Job ID = 6627005 SRX = SRX8156232 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-07-14T00:18:48 prefetch.2.10.7: 1) Downloading 'SRR11588769'... 2020-07-14T00:18:48 prefetch.2.10.7: Downloading via HTTPS... 2020-07-14T00:22:37 prefetch.2.10.7: HTTPS download succeed 2020-07-14T00:22:37 prefetch.2.10.7: 1) 'SRR11588769' was downloaded successfully 2020-07-14T00:23:15 prefetch.2.10.7: 'SRR11588769' has 7 unresolved dependencies 2020-07-14T00:23:15 prefetch.2.10.7: 2) Downloading 'ncbi-acc:AE013599.5?vdb-ctx=refseq'... 2020-07-14T00:23:15 prefetch.2.10.7: Downloading via HTTPS... 2020-07-14T00:23:31 prefetch.2.10.7: HTTPS download succeed 2020-07-14T00:23:31 prefetch.2.10.7: 2) 'ncbi-acc:AE013599.5?vdb-ctx=refseq' was downloaded successfully 2020-07-14T00:23:31 prefetch.2.10.7: 3) Downloading 'ncbi-acc:AE014134.6?vdb-ctx=refseq'... 2020-07-14T00:23:31 prefetch.2.10.7: Downloading via HTTPS... 2020-07-14T00:23:48 prefetch.2.10.7: HTTPS download succeed 2020-07-14T00:23:48 prefetch.2.10.7: 3) 'ncbi-acc:AE014134.6?vdb-ctx=refseq' was downloaded successfully 2020-07-14T00:23:48 prefetch.2.10.7: 4) Downloading 'ncbi-acc:AE014135.4?vdb-ctx=refseq'... 2020-07-14T00:23:48 prefetch.2.10.7: Downloading via HTTPS... 2020-07-14T00:23:57 prefetch.2.10.7: HTTPS download succeed 2020-07-14T00:23:57 prefetch.2.10.7: 4) 'ncbi-acc:AE014135.4?vdb-ctx=refseq' was downloaded successfully 2020-07-14T00:23:57 prefetch.2.10.7: 5) Downloading 'ncbi-acc:AE014296.5?vdb-ctx=refseq'... 2020-07-14T00:23:57 prefetch.2.10.7: Downloading via HTTPS... 2020-07-14T00:24:10 prefetch.2.10.7: HTTPS download succeed 2020-07-14T00:24:10 prefetch.2.10.7: 5) 'ncbi-acc:AE014296.5?vdb-ctx=refseq' was downloaded successfully 2020-07-14T00:24:10 prefetch.2.10.7: 6) Downloading 'ncbi-acc:AE014297.3?vdb-ctx=refseq'... 2020-07-14T00:24:10 prefetch.2.10.7: Downloading via HTTPS... 2020-07-14T00:24:23 prefetch.2.10.7: HTTPS download succeed 2020-07-14T00:24:23 prefetch.2.10.7: 6) 'ncbi-acc:AE014297.3?vdb-ctx=refseq' was downloaded successfully 2020-07-14T00:24:23 prefetch.2.10.7: 7) Downloading 'ncbi-acc:AE014298.5?vdb-ctx=refseq'... 2020-07-14T00:24:23 prefetch.2.10.7: Downloading via HTTPS... 2020-07-14T00:24:34 prefetch.2.10.7: HTTPS download succeed 2020-07-14T00:24:34 prefetch.2.10.7: 7) 'ncbi-acc:AE014298.5?vdb-ctx=refseq' was downloaded successfully 2020-07-14T00:24:34 prefetch.2.10.7: 8) Downloading 'ncbi-acc:CP007106.1?vdb-ctx=refseq'... 2020-07-14T00:24:34 prefetch.2.10.7: Downloading via HTTPS... 2020-07-14T00:24:50 prefetch.2.10.7: HTTPS download succeed 2020-07-14T00:24:50 prefetch.2.10.7: 8) 'ncbi-acc:CP007106.1?vdb-ctx=refseq' was downloaded successfully Read 20381265 spots for SRR11588769/SRR11588769.sra Written 20381265 spots for SRR11588769/SRR11588769.sra fastq に変換しました。 