Job ID = 6626991 SRX = SRX7975014 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-07-14T00:12:12 prefetch.2.10.7: 1) Downloading 'SRR11396265'... 2020-07-14T00:12:12 prefetch.2.10.7: Downloading via HTTPS... 2020-07-14T00:37:16 prefetch.2.10.7: HTTPS download failed 2020-07-14T00:37:16 prefetch.2.10.7: 1) failed to download SRR11396265 2020-07-14T00:37:26 prefetch.2.10.7: 1) Downloading 'SRR11396265'... 2020-07-14T00:37:26 prefetch.2.10.7: Downloading via HTTPS... 2020-07-14T00:37:26 prefetch.2.10.7: Continue download of 'SRR11396265' from 3275339484 2020-07-14T00:37:31 prefetch.2.10.7: HTTPS download succeed 2020-07-14T00:37:31 prefetch.2.10.7: 1) 'SRR11396265' was downloaded successfully 2020-07-14T00:37:31 prefetch.2.10.7: 'SRR11396265' has 0 unresolved dependencies Read 42953209 spots for SRR11396265/SRR11396265.sra Written 42953209 spots for SRR11396265/SRR11396265.sra fastq に変換しました。 bowtie でマッピング中... Your job 6627590 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:47:43 42953209 reads; of these: 42953209 (100.00%) were paired; of these: 23745192 (55.28%) aligned concordantly 0 times 13303263 (30.97%) aligned concordantly exactly 1 time 5904754 (13.75%) aligned concordantly >1 times ---- 23745192 pairs aligned concordantly 0 times; of these: 2782743 (11.72%) aligned discordantly 1 time ---- 20962449 pairs aligned 0 times concordantly or discordantly; of these: 41924898 mates make up the pairs; of these: 37833696 (90.24%) aligned 0 times 1208533 (2.88%) aligned exactly 1 time 2882669 (6.88%) aligned >1 times 55.96% overall alignment rate Time searching: 01:47:43 Overall time: 01:47:43 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 6410228 / 21960535 = 0.2919 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 14 Jul 2020 11:45:10: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 14 Jul 2020 11:45:10: #1 read tag files... INFO @ Tue, 14 Jul 2020 11:45:10: #1 read treatment tags... INFO @ Tue, 14 Jul 2020 11:45:17: 1000000 INFO @ Tue, 14 Jul 2020 11:45:24: 2000000 INFO @ Tue, 14 Jul 2020 11:45:31: 3000000 INFO @ Tue, 14 Jul 2020 11:45:37: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 14 Jul 2020 11:45:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 14 Jul 2020 11:45:40: #1 read tag files... INFO @ Tue, 14 Jul 2020 11:45:40: #1 read treatment tags... INFO @ Tue, 14 Jul 2020 11:45:44: 5000000 INFO @ Tue, 14 Jul 2020 11:45:47: 1000000 INFO @ Tue, 14 Jul 2020 11:45:51: 6000000 INFO @ Tue, 14 Jul 2020 11:45:55: 2000000 INFO @ Tue, 14 Jul 2020 11:45:58: 7000000 INFO @ Tue, 14 Jul 2020 11:46:02: 3000000 INFO @ Tue, 14 Jul 2020 11:46:05: 8000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Tue, 14 Jul 2020 11:46:09: 4000000 INFO @ Tue, 14 Jul 2020 11:46:10: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Tue, 14 Jul 2020 11:46:10: #1 read tag files... INFO @ Tue, 14 Jul 2020 11:46:10: #1 read treatment tags... INFO @ Tue, 14 Jul 2020 11:46:12: 9000000 INFO @ Tue, 14 Jul 2020 11:46:16: 5000000 INFO @ Tue, 14 Jul 2020 11:46:18: 1000000 INFO @ Tue, 14 Jul 2020 11:46:20: 10000000 INFO @ Tue, 14 Jul 2020 11:46:23: 6000000 INFO @ Tue, 14 Jul 2020 11:46:26: 2000000 INFO @ Tue, 14 Jul 2020 11:46:27: 11000000 INFO @ Tue, 14 Jul 2020 11:46:31: 7000000 INFO @ Tue, 14 Jul 2020 11:46:33: 3000000 INFO @ Tue, 14 Jul 2020 11:46:34: 12000000 INFO @ Tue, 14 Jul 2020 11:46:38: 8000000 INFO @ Tue, 14 Jul 2020 11:46:41: 4000000 INFO @ Tue, 14 Jul 2020 11:46:41: 13000000 INFO @ Tue, 14 