Job ID = 14167218 SRX = SRX9047372 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 36206329 spots for SRR12558900/SRR12558900.sra Written 36206329 spots for SRR12558900/SRR12558900.sra fastq に変換しました。 bowtie でマッピング中... Your job 14167975 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:54:03 36206329 reads; of these: 36206329 (100.00%) were paired; of these: 4976717 (13.75%) aligned concordantly 0 times 24357336 (67.27%) aligned concordantly exactly 1 time 6872276 (18.98%) aligned concordantly >1 times ---- 4976717 pairs aligned concordantly 0 times; of these: 1080687 (21.71%) aligned discordantly 1 time ---- 3896030 pairs aligned 0 times concordantly or discordantly; of these: 7792060 mates make up the pairs; of these: 5259389 (67.50%) aligned 0 times 1269029 (16.29%) aligned exactly 1 time 1263642 (16.22%) aligned >1 times 92.74% overall alignment rate Time searching: 00:54:03 Overall time: 00:54:03 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 28 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 5641591 / 32266329 = 0.1748 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 12:15:22: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 12:15:22: #1 read tag files... INFO @ Fri, 10 Dec 2021 12:15:22: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 12:15:28: 1000000 INFO @ Fri, 10 Dec 2021 12:15:35: 2000000 INFO @ Fri, 10 Dec 2021 12:15:41: 3000000 INFO @ Fri, 10 Dec 2021 12:15:48: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 12:15:51: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 12:15:51: #1 read tag files... INFO @ Fri, 10 Dec 2021 12:15:51: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 12:15:55: 5000000 INFO @ Fri, 10 Dec 2021 12:15:58: 1000000 INFO @ Fri, 10 Dec 2021 12:16:03: 6000000 INFO @ Fri, 10 Dec 2021 12:16:05: 2000000 INFO @ Fri, 10 Dec 2021 12:16:11: 7000000 INFO @ Fri, 10 Dec 2021 12:16:12: 3000000 INFO @ Fri, 10 Dec 2021 12:16:18: 8000000 INFO @ Fri, 10 Dec 2021 12:16:19: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 10 Dec 2021 12:16:22: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 10 Dec 2021 12:16:22: #1 read tag files... INFO @ Fri, 10 Dec 2021 12:16:22: #1 read treatment tags... INFO @ Fri, 10 Dec 2021 12:16:26: 9000000 INFO @ Fri, 10 Dec 2021 12:16:27: 5000000 INFO @ Fri, 10 Dec 2021 12:16:29: 1000000 INFO @ Fri, 10 Dec 2021 12:16:34: 10000000 INFO @ Fri, 10 Dec 2021 12:16:34: 6000000 INFO @ Fri, 10 Dec 2021 12:16:36: 2000000 INFO @ Fri, 10 Dec 2021 12:16:41: 7000000 INFO @ Fri, 10 Dec 2021 12:16:42: 11000000 INFO @ Fri, 10 Dec 2021 12:16:43: 3000000 INFO @ Fri, 10 Dec 2021 12:16:49: 8000000 INFO @ Fri, 10 Dec 2021 12:16:49: 12000000 INFO @ Fri, 10 Dec 2021 12:16:51: 4000000 INFO @ Fri, 10 Dec 2021 12:16:56: 9000000 INFO @ Fri, 10 Dec 2021 12:16:57: 13000000 INFO @ Fri, 10 Dec 2021 12:16:59: 5000000 