Job ID = 14172462 SRX = SRX7541441 Genome = dm3 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... Read 30293587 spots for SRR10871479/SRR10871479.sra Written 30293587 spots for SRR10871479/SRR10871479.sra fastq に変換しました。 bowtie でマッピング中... Your job 14173240 ("srTdm6") has been submitted Time loading reference: 00:00:00 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:35:39 30293587 reads; of these: 30293587 (100.00%) were paired; of these: 6509772 (21.49%) aligned concordantly 0 times 15703318 (51.84%) aligned concordantly exactly 1 time 8080497 (26.67%) aligned concordantly >1 times ---- 6509772 pairs aligned concordantly 0 times; of these: 425734 (6.54%) aligned discordantly 1 time ---- 6084038 pairs aligned 0 times concordantly or discordantly; of these: 12168076 mates make up the pairs; of these: 10707661 (88.00%) aligned 0 times 680096 (5.59%) aligned exactly 1 time 780319 (6.41%) aligned >1 times 82.33% overall alignment rate Time searching: 01:35:40 Overall time: 01:35:40 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 24 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 4658345 / 24004330 = 0.1941 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 17:24:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 17:24:33: #1 read tag files... INFO @ Sat, 11 Dec 2021 17:24:33: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 17:24:39: 1000000 INFO @ Sat, 11 Dec 2021 17:24:45: 2000000 INFO @ Sat, 11 Dec 2021 17:24:52: 3000000 INFO @ Sat, 11 Dec 2021 17:24:58: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 17:25:03: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 17:25:03: #1 read tag files... INFO @ Sat, 11 Dec 2021 17:25:03: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 17:25:04: 5000000 INFO @ Sat, 11 Dec 2021 17:25:09: 1000000 INFO @ Sat, 11 Dec 2021 17:25:10: 6000000 INFO @ Sat, 11 Dec 2021 17:25:16: 2000000 INFO @ Sat, 11 Dec 2021 17:25:17: 7000000 INFO @ Sat, 11 Dec 2021 17:25:23: 3000000 INFO @ Sat, 11 Dec 2021 17:25:23: 8000000 INFO @ Sat, 11 Dec 2021 17:25:29: 4000000 INFO @ Sat, 11 Dec 2021 17:25:30: 9000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.8.3/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Sat, 11 Dec 2021 17:25:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Dec 2021 17:25:33: #1 read tag files... INFO @ Sat, 11 Dec 2021 17:25:33: #1 read treatment tags... INFO @ Sat, 11 Dec 2021 17:25:36: 10000000 INFO @ Sat, 11 Dec 2021 17:25:36: 5000000 INFO @ Sat, 11 Dec 2021 17:25:40: 1000000 INFO @ Sat, 11 Dec 2021 17:25:43: 11000000 INFO @ Sat, 11 Dec 2021 17:25:43: 6000000 INFO @ Sat, 11 Dec 2021 17:25:46: 2000000 INFO @ Sat, 11 Dec 2021 17:25:49: 7000000 INFO @ Sat, 11 Dec 2021 17:25:49: 12000000 INFO @ Sat, 11 Dec 2021 17:25:53: 3000000 INFO @ Sat, 11 Dec 2021 17:25:56: 8000000 INFO @ Sat, 11 Dec 2021 17:25:56: 13000000 INFO @ Sat, 11 Dec 2021 17:26:00: 4000000 INFO @ Sat, 11 Dec 2021 17:26:02: 9000000 INFO @ Sat, 11 Dec 2021 17:26:03: 14000000 INFO @ Sat, 11 Dec 2021 17:26:07: 5000000 INFO @ Sat, 11 Dec 2021 17:26:09: 10000000 INFO @ Sat, 11 Dec 2021 17:26:10: 15000000 INFO @ Sat, 11 Dec 2021 17:26:13: 6000000 INFO @ Sat, 11 Dec 2021 17:26:15: 11000000 INFO @ Sat, 11 Dec 2021 17:26:17: 16000000 INFO @ Sat, 11 Dec 2021 17:26:20: 7000000 INFO @ Sat, 11 Dec 2021 17:26:21: 12000000 INFO @ Sat, 11 Dec 2021 17:26:24: 17000000 INFO @ Sat, 11 Dec 2021 17:26:27: 8000000 INFO @ Sat, 11 Dec 2021 17:26:28: 13000000 