bowtie でマッピング中... Your job 6627343 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 00:36:20 20381265 reads; of these: 20381265 (100.00%) were paired; of these: 1225306 (6.01%) aligned concordantly 0 times 15372368 (75.42%) aligned concordantly exactly 1 time 3783591 (18.56%) aligned concordantly >1 times ---- 1225306 pairs aligned concordantly 0 times; of these: 152539 (12.45%) aligned discordantly 1 time ---- 1072767 pairs aligned 0 times concordantly or discordantly; of these: 2145534 mates make up the pairs; of these: 1430899 (66.69%) aligned 0 times 429209 (20.00%) aligned exactly 1 time 285426 (13.30%) aligned >1 times 96.49% overall alignment rate Time searching: 00:36:20 Overall time: 00:36:20 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 4339767 / 19001561 = 0.2284 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 14 Jul 2020 10:25:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 14 Jul 2020 10:25:33: #1 read tag files... INFO @ Tue, 14 Jul 2020 10:25:33: #1 read treatment tags... INFO @ Tue, 14 Jul 2020 10:25:38: 1000000 INFO @ Tue, 14 Jul 2020 10:25:43: 2000000 INFO @ Tue, 14 Jul 2020 10:25:49: 3000000 INFO @ Tue, 14 Jul 2020 10:25:54: 4000000 INFO @ Tue, 14 Jul 2020 10:25:59: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 14 Jul 2020 10:26:03: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 14 Jul 2020 10:26:03: #1 read tag files... INFO @ Tue, 14 Jul 2020 10:26:03: #1 read treatment tags... INFO @ Tue, 14 Jul 2020 10:26:05: 6000000 INFO @ Tue, 14 Jul 2020 10:26:09: 1000000 INFO @ Tue, 14 Jul 2020 10:26:11: 7000000 INFO @ Tue, 14 Jul 2020 10:26:15: 2000000 INFO @ Tue, 14 Jul 2020 10:26:17: 8000000 INFO @ Tue, 14 Jul 2020 10:26:21: 3000000 INFO @ Tue, 14 Jul 2020 10:26:23: 9000000 INFO @ Tue, 14 Jul 2020 10:26:27: 4000000 INFO @ Tue, 14 Jul 2020 10:26:29: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 14 Jul 2020 10:26:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 14 Jul 2020 10:26:33: #1 read tag files... INFO @ Tue, 14 Jul 2020 10:26:33: #1 read treatment tags... INFO @ Tue, 14 Jul 2020 10:26:34: 5000000 INFO @ Tue, 14 Jul 2020 10:26:35: 11000000 INFO @ Tue, 14 Jul 2020 10:26:39: 1000000 INFO @ Tue, 14 Jul 2020 10:26:40: 6000000 INFO @ Tue, 14 Jul 2020 10:26:41: 12000000 INFO @ Tue, 14 Jul 2020 10:26:45: 2000000 INFO @ Tue, 14 Jul 2020 10:26:46: 7000000 INFO @ Tue, 14 Jul 2020 10:26:48: 13000000 INFO @ Tue, 14 Jul 2020 10:26:52: 3000000 INFO @ Tue, 14 Jul 2020 10:26:53: 8000000 INFO @ Tue, 14 Jul 2020 10:26:54: 14000000 INFO @ Tue, 14 Jul 2020 10:26:58: 4000000 INFO @ Tue, 14 Jul 2020 10:26:59: 9000000 INFO @ Tue, 14 Jul 2020 10:27:00: 15000000 INFO @ Tue, 14 Jul 2020 10:27:04: 5000000 INFO @ Tue, 14 Jul 2020 10:27:05: 10000000 INFO @ Tue, 14 Jul 2020 10:27:06: 16000000 INFO @ Tue, 14 Jul 2020 10:27:10: 6000000 INFO @ Tue, 14 Jul 2020 10:27:11: 11000000 INFO @ Tue, 14 Jul 