INFO @ Fri, 10 Dec 2021 12:17:03: 10000000 INFO @ Fri, 10 Dec 2021 12:17:05: 14000000 INFO @ Fri, 10 Dec 2021 12:17:06: 6000000 INFO @ Fri, 10 Dec 2021 12:17:11: 11000000 INFO @ Fri, 10 Dec 2021 12:17:13: 15000000 INFO @ Fri, 10 Dec 2021 12:17:14: 7000000 INFO @ Fri, 10 Dec 2021 12:17:18: 12000000 INFO @ Fri, 10 Dec 2021 12:17:21: 16000000 INFO @ Fri, 10 Dec 2021 12:17:22: 8000000 INFO @ Fri, 10 Dec 2021 12:17:26: 13000000 INFO @ Fri, 10 Dec 2021 12:17:28: 17000000 INFO @ Fri, 10 Dec 2021 12:17:29: 9000000 INFO @ Fri, 10 Dec 2021 12:17:33: 14000000 INFO @ Fri, 10 Dec 2021 12:17:36: 18000000 INFO @ Fri, 10 Dec 2021 12:17:37: 10000000 INFO @ Fri, 10 Dec 2021 12:17:40: 15000000 INFO @ Fri, 10 Dec 2021 12:17:44: 19000000 INFO @ Fri, 10 Dec 2021 12:17:45: 11000000 INFO @ Fri, 10 Dec 2021 12:17:48: 16000000 INFO @ Fri, 10 Dec 2021 12:17:52: 20000000 INFO @ Fri, 10 Dec 2021 12:17:52: 12000000 INFO @ Fri, 10 Dec 2021 12:17:55: 17000000 INFO @ Fri, 10 Dec 2021 12:17:59: 21000000 INFO @ Fri, 10 Dec 2021 12:18:00: 13000000 INFO @ Fri, 10 Dec 2021 12:18:03: 18000000 INFO @ Fri, 10 Dec 2021 12:18:07: 22000000 INFO @ Fri, 10 Dec 2021 12:18:08: 14000000 INFO @ Fri, 10 Dec 2021 12:18:10: 19000000 INFO @ Fri, 10 Dec 2021 12:18:14: 23000000 INFO @ Fri, 10 Dec 2021 12:18:15: 15000000 INFO @ Fri, 10 Dec 2021 12:18:18: 20000000 INFO @ Fri, 10 Dec 2021 12:18:22: 24000000 INFO @ Fri, 10 Dec 2021 12:18:23: 16000000 INFO @ Fri, 10 Dec 2021 12:18:25: 21000000 INFO @ Fri, 10 Dec 2021 12:18:29: 25000000 INFO @ Fri, 10 Dec 2021 12:18:31: 17000000 INFO @ Fri, 10 Dec 2021 12:18:32: 22000000 INFO @ Fri, 10 Dec 2021 12:18:37: 26000000 INFO @ Fri, 10 Dec 2021 12:18:38: 18000000 INFO @ Fri, 10 Dec 2021 12:18:40: 23000000 INFO @ Fri, 10 Dec 2021 12:18:44: 27000000 INFO @ Fri, 10 Dec 2021 12:18:46: 19000000 INFO @ Fri, 10 Dec 2021 12:18:47: 24000000 INFO @ Fri, 10 Dec 2021 12:18:52: 28000000 INFO @ Fri, 10 Dec 2021 12:18:53: 20000000 INFO @ Fri, 10 Dec 2021 12:18:54: 25000000 INFO @ Fri, 10 Dec 2021 12:19:00: 29000000 INFO @ Fri, 10 Dec 2021 12:19:01: 21000000 INFO @ Fri, 10 Dec 2021 12:19:01: 26000000 INFO @ Fri, 10 Dec 2021 12:19:07: 30000000 INFO @ Fri, 10 Dec 2021 12:19:08: 22000000 INFO @ Fri, 10 Dec 2021 12:19:09: 27000000 INFO @ Fri, 10 Dec 2021 12:19:15: 31000000 INFO @ Fri, 10 Dec 2021 12:19:16: 23000000 INFO @ Fri, 10 Dec 2021 12:19:16: 28000000 INFO @ Fri, 10 Dec 2021 12:19:23: 32000000 INFO @ Fri, 10 Dec 2021 12:19:23: 24000000 INFO @ Fri, 10 Dec 2021 12:19:23: 29000000 INFO @ Fri, 10 Dec 2021 12:19:30: 33000000 INFO @ Fri, 10 Dec 2021 12:19:30: 25000000 INFO @ Fri, 10 Dec 2021 12:19:30: 30000000 INFO @ Fri, 10 Dec 2021 12:19:38: 31000000 INFO @ Fri, 10 Dec 2021 12:19:38: 34000000 INFO @ Fri, 10 Dec 2021 12:19:38: 26000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 10 Dec 2021 12:19:45: 32000000 INFO @ Fri, 