spots for SRR12558900/SRR12558900.sra fastq に変換しました。 bowtie でマッピング中... Your job 10167061 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:52:16 36206329 reads; of these: 36206329 (100.00%) were paired; of these: 4976717 (13.75%) aligned concordantly 0 times 24357336 (67.27%) aligned concordantly exactly 1 time 6872276 (18.98%) aligned concordantly >1 times ---- 4976717 pairs aligned concordantly 0 times; of these: 1080687 (21.71%) aligned discordantly 1 time ---- 3896030 pairs aligned 0 times concordantly or discordantly; of these: 7792060 mates make up the pairs; of these: 5259389 (67.50%) aligned 0 times 1269029 (16.29%) aligned exactly 1 time 1263642 (16.22%) aligned >1 times 92.74% overall alignment rate Time searching: 00:52:16 Overall time: 00:52:16 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 5641591 / 32266329 = 0.1748 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 08 Oct 2020 21:54:04: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 08 Oct 2020 21:54:04: #1 read tag files... INFO @ Thu, 08 Oct 2020 21:54:04: #1 read treatment tags... INFO @ Thu, 08 Oct 2020 21:54:09: 1000000 INFO @ Thu, 08 Oct 2020 21:54:14: 2000000 INFO @ Thu, 08 Oct 2020 21:54:18: 3000000 INFO @ Thu, 08 Oct 2020 21:54:23: 4000000 INFO @ Thu, 08 Oct 2020 21:54:28: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 08 Oct 2020 21:54:32: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 08 Oct 2020 21:54:32: #1 read tag files... INFO @ Thu, 08 Oct 2020 21:54:32: #1 read treatment tags... INFO @ Thu, 08 Oct 2020 21:54:33: 6000000 INFO @ Thu, 08 Oct 2020 21:54:38: 1000000 INFO @ Thu, 08 Oct 2020 21:54:38: 7000000 INFO @ Thu, 08 Oct 2020 21:54:43: 2000000 INFO @ Thu, 08 Oct 2020 21:54:44: 8000000 INFO @ Thu, 08 Oct 2020 21:54:48: 3000000 INFO @ Thu, 08 Oct 2020 21:54:49: 9000000 INFO @ Thu, 08 Oct 2020 21:54:54: 4000000 INFO @ Thu, 08 Oct 2020 21:54:55: 10000000 INFO @ Thu, 08 Oct 2020 21:54:59: 5000000 INFO @ Thu, 08 Oct 2020 21:55:00: 11000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 08 Oct 2020 21:55:02: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 08 Oct 2020 21:55:02: #1 read tag files... INFO @ Thu, 08 Oct 2020 21:55:02: #1 read treatment tags... INFO @ Thu, 08 Oct 2020 21:55:04: 6000000 INFO @ Thu, 08 Oct 2020 21:55:05: 12000000 INFO @ Thu, 08 Oct 2020 21:55:08: 1000000 INFO @ Thu, 08 Oct 2020 21:55:10: 7000000 INFO @ Thu, 08 Oct 2020 21:55:11: 13000000 INFO @ Thu, 08 Oct 2020 21:55:13: 2000000 INFO @ Thu, 08 Oct 2020 21:55:15: 8000000 INFO @ Thu, 08 Oct 2020 21:55:16: 14000000 INFO @ Thu, 08 Oct 2020 21:55:19: 3000000 INFO @ Thu, 08 Oct 2020 21:55:20: 9000000 INFO @ Thu, 08 Oct 2020 21:55:21: 15000000 INFO @ Thu, 08 Oct 2020 21:55:24: 4000000 INFO @ Thu, 08 Oct 2020 21:55:26: 10000000 INFO @ Thu, 08 Oct 2020 21:55:27: 16000000 INFO @ Thu, 08 Oct 2020 21:55:29: 