INFO @ Sat, 11 Dec 2021 17:26:30: 18000000 INFO @ Sat, 11 Dec 2021 17:26:34: 9000000 INFO @ Sat, 11 Dec 2021 17:26:34: 14000000 INFO @ Sat, 11 Dec 2021 17:26:37: 19000000 INFO @ Sat, 11 Dec 2021 17:26:41: 15000000 INFO @ Sat, 11 Dec 2021 17:26:41: 10000000 INFO @ Sat, 11 Dec 2021 17:26:44: 20000000 INFO @ Sat, 11 Dec 2021 17:26:47: 11000000 INFO @ Sat, 11 Dec 2021 17:26:47: 16000000 INFO @ Sat, 11 Dec 2021 17:26:51: 21000000 INFO @ Sat, 11 Dec 2021 17:26:54: 12000000 INFO @ Sat, 11 Dec 2021 17:26:54: 17000000 INFO @ Sat, 11 Dec 2021 17:26:58: 22000000 INFO @ Sat, 11 Dec 2021 17:27:00: 13000000 INFO @ Sat, 11 Dec 2021 17:27:01: 18000000 INFO @ Sat, 11 Dec 2021 17:27:04: 23000000 INFO @ Sat, 11 Dec 2021 17:27:07: 14000000 INFO @ Sat, 11 Dec 2021 17:27:07: 19000000 INFO @ Sat, 11 Dec 2021 17:27:11: 24000000 INFO @ Sat, 11 Dec 2021 17:27:14: 20000000 INFO @ Sat, 11 Dec 2021 17:27:14: 15000000 INFO @ Sat, 11 Dec 2021 17:27:18: 25000000 INFO @ Sat, 11 Dec 2021 17:27:21: 21000000 INFO @ Sat, 11 Dec 2021 17:27:21: 16000000 INFO @ Sat, 11 Dec 2021 17:27:25: 26000000 INFO @ Sat, 11 Dec 2021 17:27:27: 22000000 INFO @ Sat, 11 Dec 2021 17:27:27: 17000000 INFO @ Sat, 11 Dec 2021 17:27:32: 27000000 INFO @ Sat, 11 Dec 2021 17:27:34: 23000000 INFO @ Sat, 11 Dec 2021 17:27:34: 18000000 INFO @ Sat, 11 Dec 2021 17:27:38: 28000000 INFO @ Sat, 11 Dec 2021 17:27:40: 24000000 INFO @ Sat, 11 Dec 2021 17:27:41: 19000000 INFO @ Sat, 11 Dec 2021 17:27:45: 29000000 INFO @ Sat, 11 Dec 2021 17:27:47: 25000000 INFO @ Sat, 11 Dec 2021 17:27:47: 20000000 INFO @ Sat, 11 Dec 2021 17:27:52: 30000000 INFO @ Sat, 11 Dec 2021 17:27:54: 26000000 INFO @ Sat, 11 Dec 2021 17:27:54: 21000000 INFO @ Sat, 11 Dec 2021 17:27:59: 31000000 INFO @ Sat, 11 Dec 2021 17:28:00: 27000000 INFO @ Sat, 11 Dec 2021 17:28:01: 22000000 INFO @ Sat, 11 Dec 2021 17:28:05: 32000000 INFO @ Sat, 11 Dec 2021 17:28:07: 28000000 INFO @ Sat, 11 Dec 2021 17:28:08: 23000000 INFO @ Sat, 11 Dec 2021 17:28:12: 33000000 INFO @ Sat, 11 Dec 2021 17:28:14: 29000000 INFO @ Sat, 11 Dec 2021 17:28:14: 24000000 INFO @ Sat, 11 Dec 2021 17:28:19: 34000000 INFO @ Sat, 11 Dec 2021 17:28:20: 30000000 INFO @ Sat, 11 Dec 2021 17:28:21: 25000000 INFO @ Sat, 11 Dec 2021 17:28:26: 35000000 INFO @ Sat, 11 Dec 2021 17:28:27: 31000000 INFO @ Sat, 11 Dec 2021 17:28:28: 26000000 INFO @ Sat, 11 Dec 2021 17:28:33: 36000000 INFO @ Sat, 11 Dec 2021 17:28:33: 32000000 INFO @ Sat, 11 Dec 2021 17:28:35: 27000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Sat, 11 Dec 2021 17:28:39: 37000000 INFO @ Sat, 11 Dec 2021 17:28:40: 33000000 INFO @ Sat, 11 Dec 2021 17:28:41: 28000000 INFO @ Sat, 11 Dec 2021 17:28:46: 38000000 INFO @ Sat, 11 Dec 2021 17:28:46: 34000000 INFO @ Sat, 11 Dec 2021 17:28:48: 29000000 INFO @ Sat, 11 Dec 2021 17:28:53: 39000000 INFO @ Sat, 11 Dec 2021 17:28:53: 35000000 INFO @ Sat, 11 Dec 2021 17:28:55: 30000000 INFO @ Sat, 11 Dec 2021 17:28:59: 40000000 INFO @ Sat, 11 Dec 2021 17:29:00: 36000000 INFO @ Sat, 11 Dec 2021 17:29:01: 31000000 INFO @ Sat, 11 Dec 2021 17:29:03: #1 tag size is determined as 101 bps INFO @ Sat, 11 Dec 2021 17:29:03: #1 tag size = 101 INFO @ Sat, 11 Dec 2021 17:29:03: #1 total tags in treatment: 19158589 INFO @ Sat, 11 Dec 2021 17:29:03: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 17:29:03: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 17:29:03: #1 tags after filtering in treatment: 15606389 INFO @ Sat, 11 Dec 2021 17:29:03: #1 Redundant rate of treatment: 0.19 INFO @ Sat, 11 Dec 2021 17:29:03: #1 finished! INFO @ Sat, 11 Dec 2021 17:29:03: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 17:29:03: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 17:29:04: #2 number of paired peaks: 104 WARNING @ Sat, 11 Dec 2021 17:29:04: Fewer paired peaks (104) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 104 pairs to build model! INFO @ Sat, 11 Dec 2021 17:29:04: start model_add_line... INFO @ Sat, 11 Dec 2021 17:29:04: start X-correlation... INFO @ Sat, 11 Dec 2021 17:29:04: end of X-cor INFO @ Sat, 11 Dec 2021 17:29:04: #2 finished! INFO @ Sat, 11 Dec 2021 17:29:04: #2 predicted fragment length is 129 bps INFO @ Sat, 11 Dec 2021 17:29:04: #2 alternative fragment length(s) may be 129 bps INFO @ Sat, 11 Dec 2021 17:29:04: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.05_model.r WARNING @ Sat, 11 Dec 2021 17:29:04: #2 Since the d (129) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 17:29:04: #2 You may need to consider one of the other alternative d(s): 129 WARNING @ Sat, 11 Dec 2021 17:29:04: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 17:29:04: #3 Call peaks... INFO @ Sat, 11 Dec 2021 17:29:04: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 17:29:06: 37000000 INFO @ Sat, 11 Dec 2021 17:29:08: 32000000 INFO @ Sat, 11 Dec 2021 17:29:13: 38000000 INFO @ Sat, 11 Dec 2021 17:29:14: 33000000 INFO @ Sat, 11 Dec 2021 17:29:19: 39000000 INFO @ Sat, 11 Dec 2021 17:29:21: 34000000 INFO @ Sat, 11 Dec 2021 17:29:26: 40000000 INFO @ Sat, 11 Dec 2021 17:29:28: 35000000 INFO @ Sat, 11 Dec 2021 17:29:30: #1 tag size is determined as 101 bps INFO @ Sat, 11 Dec 2021 17:29:30: #1 tag size = 101 INFO @ Sat, 11 Dec 2021 17:29:30: #1 total tags in treatment: 19158589 INFO @ Sat, 11 Dec 2021 17:29:30: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 17:29:30: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 17:29:30: #1 tags after filtering in treatment: 15606389 INFO @ Sat, 11 Dec 2021 17:29:30: #1 Redundant rate of treatment: 0.19 INFO @ Sat, 11 Dec 2021 17:29:30: #1 finished! INFO @ Sat, 11 Dec 2021 17:29:30: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 17:29:30: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 17:29:31: #2 number of paired peaks: 104 WARNING @ Sat, 11 Dec 2021 17:29:31: Fewer paired peaks (104) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 104 pairs to build model! INFO @ Sat, 11 Dec 2021 17:29:31: start model_add_line... INFO @ Sat, 11 Dec 2021 17:29:31: start X-correlation... INFO @ Sat, 11 Dec 2021 17:29:31: end of X-cor INFO @ Sat, 11 Dec 2021 17:29:31: #2 finished! INFO @ Sat, 11 Dec 2021 17:29:31: #2 predicted fragment length is 129 bps INFO @ Sat, 11 Dec 2021 17:29:31: #2 alternative fragment length(s) may be 129 bps INFO @ Sat, 11 Dec 2021 17:29:31: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.10_model.r WARNING @ Sat, 11 Dec 2021 17:29:31: #2 Since the d (129) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 17:29:31: #2 You may need to consider one of the other alternative d(s): 129 WARNING @ Sat, 11 Dec 2021 17:29:31: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 17:29:31: #3 Call peaks... INFO @ Sat, 11 Dec 2021 17:29:31: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 17:29:33: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 17:29:34: 36000000 INFO @ Sat, 11 Dec 2021 17:29:41: 37000000 BigWig に変換しました。 