10 Dec 2021 12:19:45: 35000000 INFO @ Fri, 10 Dec 2021 12:19:46: 27000000 INFO @ Fri, 10 Dec 2021 12:19:52: 33000000 INFO @ Fri, 10 Dec 2021 12:19:53: 36000000 INFO @ Fri, 10 Dec 2021 12:19:53: 28000000 INFO @ Fri, 10 Dec 2021 12:20:00: 34000000 INFO @ Fri, 10 Dec 2021 12:20:00: 37000000 INFO @ Fri, 10 Dec 2021 12:20:01: 29000000 INFO @ Fri, 10 Dec 2021 12:20:07: 35000000 INFO @ Fri, 10 Dec 2021 12:20:08: 38000000 INFO @ Fri, 10 Dec 2021 12:20:08: 30000000 INFO @ Fri, 10 Dec 2021 12:20:14: 36000000 INFO @ Fri, 10 Dec 2021 12:20:15: 31000000 INFO @ Fri, 10 Dec 2021 12:20:15: 39000000 INFO @ Fri, 10 Dec 2021 12:20:22: 37000000 INFO @ Fri, 10 Dec 2021 12:20:23: 32000000 INFO @ Fri, 10 Dec 2021 12:20:23: 40000000 INFO @ Fri, 10 Dec 2021 12:20:29: 38000000 INFO @ Fri, 10 Dec 2021 12:20:30: 33000000 INFO @ Fri, 10 Dec 2021 12:20:31: 41000000 INFO @ Fri, 10 Dec 2021 12:20:36: 39000000 INFO @ Fri, 10 Dec 2021 12:20:38: 34000000 INFO @ Fri, 10 Dec 2021 12:20:38: 42000000 INFO @ Fri, 10 Dec 2021 12:20:44: 40000000 INFO @ Fri, 10 Dec 2021 12:20:45: 35000000 INFO @ Fri, 10 Dec 2021 12:20:46: 43000000 BigWig に変換しました。 INFO @ Fri, 10 Dec 2021 12:20:51: 41000000 INFO @ Fri, 10 Dec 2021 12:20:52: 36000000 INFO @ Fri, 10 Dec 2021 12:20:54: 44000000 INFO @ Fri, 10 Dec 2021 12:20:59: 42000000 INFO @ Fri, 10 Dec 2021 12:21:00: 37000000 INFO @ Fri, 10 Dec 2021 12:21:01: 45000000 INFO @ Fri, 10 Dec 2021 12:21:06: 43000000 INFO @ Fri, 10 Dec 2021 12:21:08: 38000000 INFO @ Fri, 10 Dec 2021 12:21:09: 46000000 INFO @ Fri, 10 Dec 2021 12:21:14: 44000000 INFO @ Fri, 10 Dec 2021 12:21:15: 39000000 INFO @ Fri, 10 Dec 2021 12:21:17: 47000000 INFO @ Fri, 10 Dec 2021 12:21:21: 45000000 INFO @ Fri, 10 Dec 2021 12:21:23: 40000000 INFO @ Fri, 10 Dec 2021 12:21:24: 48000000 INFO @ Fri, 10 Dec 2021 12:21:29: 46000000 INFO @ Fri, 10 Dec 2021 12:21:30: 41000000 INFO @ Fri, 10 Dec 2021 12:21:32: 49000000 INFO @ Fri, 10 Dec 2021 12:21:36: 47000000 INFO @ Fri, 10 Dec 2021 12:21:38: 42000000 INFO @ Fri, 10 Dec 2021 12:21:40: 50000000 INFO @ Fri, 10 Dec 2021 12:21:44: 48000000 INFO @ Fri, 10 Dec 2021 12:21:45: 43000000 INFO @ Fri, 10 Dec 2021 12:21:47: 51000000 INFO @ Fri, 10 Dec 2021 12:21:51: 49000000 INFO @ Fri, 10 Dec 2021 12:21:53: 44000000 INFO @ Fri, 10 Dec 2021 12:21:55: 52000000 INFO @ Fri, 10 Dec 2021 12:21:59: 50000000 INFO @ Fri, 10 Dec 2021 12:22:01: 45000000 INFO @ Fri, 10 Dec 2021 12:22:03: 53000000 INFO @ Fri, 10 Dec 2021 12:22:06: 51000000 INFO @ Fri, 10 Dec 2021 12:22:08: 46000000 INFO @ Fri, 10 Dec 2021 12:22:10: 54000000 INFO @ Fri, 10 Dec 2021 12:22:14: 52000000 INFO @ Fri, 10 Dec 2021 12:22:16: 47000000 INFO @ Fri, 10 Dec 2021 12:22:18: 55000000 INFO @ Fri, 10 Dec 2021 12:22:21: 53000000 INFO @ Fri, 10 Dec 2021 12:22:23: 48000000 INFO @ Fri, 10 Dec 2021 12:22:25: #1 tag size is determined as 42 bps INFO @ Fri, 