5000000 INFO @ Thu, 08 Oct 2020 21:55:31: 11000000 INFO @ Thu, 08 Oct 2020 21:55:32: 17000000 INFO @ Thu, 08 Oct 2020 21:55:35: 6000000 INFO @ Thu, 08 Oct 2020 21:55:36: 12000000 INFO @ Thu, 08 Oct 2020 21:55:37: 18000000 INFO @ Thu, 08 Oct 2020 21:55:40: 7000000 INFO @ Thu, 08 Oct 2020 21:55:42: 13000000 INFO @ Thu, 08 Oct 2020 21:55:43: 19000000 INFO @ Thu, 08 Oct 2020 21:55:45: 8000000 INFO @ Thu, 08 Oct 2020 21:55:47: 14000000 INFO @ Thu, 08 Oct 2020 21:55:48: 20000000 INFO @ Thu, 08 Oct 2020 21:55:51: 9000000 INFO @ Thu, 08 Oct 2020 21:55:52: 15000000 INFO @ Thu, 08 Oct 2020 21:55:53: 21000000 INFO @ Thu, 08 Oct 2020 21:55:56: 10000000 INFO @ Thu, 08 Oct 2020 21:55:58: 16000000 INFO @ Thu, 08 Oct 2020 21:55:58: 22000000 INFO @ Thu, 08 Oct 2020 21:56:01: 11000000 INFO @ Thu, 08 Oct 2020 21:56:03: 17000000 INFO @ Thu, 08 Oct 2020 21:56:04: 23000000 INFO @ Thu, 08 Oct 2020 21:56:07: 12000000 INFO @ Thu, 08 Oct 2020 21:56:08: 18000000 INFO @ Thu, 08 Oct 2020 21:56:09: 24000000 INFO @ Thu, 08 Oct 2020 21:56:12: 13000000 INFO @ Thu, 08 Oct 2020 21:56:13: 19000000 INFO @ Thu, 08 Oct 2020 21:56:14: 25000000 INFO @ Thu, 08 Oct 2020 21:56:17: 14000000 INFO @ Thu, 08 Oct 2020 21:56:19: 20000000 INFO @ Thu, 08 Oct 2020 21:56:20: 26000000 INFO @ Thu, 08 Oct 2020 21:56:23: 15000000 INFO @ Thu, 08 Oct 2020 21:56:24: 21000000 INFO @ Thu, 08 Oct 2020 21:56:25: 27000000 INFO @ Thu, 08 Oct 2020 21:56:28: 16000000 INFO @ Thu, 08 Oct 2020 21:56:29: 22000000 INFO @ Thu, 08 Oct 2020 21:56:30: 28000000 INFO @ Thu, 08 Oct 2020 21:56:33: 17000000 INFO @ Thu, 08 Oct 2020 21:56:34: 23000000 INFO @ Thu, 08 Oct 2020 21:56:36: 29000000 INFO @ Thu, 08 Oct 2020 21:56:39: 18000000 INFO @ Thu, 08 Oct 2020 21:56:40: 24000000 INFO @ Thu, 08 Oct 2020 21:56:41: 30000000 INFO @ Thu, 08 Oct 2020 21:56:44: 19000000 INFO @ Thu, 08 Oct 2020 21:56:45: 25000000 INFO @ Thu, 08 Oct 2020 21:56:46: 31000000 INFO @ Thu, 08 Oct 2020 21:56:49: 20000000 INFO @ Thu, 08 Oct 2020 21:56:50: 26000000 INFO @ Thu, 08 Oct 2020 21:56:51: 32000000 INFO @ Thu, 08 Oct 2020 21:56:54: 21000000 INFO @ Thu, 08 Oct 2020 21:56:55: 27000000 INFO @ Thu, 08 Oct 2020 21:56:56: 33000000 INFO @ Thu, 08 Oct 2020 21:57:00: 22000000 INFO @ Thu, 08 Oct 2020 21:57:00: 28000000 INFO @ Thu, 08 Oct 2020 21:57:02: 34000000 INFO @ Thu, 08 Oct 2020 21:57:05: 23000000 INFO @ Thu, 08 Oct 2020 21:57:06: 29000000 INFO @ Thu, 08 Oct 2020 21:57:07: 35000000 INFO @ Thu, 08 Oct 2020 21:57:10: 24000000 INFO @ Thu, 08 Oct 2020 21:57:11: 30000000 INFO @ Thu, 08 Oct 2020 21:57:12: 36000000 INFO @ Thu, 08 Oct 2020 21:57:16: 25000000 INFO @ Thu, 08 Oct 2020 21:57:16: 31000000 INFO @ Thu, 08 Oct 2020 21:57:17: 37000000 INFO @ Thu, 08 Oct 2020 21:57:21: 26000000 INFO @ Thu, 08 Oct 2020 21:57:21: 32000000 INFO @ Thu, 08 Oct 2020 21:57:23: 38000000 INFO @ Thu, 08 Oct 2020 21:57:26: 