Jul 2020 11:46:45: 9000000 INFO @ Tue, 14 Jul 2020 11:46:48: 14000000 INFO @ Tue, 14 Jul 2020 11:46:49: 5000000 INFO @ Tue, 14 Jul 2020 11:46:53: 10000000 INFO @ Tue, 14 Jul 2020 11:46:55: 15000000 INFO @ Tue, 14 Jul 2020 11:46:56: 6000000 INFO @ Tue, 14 Jul 2020 11:47:00: 11000000 INFO @ Tue, 14 Jul 2020 11:47:02: 16000000 INFO @ Tue, 14 Jul 2020 11:47:04: 7000000 INFO @ Tue, 14 Jul 2020 11:47:07: 12000000 INFO @ Tue, 14 Jul 2020 11:47:09: 17000000 INFO @ Tue, 14 Jul 2020 11:47:12: 8000000 INFO @ Tue, 14 Jul 2020 11:47:15: 13000000 INFO @ Tue, 14 Jul 2020 11:47:16: 18000000 INFO @ Tue, 14 Jul 2020 11:47:19: 9000000 INFO @ Tue, 14 Jul 2020 11:47:22: 14000000 INFO @ Tue, 14 Jul 2020 11:47:23: 19000000 INFO @ Tue, 14 Jul 2020 11:47:27: 10000000 INFO @ Tue, 14 Jul 2020 11:47:30: 15000000 INFO @ Tue, 14 Jul 2020 11:47:30: 20000000 INFO @ Tue, 14 Jul 2020 11:47:35: 11000000 INFO @ Tue, 14 Jul 2020 11:47:37: 16000000 INFO @ Tue, 14 Jul 2020 11:47:38: 21000000 INFO @ Tue, 14 Jul 2020 11:47:42: 12000000 INFO @ Tue, 14 Jul 2020 11:47:44: 17000000 INFO @ Tue, 14 Jul 2020 11:47:45: 22000000 INFO @ Tue, 14 Jul 2020 11:47:50: 13000000 INFO @ Tue, 14 Jul 2020 11:47:51: 18000000 INFO @ Tue, 14 Jul 2020 11:47:52: 23000000 INFO @ Tue, 14 Jul 2020 11:47:57: 14000000 INFO @ Tue, 14 Jul 2020 11:47:58: 19000000 INFO @ Tue, 14 Jul 2020 11:47:59: 24000000 INFO @ Tue, 14 Jul 2020 11:48:05: 20000000 INFO @ Tue, 14 Jul 2020 11:48:05: 15000000 INFO @ Tue, 14 Jul 2020 11:48:06: 25000000 INFO @ Tue, 14 Jul 2020 11:48:12: 21000000 INFO @ Tue, 14 Jul 2020 11:48:12: 16000000 INFO @ Tue, 14 Jul 2020 11:48:13: 26000000 INFO @ Tue, 14 Jul 2020 11:48:19: 22000000 INFO @ Tue, 14 Jul 2020 11:48:20: 17000000 INFO @ Tue, 14 Jul 2020 11:48:20: 27000000 INFO @ Tue, 14 Jul 2020 11:48:26: 23000000 INFO @ Tue, 14 Jul 2020 11:48:27: 18000000 INFO @ Tue, 14 Jul 2020 11:48:27: 28000000 INFO @ Tue, 14 Jul 2020 11:48:33: 24000000 INFO @ Tue, 14 Jul 2020 11:48:34: 29000000 INFO @ Tue, 14 Jul 2020 11:48:34: 19000000 INFO @ Tue, 14 Jul 2020 11:48:40: 25000000 INFO @ Tue, 14 Jul 2020 11:48:41: 30000000 INFO @ Tue, 14 Jul 2020 11:48:42: 20000000 INFO @ Tue, 14 Jul 2020 11:48:48: 26000000 INFO @ Tue, 14 Jul 2020 11:48:49: 31000000 INFO @ Tue, 14 Jul 2020 11:48:50: 21000000 INFO @ Tue, 14 Jul 2020 11:48:55: 27000000 INFO @ Tue, 14 Jul 2020 11:48:56: 32000000 INFO @ Tue, 14 Jul 2020 11:48:57: 22000000 INFO @ Tue, 14 Jul 2020 11:49:02: 28000000 INFO @ Tue, 14 Jul 2020 11:49:03: 33000000 INFO @ Tue, 14 Jul 2020 11:49:05: 23000000 INFO @ Tue, 14 Jul 2020 11:49:09: 29000000 INFO @ Tue, 14 Jul 2020 11:49:10: 34000000 INFO @ Tue, 14 Jul 2020 11:49:12: 24000000 INFO @ Tue, 14 Jul 2020 11:49:16: 30000000 INFO @ Tue, 14 Jul 2020 11:49:17: 35000000 INFO @ Tue, 14 Jul 2020 11:49:19: #1 tag size is determined as 100 bps INFO @ Tue, 14 Jul 2020 11:49:19: #1 tag size = 100 INFO @ Tue, 14 Jul 2020 11:49:19: #1 total tags in treatment: 13495753 INFO @ Tue, 14 Jul 2020 11:49:19: #1 user defined the maximum tags... INFO @ Tue, 14 Jul 2020 11:49:19: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 14 Jul 2020 11:49:19: #1 tags after filtering in treatment: 12381852 INFO @ Tue, 14 Jul 2020 11:49:19: #1 Redundant rate of treatment: 0.08 INFO @ Tue, 14 Jul 2020 11:49:19: #1 finished! INFO @ Tue, 14 Jul 2020 11:49:19: #2 Build Peak Model... INFO @ Tue, 14 Jul 2020 11:49:19: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 14 Jul 2020 11:49:20: 25000000 INFO @ Tue, 14 Jul 2020 