2020 10:27:12: 17000000 INFO @ Tue, 14 Jul 2020 10:27:17: 7000000 INFO @ Tue, 14 Jul 2020 10:27:17: 12000000 INFO @ Tue, 14 Jul 2020 10:27:18: 18000000 INFO @ Tue, 14 Jul 2020 10:27:23: 8000000 INFO @ Tue, 14 Jul 2020 10:27:23: 13000000 INFO @ Tue, 14 Jul 2020 10:27:24: 19000000 INFO @ Tue, 14 Jul 2020 10:27:29: 9000000 INFO @ Tue, 14 Jul 2020 10:27:30: 14000000 INFO @ Tue, 14 Jul 2020 10:27:30: 20000000 INFO @ Tue, 14 Jul 2020 10:27:35: 10000000 INFO @ Tue, 14 Jul 2020 10:27:36: 15000000 INFO @ Tue, 14 Jul 2020 10:27:36: 21000000 INFO @ Tue, 14 Jul 2020 10:27:42: 16000000 INFO @ Tue, 14 Jul 2020 10:27:42: 22000000 INFO @ Tue, 14 Jul 2020 10:27:42: 11000000 INFO @ Tue, 14 Jul 2020 10:27:48: 17000000 INFO @ Tue, 14 Jul 2020 10:27:48: 23000000 INFO @ Tue, 14 Jul 2020 10:27:48: 12000000 INFO @ Tue, 14 Jul 2020 10:27:54: 18000000 INFO @ Tue, 14 Jul 2020 10:27:54: 24000000 INFO @ Tue, 14 Jul 2020 10:27:54: 13000000 INFO @ Tue, 14 Jul 2020 10:27:59: 19000000 INFO @ Tue, 14 Jul 2020 10:28:00: 25000000 INFO @ Tue, 14 Jul 2020 10:28:00: 14000000 INFO @ Tue, 14 Jul 2020 10:28:05: 20000000 INFO @ Tue, 14 Jul 2020 10:28:06: 26000000 INFO @ Tue, 14 Jul 2020 10:28:06: 15000000 INFO @ Tue, 14 Jul 2020 10:28:11: 21000000 INFO @ Tue, 14 Jul 2020 10:28:12: 27000000 INFO @ Tue, 14 Jul 2020 10:28:12: 16000000 INFO @ Tue, 14 Jul 2020 10:28:17: 22000000 INFO @ Tue, 14 Jul 2020 10:28:18: 28000000 INFO @ Tue, 14 Jul 2020 10:28:18: 17000000 INFO @ Tue, 14 Jul 2020 10:28:23: 23000000 INFO @ Tue, 14 Jul 2020 10:28:24: 29000000 INFO @ Tue, 14 Jul 2020 10:28:24: 18000000 INFO @ Tue, 14 Jul 2020 10:28:29: 24000000 INFO @ Tue, 14 Jul 2020 10:28:30: 30000000 INFO @ Tue, 14 Jul 2020 10:28:31: 19000000 INFO @ Tue, 14 Jul 2020 10:28:34: #1 tag size is determined as 74 bps INFO @ Tue, 14 Jul 2020 10:28:34: #1 tag size = 74 INFO @ Tue, 14 Jul 2020 10:28:34: #1 total tags in treatment: 14827906 INFO @ Tue, 14 Jul 2020 10:28:34: #1 user defined the maximum tags... INFO @ Tue, 14 Jul 2020 10:28:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 14 Jul 2020 10:28:35: #1 tags after filtering in treatment: 13589100 INFO @ Tue, 14 Jul 2020 10:28:35: #1 Redundant rate of treatment: 0.08 INFO @ Tue, 14 Jul 2020 10:28:35: #1 finished! INFO @ Tue, 14 Jul 2020 10:28:35: #2 Build Peak Model... INFO @ Tue, 14 Jul 2020 10:28:35: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 14 Jul 2020 10:28:35: #2 number of paired peaks: 497 WARNING @ Tue, 14 Jul 2020 10:28:35: Fewer paired peaks (497) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 497 pairs to build model! INFO @ Tue, 14 Jul 2020 10:28:35: start model_add_line... INFO @ Tue, 14 Jul 2020 10:28:36: start X-correlation... INFO @ Tue, 14 Jul 2020 10:28:36: end of X-cor INFO @ Tue, 14 Jul 2020 10:28:36: #2 finished! INFO @ Tue, 14 Jul 2020 10:28:36: #2 predicted fragment length