INFO @ Sat, 11 Dec 2021 17:29:47: 38000000 INFO @ Sat, 11 Dec 2021 17:29:48: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.05_peaks.xls INFO @ Sat, 11 Dec 2021 17:29:48: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.05_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 17:29:48: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.05_summits.bed INFO @ Sat, 11 Dec 2021 17:29:48: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3942 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 17:29:54: 39000000 INFO @ Sat, 11 Dec 2021 17:30:00: 40000000 INFO @ Sat, 11 Dec 2021 17:30:00: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 17:30:04: #1 tag size is determined as 101 bps INFO @ Sat, 11 Dec 2021 17:30:04: #1 tag size = 101 INFO @ Sat, 11 Dec 2021 17:30:04: #1 total tags in treatment: 19158589 INFO @ Sat, 11 Dec 2021 17:30:04: #1 user defined the maximum tags... INFO @ Sat, 11 Dec 2021 17:30:04: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Dec 2021 17:30:04: #1 tags after filtering in treatment: 15606389 INFO @ Sat, 11 Dec 2021 17:30:04: #1 Redundant rate of treatment: 0.19 INFO @ Sat, 11 Dec 2021 17:30:04: #1 finished! INFO @ Sat, 11 Dec 2021 17:30:04: #2 Build Peak Model... INFO @ Sat, 11 Dec 2021 17:30:04: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Dec 2021 17:30:05: #2 number of paired peaks: 104 WARNING @ Sat, 11 Dec 2021 17:30:05: Fewer paired peaks (104) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 104 pairs to build model! INFO @ Sat, 11 Dec 2021 17:30:05: start model_add_line... INFO @ Sat, 11 Dec 2021 17:30:05: start X-correlation... INFO @ Sat, 11 Dec 2021 17:30:05: end of X-cor INFO @ Sat, 11 Dec 2021 17:30:05: #2 finished! INFO @ Sat, 11 Dec 2021 17:30:05: #2 predicted fragment length is 129 bps INFO @ Sat, 11 Dec 2021 17:30:05: #2 alternative fragment length(s) may be 129 bps INFO @ Sat, 11 Dec 2021 17:30:05: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.20_model.r WARNING @ Sat, 11 Dec 2021 17:30:05: #2 Since the d (129) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Dec 2021 17:30:05: #2 You may need to consider one of the other alternative d(s): 129 WARNING @ Sat, 11 Dec 2021 17:30:05: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Dec 2021 17:30:05: #3 Call peaks... INFO @ Sat, 11 Dec 2021 17:30:05: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Dec 2021 17:30:15: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.10_peaks.xls INFO @ Sat, 11 Dec 2021 17:30:15: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.10_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 17:30:15: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.10_summits.bed INFO @ Sat, 11 Dec 2021 17:30:15: Done! pass1 - making usageList (14 chroms): 1 millis pass2 - checking and writing primary data (1614 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sat, 11 Dec 2021 17:30:33: #3 Call peaks for each chromosome... INFO @ Sat, 11 Dec 2021 17:30:48: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.20_peaks.xls INFO @ Sat, 11 Dec 2021 17:30:48: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.20_peaks.narrowPeak INFO @ Sat, 11 Dec 2021 17:30:48: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX7541441/SRX7541441.20_summits.bed INFO @ Sat, 11 Dec 2021 17:30:48: Done! pass1 - making usageList (8 chroms): 1 millis pass2 - checking and writing primary data (623 records, 4 fields): 1 millis CompletedMACS2peakCalling