10 Dec 2021 12:22:25: #1 tag size = 42 INFO @ Fri, 10 Dec 2021 12:22:25: #1 total tags in treatment: 25704500 INFO @ Fri, 10 Dec 2021 12:22:25: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 12:22:25: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 12:22:25: #1 tags after filtering in treatment: 16639612 INFO @ Fri, 10 Dec 2021 12:22:25: #1 Redundant rate of treatment: 0.35 INFO @ Fri, 10 Dec 2021 12:22:25: #1 finished! INFO @ Fri, 10 Dec 2021 12:22:25: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 12:22:25: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 12:22:27: #2 number of paired peaks: 3430 INFO @ Fri, 10 Dec 2021 12:22:27: start model_add_line... INFO @ Fri, 10 Dec 2021 12:22:27: start X-correlation... INFO @ Fri, 10 Dec 2021 12:22:27: end of X-cor INFO @ Fri, 10 Dec 2021 12:22:27: #2 finished! INFO @ Fri, 10 Dec 2021 12:22:27: #2 predicted fragment length is 265 bps INFO @ Fri, 10 Dec 2021 12:22:27: #2 alternative fragment length(s) may be 265 bps INFO @ Fri, 10 Dec 2021 12:22:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05_model.r INFO @ Fri, 10 Dec 2021 12:22:27: #3 Call peaks... INFO @ Fri, 10 Dec 2021 12:22:27: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 12:22:29: 54000000 INFO @ Fri, 10 Dec 2021 12:22:30: 49000000 INFO @ Fri, 10 Dec 2021 12:22:36: 55000000 INFO @ Fri, 10 Dec 2021 12:22:38: 50000000 INFO @ Fri, 10 Dec 2021 12:22:42: #1 tag size is determined as 42 bps INFO @ Fri, 10 Dec 2021 12:22:42: #1 tag size = 42 INFO @ Fri, 10 Dec 2021 12:22:42: #1 total tags in treatment: 25704500 INFO @ Fri, 10 Dec 2021 12:22:42: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 12:22:42: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 12:22:43: #1 tags after filtering in treatment: 16639612 INFO @ Fri, 10 Dec 2021 12:22:43: #1 Redundant rate of treatment: 0.35 INFO @ Fri, 10 Dec 2021 12:22:43: #1 finished! INFO @ Fri, 10 Dec 2021 12:22:43: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 12:22:43: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 12:22:44: #2 number of paired peaks: 3430 INFO @ Fri, 10 Dec 2021 12:22:44: start model_add_line... INFO @ Fri, 10 Dec 2021 12:22:45: start X-correlation... INFO @ Fri, 10 Dec 2021 12:22:45: end of X-cor INFO @ Fri, 10 Dec 2021 12:22:45: #2 finished! INFO @ Fri, 10 Dec 2021 12:22:45: #2 predicted fragment length is 265 bps INFO @ Fri, 10 Dec 2021 12:22:45: #2 alternative fragment length(s) may be 265 bps INFO @ Fri, 10 Dec 2021 12:22:45: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10_model.r INFO @ Fri, 10 Dec 2021 12:22:45: #3 Call peaks... INFO @ Fri, 10 Dec 2021 12:22:45: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 12:22:45: 51000000 INFO @ Fri, 10 Dec 2021 12:22:51: 52000000 INFO @ Fri, 10 Dec 2021 12:22:58: 53000000 INFO @ Fri, 10 Dec 2021 12:23:04: 54000000 INFO @ Fri, 10 Dec 2021 12:23:11: 55000000 INFO @ Fri, 10 Dec 2021 12:23:14: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 12:23:16: #1 tag size is determined as 42 bps INFO @ Fri, 10 Dec 2021 12:23:16: #1 tag size = 42 INFO @ Fri, 10 Dec 2021 12:23:16: #1 total tags in treatment: 25704500 INFO @ Fri, 10 Dec 2021 12:23:16: #1 user defined the maximum tags... INFO @ Fri, 10 Dec 2021 12:23:16: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 10 Dec 2021 12:23:17: #1 tags after filtering in treatment: 16639612 INFO @ Fri, 10 Dec 2021 12:23:17: #1 Redundant rate of treatment: 0.35 INFO @ Fri, 10 Dec 2021 12:23:17: #1 finished! INFO @ Fri, 10 Dec 2021 12:23:17: #2 Build Peak Model... INFO @ Fri, 10 Dec 2021 12:23:17: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 10 Dec 2021 12:23:18: #2 number of paired peaks: 3430 INFO @ Fri, 10 Dec 2021 12:23:18: start model_add_line... INFO @ Fri, 10 Dec 2021 12:23:18: start X-correlation... INFO @ Fri, 10 Dec 2021 12:23:18: end of X-cor INFO @ Fri, 10 Dec 2021 12:23:18: #2 finished! INFO @ Fri, 10 Dec 2021 12:23:18: #2 predicted fragment length is 265 bps INFO @ Fri, 10 Dec 2021 12:23:18: #2 alternative fragment length(s) may be 265 bps INFO @ Fri, 10 Dec 2021 12:23:18: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20_model.r INFO @ Fri, 10 Dec 2021 12:23:18: #3 Call peaks... INFO @ Fri, 10 Dec 2021 12:23:18: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 10 Dec 2021 12:23:32: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05_peaks.xls INFO @ Fri, 10 Dec 2021 12:23:33: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 12:23:33: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.05_summits.bed INFO @ Fri, 10 Dec 2021 12:23:33: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 12:23:33: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (7810 records, 4 fields): 14 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 12:23:51: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10_peaks.xls INFO @ Fri, 10 Dec 2021 12:23:51: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 12:23:51: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.10_summits.bed INFO @ Fri, 10 Dec 2021 12:23:51: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (6045 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Fri, 10 Dec 2021 12:24:07: #3 Call peaks for each chromosome... INFO @ Fri, 10 Dec 2021 12:24:25: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20_peaks.xls INFO @ Fri, 10 Dec 2021 12:24:25: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20_peaks.narrowPeak INFO @ Fri, 10 Dec 2021 12:24:25: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX9047372/SRX9047372.20_summits.bed INFO @ Fri, 10 Dec 2021 12:24:25: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (4537 records, 4 fields): 123 millis CompletedMACS2peakCalling