is 179 bps INFO @ Tue, 14 Jul 2020 10:28:36: #2 alternative fragment length(s) may be 179 bps INFO @ Tue, 14 Jul 2020 10:28:36: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.05_model.r INFO @ Tue, 14 Jul 2020 10:28:36: #3 Call peaks... INFO @ Tue, 14 Jul 2020 10:28:36: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 14 Jul 2020 10:28:36: 25000000 INFO @ Tue, 14 Jul 2020 10:28:37: 20000000 INFO @ Tue, 14 Jul 2020 10:28:42: 26000000 INFO @ Tue, 14 Jul 2020 10:28:43: 21000000 INFO @ Tue, 14 Jul 2020 10:28:48: 27000000 INFO @ Tue, 14 Jul 2020 10:28:49: 22000000 INFO @ Tue, 14 Jul 2020 10:28:54: 28000000 INFO @ Tue, 14 Jul 2020 10:28:55: 23000000 INFO @ Tue, 14 Jul 2020 10:29:00: 29000000 INFO @ Tue, 14 Jul 2020 10:29:01: 24000000 INFO @ Tue, 14 Jul 2020 10:29:04: #3 Call peaks for each chromosome... INFO @ Tue, 14 Jul 2020 10:29:06: 30000000 INFO @ Tue, 14 Jul 2020 10:29:08: 25000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 14 Jul 2020 10:29:10: #1 tag size is determined as 74 bps INFO @ Tue, 14 Jul 2020 10:29:10: #1 tag size = 74 INFO @ Tue, 14 Jul 2020 10:29:10: #1 total tags in treatment: 14827906 INFO @ Tue, 14 Jul 2020 10:29:10: #1 user defined the maximum tags... INFO @ Tue, 14 Jul 2020 10:29:10: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 14 Jul 2020 10:29:10: #1 tags after filtering in treatment: 13589100 INFO @ Tue, 14 Jul 2020 10:29:10: #1 Redundant rate of treatment: 0.08 INFO @ Tue, 14 Jul 2020 10:29:10: #1 finished! INFO @ Tue, 14 Jul 2020 10:29:10: #2 Build Peak Model... INFO @ Tue, 14 Jul 2020 10:29:10: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 14 Jul 2020 10:29:11: #2 number of paired peaks: 497 WARNING @ Tue, 14 Jul 2020 10:29:11: Fewer paired peaks (497) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 497 pairs to build model! INFO @ Tue, 14 Jul 2020 10:29:11: start model_add_line... INFO @ Tue, 14 Jul 2020 10:29:11: start X-correlation... INFO @ Tue, 14 Jul 2020 10:29:11: end of X-cor INFO @ Tue, 14 Jul 2020 10:29:11: #2 finished! INFO @ Tue, 14 Jul 2020 10:29:11: #2 predicted fragment length is 179 bps INFO @ Tue, 14 Jul 2020 10:29:11: #2 alternative fragment length(s) may be 179 bps INFO @ Tue, 14 Jul 2020 10:29:11: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.10_model.r INFO @ Tue, 14 Jul 2020 10:29:11: #3 Call peaks... INFO @ Tue, 14 Jul 2020 10:29:11: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 14 Jul 2020 10:29:13: 26000000 INFO @ Tue, 14 Jul 2020 10:29:19: 27000000 INFO @ Tue, 14 Jul 2020 10:29:19: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.05_peaks.xls INFO @ Tue, 14 Jul 2020 10:29:19: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.05_peaks.narrowPeak INFO @ Tue, 14 Jul 2020 10:29:19: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.05_summits.bed INFO @ Tue, 14 Jul 2020 10:29:19: Done! pass1 - making usageList (15 chroms): 2 millis pass2 - checking and writing primary data (15253 records, 4 fields): 14 millis CompletedMACS2peakCalling INFO @ Tue, 14 Jul 2020 10:29:25: 28000000 INFO @ Tue, 14 Jul 2020 10:29:30: 29000000 INFO @ Tue, 14 Jul 2020 10:29:35: 30000000 INFO @ Tue, 14 Jul 2020 10:29:39: #1 tag size is determined as 74 bps INFO @ Tue, 14 Jul 2020 10:29:39: #1 tag size = 74 INFO @ Tue, 14 Jul 2020 10:29:39: #1 total tags in treatment: 14827906 INFO @ Tue, 14 Jul 2020 10:29:39: #1 user defined the maximum tags... INFO @ Tue, 14 Jul 2020 10:29:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 14 Jul 2020 10:29:39: #1 tags after filtering in treatment: 13589100 INFO @ Tue, 14 Jul 2020 10:29:39: #1 Redundant rate of treatment: 0.08 INFO @ Tue, 14 Jul 2020 10:29:39: #1 finished! INFO @ Tue, 14 Jul 2020 10:29:39: #2 Build Peak Model... INFO @ Tue, 14 Jul 2020 10:29:39: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 14 Jul 2020 10:29:40: #2 number of paired peaks: 497 WARNING @ Tue, 14 Jul 2020 10:29:40: Fewer paired peaks (497) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 497 pairs to build model! INFO @ Tue, 14 Jul 2020 10:29:40: start model_add_line... INFO @ Tue, 14 Jul 2020 10:29:40: start X-correlation... INFO @ Tue, 14 Jul 2020 10:29:40: end of X-cor INFO @ Tue, 14 Jul 2020 10:29:40: #2 finished! INFO @ Tue, 14 Jul 2020 10:29:40: #2 predicted fragment length is 179 bps INFO @ Tue, 14 Jul 2020 10:29:40: #2 alternative fragment length(s) may be 179 bps INFO @ Tue, 14 Jul 2020 10:29:40: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.20_model.r INFO @ Tue, 14 Jul 2020 10:29:40: #3 Call peaks... INFO @ Tue, 14 Jul 2020 10:29:40: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 14 Jul 2020 10:29:41: #3 Call peaks for each chromosome... INFO @ Tue, 14 Jul 2020 10:29:56: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.10_peaks.xls INFO @ Tue, 14 Jul 2020 10:29:56: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.10_peaks.narrowPeak INFO @ Tue, 14 Jul 2020 10:29:56: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.10_summits.bed INFO @ Tue, 14 Jul 2020 10:29:56: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (6296 records, 4 fields): 7 millis CompletedMACS2peakCalling BigWig に変換しました。 INFO @ Tue, 14 Jul 2020 10:30:10: #3 Call peaks for each chromosome... INFO @ Tue, 14 Jul 2020 10:30:25: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.20_peaks.xls INFO @ Tue, 14 Jul 2020 10:30:25: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.20_peaks.narrowPeak INFO @ Tue, 14 Jul 2020 10:30:25: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX8156232/SRX8156232.20_summits.bed INFO @ Tue, 14 Jul 2020 10:30:25: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (1731 records, 4 fields): 9 millis CompletedMACS2peakCalling