11:49:20: #2 number of paired peaks: 270 WARNING @ Tue, 14 Jul 2020 11:49:20: Fewer paired peaks (270) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 270 pairs to build model! INFO @ Tue, 14 Jul 2020 11:49:20: start model_add_line... INFO @ Tue, 14 Jul 2020 11:49:20: start X-correlation... INFO @ Tue, 14 Jul 2020 11:49:20: end of X-cor INFO @ Tue, 14 Jul 2020 11:49:20: #2 finished! INFO @ Tue, 14 Jul 2020 11:49:20: #2 predicted fragment length is 162 bps INFO @ Tue, 14 Jul 2020 11:49:20: #2 alternative fragment length(s) may be 162 bps INFO @ Tue, 14 Jul 2020 11:49:20: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.05_model.r WARNING @ Tue, 14 Jul 2020 11:49:21: #2 Since the d (162) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 14 Jul 2020 11:49:21: #2 You may need to consider one of the other alternative d(s): 162 WARNING @ Tue, 14 Jul 2020 11:49:21: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 14 Jul 2020 11:49:21: #3 Call peaks... INFO @ Tue, 14 Jul 2020 11:49:21: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 14 Jul 2020 11:49:23: 31000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Tue, 14 Jul 2020 11:49:27: 26000000 INFO @ Tue, 14 Jul 2020 11:49:30: 32000000 INFO @ Tue, 14 Jul 2020 11:49:34: 27000000 INFO @ Tue, 14 Jul 2020 11:49:37: 33000000 INFO @ Tue, 14 Jul 2020 11:49:42: 28000000 INFO @ Tue, 14 Jul 2020 11:49:44: 34000000 INFO @ Tue, 14 Jul 2020 11:49:49: 29000000 INFO @ Tue, 14 Jul 2020 11:49:50: #3 Call peaks for each chromosome... INFO @ Tue, 14 Jul 2020 11:49:51: 35000000 INFO @ Tue, 14 Jul 2020 11:49:53: #1 tag size is determined as 100 bps INFO @ Tue, 14 Jul 2020 11:49:53: #1 tag size = 100 INFO @ Tue, 14 Jul 2020 11:49:53: #1 total tags in treatment: 13495753 INFO @ Tue, 14 Jul 2020 11:49:53: #1 user defined the maximum tags... INFO @ Tue, 14 Jul 2020 11:49:53: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 14 Jul 2020 11:49:53: #1 tags after filtering in treatment: 12381852 INFO @ Tue, 14 Jul 2020 11:49:53: #1 Redundant rate of treatment: 0.08 INFO @ Tue, 14 Jul 2020 11:49:53: #1 finished! INFO @ Tue, 14 Jul 2020 11:49:53: #2 Build Peak Model... INFO @ Tue, 14 Jul 2020 11:49:53: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 14 Jul 2020 11:49:54: #2 number of paired peaks: 270 WARNING @ Tue, 14 Jul 2020 11:49:54: Fewer paired peaks (270) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 270 pairs to build model! INFO @ Tue, 14 Jul 2020 11:49:54: start model_add_line... INFO @ Tue, 14 Jul 2020 11:49:54: start X-correlation... INFO @ Tue, 14 Jul 2020 11:49:54: end of X-cor INFO @ Tue, 14 Jul 2020 11:49:54: #2 finished! INFO @ Tue, 14 Jul 2020 11:49:54: #2 predicted fragment length is 162 bps INFO @ Tue, 14 Jul 2020 11:49:54: #2 alternative fragment length(s) may be 162 bps INFO @ Tue, 14 Jul 2020 11:49:54: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.10_model.r WARNING @ Tue, 14 Jul 2020 11:49:54: #2 Since the d (162) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 14 Jul 2020 11:49:54: #2 You may need to consider one of the other alternative d(s): 162 WARNING @ Tue, 14 Jul 2020 11:49:54: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 14 Jul 2020 11:49:54: #3 Call peaks... INFO @ Tue, 14 Jul 2020 11:49:54: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 14 Jul 2020 11:49:56: 30000000 INFO @ Tue, 14 Jul 2020 11:50:04: 31000000 INFO @ Tue, 14 Jul 2020 11:50:05: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.05_peaks.xls