27000000 INFO @ Thu, 08 Oct 2020 21:57:27: 33000000 INFO @ Thu, 08 Oct 2020 21:57:28: 39000000 INFO @ Thu, 08 Oct 2020 21:57:32: 28000000 INFO @ Thu, 08 Oct 2020 21:57:32: 34000000 INFO @ Thu, 08 Oct 2020 21:57:33: 40000000 INFO @ Thu, 08 Oct 2020 21:57:37: 29000000 INFO @ Thu, 08 Oct 2020 21:57:37: 35000000 INFO @ Thu, 08 Oct 2020 21:57:39: 41000000 INFO @ Thu, 08 Oct 2020 21:57:42: 30000000 INFO @ Thu, 08 Oct 2020 21:57:42: 36000000 INFO @ Thu, 08 Oct 2020 21:57:44: 42000000 INFO @ Thu, 08 Oct 2020 21:57:48: 37000000 INFO @ Thu, 08 Oct 2020 21:57:48: 31000000 INFO @ Thu, 08 Oct 2020 21:57:50: 43000000 INFO @ Thu, 08 Oct 2020 21:57:53: 38000000 INFO @ Thu, 08 Oct 2020 21:57:53: 32000000 INFO @ Thu, 08 Oct 2020 21:57:55: 44000000 INFO @ Thu, 08 Oct 2020 21:57:58: 39000000 INFO @ Thu, 08 Oct 2020 21:57:58: 33000000 INFO @ Thu, 08 Oct 2020 21:58:00: 45000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Thu, 08 Oct 2020 21:58:04: 40000000 INFO @ Thu, 08 Oct 2020 21:58:04: 34000000 INFO @ Thu, 08 Oct 2020 21:58:06: 46000000 INFO @ Thu, 08 Oct 2020 21:58:09: 41000000 INFO @ Thu, 08 Oct 2020 21:58:09: 35000000 INFO @ Thu, 08 Oct 2020 21:58:11: 47000000 INFO @ Thu, 08 Oct 2020 21:58:14: 42000000 INFO @ Thu, 08 Oct 2020 21:58:14: 36000000 INFO @ Thu, 08 Oct 2020 21:58:16: 48000000 INFO @ Thu, 08 Oct 2020 21:58:19: 37000000 INFO @ Thu, 08 Oct 2020 21:58:19: 43000000 INFO @ Thu, 08 Oct 2020 21:58:22: 49000000 INFO @ Thu, 08 Oct 2020 21:58:25: 38000000 INFO @ Thu, 08 Oct 2020 21:58:25: 44000000 INFO @ Thu, 08 Oct 2020 21:58:27: 50000000 INFO @ Thu, 08 Oct 2020 21:58:30: 39000000 INFO @ Thu, 08 Oct 2020 21:58:30: 45000000 INFO @ Thu, 08 Oct 2020 21:58:32: 51000000 INFO @ Thu, 08 Oct 2020 21:58:35: 40000000 INFO @ Thu, 08 Oct 2020 21:58:35: 46000000 INFO @ Thu, 08 Oct 2020 21:58:38: 52000000 INFO @ Thu, 08 Oct 2020 21:58:41: 47000000 INFO @ Thu, 08 Oct 2020 21:58:41: 41000000 INFO @ Thu, 08 Oct 2020 21:58:43: 53000000 INFO @ Thu, 08 Oct 2020 21:58:46: 48000000 INFO @ Thu, 08 Oct 2020 21:58:46: 42000000 INFO @ Thu, 08 Oct 2020 21:58:48: 54000000 INFO @ Thu, 08 Oct 2020 21:58:51: 49000000 INFO @ Thu, 08 Oct 2020 21:58:52: 43000000 INFO @ Thu, 08 Oct 2020 21:58:54: 55000000 INFO @ Thu, 08 Oct 2020 21:58:57: 50000000 INFO @ Thu, 08 Oct 2020 21:58:57: 44000000 INFO @ Thu, 08 Oct 2020 21:58:58: #1 tag size is determined as 42 bps INFO @ Thu, 08 Oct 2020 21:58:58: #1 tag size = 42 INFO @ Thu, 08 Oct 2020 21:58:58: #1 total tags in treatment: 25704500 INFO @ Thu, 08 Oct 2020 21:58:58: #1 user defined the maximum tags... INFO @ Thu, 08 Oct 2020 21:58:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 08 Oct 2020 21:58:59: #1 tags after filtering in treatment: 16639612 INFO @ Thu, 08 Oct 2020 21:58:59: #1 Redundant rate of treatment: 0.35 INFO @ Thu, 08 Oct 2020 21:58:59: #1 finished! INFO @ Thu, 08 Oct 2020 21:58:59: #2 Build Peak Model... INFO @ Thu, 08 Oct 2020 21:58:59: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 08 Oct 2020 21:59:00: #2 number of paired peaks: 3430 INFO @ Thu, 08 Oct 2020 21:59:00: start model_add_line... INFO @ Thu, 08 Oct 2020 21:59:00: start X-correlation... INFO @ Thu, 08 Oct 2020 21:59:00: end of X-cor INFO @ Thu, 08 Oct 2020 21:59:00: #2 finished! INFO @ Thu, 08 Oct 2020 21:59:00: #2 predicted fragment length is 265 bps INFO @ Thu, 08 Oct 2020 21:59:00: #2 alternative fragment length(s) may be 265 bps INFO @ Thu, 08 Oct 2020 21:59:00: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05_model.r INFO @ Thu, 08 Oct 2020 21:59:00: #3 Call peaks... INFO @ Thu, 08 Oct 2020 21:59:00: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 08 Oct 2020 21:59:02: 51000000 INFO @ Thu, 08 Oct 2020 21:59:02: 45000000 INFO @ Thu, 08 Oct 2020 21:59:07: 52000000 INFO @ Thu, 08 Oct 2020 21:59:07: 46000000 BigWig に変換しました。 INFO @ Thu, 08 Oct 2020 21:59:12: 53000000 INFO @ Thu, 08 Oct 2020 21:59:13: 47000000 INFO @ Thu, 08 Oct 2020 21:59:17: 54000000 INFO @ Thu, 08 Oct 2020 21:59:18: 48000000 INFO @ Thu, 08 Oct 2020 21:59:22: 55000000 INFO @ Thu, 08 Oct 2020 21:59:23: 49000000 INFO @ Thu, 08 Oct 2020 21:59:27: #1 tag size is determined as 42 bps INFO @ Thu, 08 Oct 2020 21:59:27: #1 tag size = 42 INFO @ Thu, 08 Oct 2020 21:59:27: #1 total tags in treatment: 25704500 INFO @ Thu, 08 Oct 2020 21:59:27: #1 user defined the maximum tags... INFO @ Thu, 08 Oct 2020 21:59:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 08 Oct 2020 21:59:27: #1 tags after filtering in treatment: 16639612 INFO @ Thu, 08 Oct 2020 21:59:27: #1 Redundant rate of treatment: 0.35 INFO @ Thu, 08 Oct 2020 21:59:27: #1 finished! INFO @ Thu, 08 Oct 2020 21:59:27: #2 Build Peak Model... INFO @ Thu, 08 Oct 2020 21:59:27: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 08 Oct 2020 21:59:28: 50000000 INFO @ Thu, 08 Oct 2020 21:59:29: #2 number of paired peaks: 3430 INFO @ Thu, 08 Oct 2020 21:59:29: start model_add_line... INFO @ Thu, 08 Oct 2020 21:59:29: start X-correlation... INFO @ Thu, 08 Oct 2020 21:59:29: end of X-cor INFO @ Thu, 08 Oct 2020 21:59:29: #2 finished! INFO @ Thu, 08 Oct 2020 21:59:29: #2 predicted fragment length is 265 bps INFO @ Thu, 08 Oct 2020 21:59:29: #2 alternative fragment length(s) may be 265 bps INFO @ Thu, 08 Oct 2020 21:59:29: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10_model.r INFO @ Thu, 08 Oct 2020 21:59:29: #3 Call peaks... INFO @ Thu, 08 Oct 2020 21:59:29: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 08 Oct 2020 21:59:33: 51000000 INFO @ Thu, 08 Oct 2020 21:59:38: 52000000 INFO @ Thu, 08 Oct 2020 21:59:43: 53000000 INFO @ Thu, 08 Oct 2020 21:59:47: #3 Call peaks for each chromosome... INFO @ Thu, 08 Oct 2020 21:59:48: 54000000 INFO @ Thu, 