INFO @ Tue, 14 Jul 2020 11:50:05: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.05_peaks.narrowPeak INFO @ Tue, 14 Jul 2020 11:50:05: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.05_summits.bed INFO @ Tue, 14 Jul 2020 11:50:05: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (4532 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Tue, 14 Jul 2020 11:50:11: 32000000 INFO @ Tue, 14 Jul 2020 11:50:18: 33000000 INFO @ Tue, 14 Jul 2020 11:50:23: #3 Call peaks for each chromosome... INFO @ Tue, 14 Jul 2020 11:50:25: 34000000 INFO @ Tue, 14 Jul 2020 11:50:32: 35000000 INFO @ Tue, 14 Jul 2020 11:50:34: #1 tag size is determined as 100 bps INFO @ Tue, 14 Jul 2020 11:50:34: #1 tag size = 100 INFO @ Tue, 14 Jul 2020 11:50:34: #1 total tags in treatment: 13495753 INFO @ Tue, 14 Jul 2020 11:50:34: #1 user defined the maximum tags... INFO @ Tue, 14 Jul 2020 11:50:34: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Tue, 14 Jul 2020 11:50:34: #1 tags after filtering in treatment: 12381852 INFO @ Tue, 14 Jul 2020 11:50:34: #1 Redundant rate of treatment: 0.08 INFO @ Tue, 14 Jul 2020 11:50:34: #1 finished! INFO @ Tue, 14 Jul 2020 11:50:34: #2 Build Peak Model... INFO @ Tue, 14 Jul 2020 11:50:34: #2 looking for paired plus/minus strand peaks... INFO @ Tue, 14 Jul 2020 11:50:35: #2 number of paired peaks: 270 WARNING @ Tue, 14 Jul 2020 11:50:35: Fewer paired peaks (270) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 270 pairs to build model! INFO @ Tue, 14 Jul 2020 11:50:35: start model_add_line... INFO @ Tue, 14 Jul 2020 11:50:35: start X-correlation... INFO @ Tue, 14 Jul 2020 11:50:35: end of X-cor INFO @ Tue, 14 Jul 2020 11:50:35: #2 finished! INFO @ Tue, 14 Jul 2020 11:50:35: #2 predicted fragment length is 162 bps INFO @ Tue, 14 Jul 2020 11:50:35: #2 alternative fragment length(s) may be 162 bps INFO @ Tue, 14 Jul 2020 11:50:35: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.20_model.r WARNING @ Tue, 14 Jul 2020 11:50:35: #2 Since the d (162) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Tue, 14 Jul 2020 11:50:35: #2 You may need to consider one of the other alternative d(s): 162 WARNING @ Tue, 14 Jul 2020 11:50:35: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Tue, 14 Jul 2020 11:50:35: #3 Call peaks... INFO @ Tue, 14 Jul 2020 11:50:35: #3 Pre-compute pvalue-qvalue table... INFO @ Tue, 14 Jul 2020 11:50:38: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.10_peaks.xls INFO @ Tue, 14 Jul 2020 11:50:38: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.10_peaks.narrowPeak INFO @ Tue, 14 Jul 2020 11:50:38: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.10_summits.bed INFO @ Tue, 14 Jul 2020 11:50:38: Done! pass1 - making usageList (13 chroms): 1 millis pass2 - checking and writing primary data (2416 records, 4 fields): 5 millis CompletedMACS2peakCalling BigWig に変換しました。 INFO @ Tue, 14 Jul 2020 11:51:04: #3 Call peaks for each chromosome... INFO @ Tue, 14 Jul 2020 11:51:20: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.20_peaks.xls INFO @ Tue, 14 Jul 2020 11:51:20: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.20_peaks.narrowPeak INFO @ Tue, 14 Jul 2020 11:51:20: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7975014/SRX7975014.20_summits.bed INFO @ Tue, 14 Jul 2020 11:51:20: Done! pass1 - making usageList (13 chroms): 0 millis pass2 - checking and writing primary data (1029 records, 4 fields): 19 millis CompletedMACS2peakCalling