08 Oct 2020 21:59:53: 55000000 INFO @ Thu, 08 Oct 2020 21:59:57: #1 tag size is determined as 42 bps INFO @ Thu, 08 Oct 2020 21:59:57: #1 tag size = 42 INFO @ Thu, 08 Oct 2020 21:59:57: #1 total tags in treatment: 25704500 INFO @ Thu, 08 Oct 2020 21:59:57: #1 user defined the maximum tags... INFO @ Thu, 08 Oct 2020 21:59:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 08 Oct 2020 21:59:58: #1 tags after filtering in treatment: 16639612 INFO @ Thu, 08 Oct 2020 21:59:58: #1 Redundant rate of treatment: 0.35 INFO @ Thu, 08 Oct 2020 21:59:58: #1 finished! INFO @ Thu, 08 Oct 2020 21:59:58: #2 Build Peak Model... INFO @ Thu, 08 Oct 2020 21:59:58: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 08 Oct 2020 21:59:59: #2 number of paired peaks: 3430 INFO @ Thu, 08 Oct 2020 21:59:59: start model_add_line... INFO @ Thu, 08 Oct 2020 21:59:59: start X-correlation... INFO @ Thu, 08 Oct 2020 21:59:59: end of X-cor INFO @ Thu, 08 Oct 2020 21:59:59: #2 finished! INFO @ Thu, 08 Oct 2020 21:59:59: #2 predicted fragment length is 265 bps INFO @ Thu, 08 Oct 2020 21:59:59: #2 alternative fragment length(s) may be 265 bps INFO @ Thu, 08 Oct 2020 21:59:59: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20_model.r INFO @ Thu, 08 Oct 2020 21:59:59: #3 Call peaks... INFO @ Thu, 08 Oct 2020 21:59:59: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 08 Oct 2020 22:00:05: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05_peaks.xls INFO @ Thu, 08 Oct 2020 22:00:05: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05_peaks.narrowPeak INFO @ Thu, 08 Oct 2020 22:00:05: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05_summits.bed INFO @ Thu, 08 Oct 2020 22:00:05: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (7810 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Thu, 08 Oct 2020 22:00:15: #3 Call peaks for each chromosome... INFO @ Thu, 08 Oct 2020 22:00:33: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10_peaks.xls INFO @ Thu, 08 Oct 2020 22:00:33: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10_peaks.narrowPeak INFO @ Thu, 08 Oct 2020 22:00:33: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10_summits.bed INFO @ Thu, 08 Oct 2020 22:00:33: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (6045 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Thu, 08 Oct 2020 22:00:46: #3 Call peaks for each chromosome... INFO @ Thu, 08 Oct 2020 22:01:04: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20_peaks.xls INFO @ Thu, 08 Oct 2020 22:01:04: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20_peaks.narrowPeak INFO @ Thu, 08 Oct 2020 22:01:04: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20_summits.bed INFO @ Thu, 08 Oct 2020 22:01:04: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (4537 records, 4 fields): 6 millis CompletedMACS2peakCalling