Job ID = 5721218 sra ファイルのダウンロード中... Read layout: PAIRED fastq に変換中... 2020-04-15T21:09:17 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T21:09:39 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T21:09:39 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T21:09:39 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T21:11:06 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2020-04-15T21:11:06 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 24,426,675 reads read : 48,853,350 reads written : 48,853,350 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 01:10:56 24426675 reads; of these: 24426675 (100.00%) were paired; of these: 1929142 (7.90%) aligned concordantly 0 times 15685570 (64.21%) aligned concordantly exactly 1 time 6811963 (27.89%) aligned concordantly >1 times ---- 1929142 pairs aligned concordantly 0 times; of these: 740709 (38.40%) aligned discordantly 1 time ---- 1188433 pairs aligned 0 times concordantly or discordantly; of these: 2376866 mates make up the pairs; of these: 1226129 (51.59%) aligned 0 times 442641 (18.62%) aligned exactly 1 time 708096 (29.79%) aligned >1 times 97.49% overall alignment rate Time searching: 01:10:56 Overall time: 01:10:56 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 15 sequences. [bam_sort_core] merging from 20 files... [bam_rmdup_core] processing reference chr2L... [bam_rmdup_core] processing reference chr2LHet... [bam_rmdup_core] processing reference chr2R... [bam_rmdup_core] processing reference chr2RHet... [bam_rmdup_core] processing reference chr3L... [bam_rmdup_core] processing reference chr3LHet... [bam_rmdup_core] processing reference chr3R... [bam_rmdup_core] processing reference chr3RHet... [bam_rmdup_core] processing reference chr4... [bam_rmdup_core] processing reference chrM... [bam_rmdup_core] processing reference chrU... [bam_rmdup_core] processing reference chrUextra... [bam_rmdup_core] processing reference chrX... [bam_rmdup_core] processing reference chrXHet... [bam_rmdup_core] processing reference chrYHet... [bam_rmdup_core] 3276737 / 23104022 = 0.1418 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 07:38:05: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 07:38:05: #1 read tag files... INFO @ Thu, 16 Apr 2020 07:38:05: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 07:38:12: 1000000 INFO @ Thu, 16 Apr 2020 07:38:18: 2000000 INFO @ Thu, 16 Apr 2020 07:38:24: 3000000 INFO @ Thu, 16 Apr 2020 07:38:30: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 07:38:35: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 07:38:35: #1 read tag files... INFO @ Thu, 16 Apr 2020 07:38:35: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 07:38:36: 5000000 INFO @ Thu, 16 Apr 2020 07:38:42: 1000000 INFO @ Thu, 16 Apr 2020 07:38:43: 6000000 INFO @ Thu, 16 Apr 2020 07:38:48: 2000000 INFO @ Thu, 16 Apr 2020 07:38:49: 7000000 INFO @ Thu, 16 Apr 2020 07:38:55: 3000000 INFO @ Thu, 16 Apr 2020 07:38:55: 8000000 INFO @ Thu, 16 Apr 2020 07:39:01: 4000000 INFO @ Thu, 16 Apr 2020 07:39:02: 9000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Thu, 16 Apr 2020 07:39:05: # Command line: callpeak -t /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.bam -f BAM -g dm -n /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.bam'] # control file = None # effective genome size = 1.20e+08 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Thu, 16 Apr 2020 07:39:05: #1 read tag files... INFO @ Thu, 16 Apr 2020 07:39:05: #1 read treatment tags... INFO @ Thu, 16 Apr 2020 07:39:08: 5000000 INFO @ Thu, 16 Apr 2020 07:39:09: 10000000 INFO @ Thu, 16 Apr 2020 07:39:11: 1000000 INFO @ Thu, 16 Apr 2020 07:39:15: 6000000 INFO @ Thu, 16 Apr 2020 07:39:15: 11000000 INFO @ Thu, 16 Apr 2020 07:39:16: 2000000 INFO @ Thu, 16 Apr 2020 07:39:21: 7000000 INFO @ Thu, 16 Apr 2020 07:39:22: 3000000 INFO @ Thu, 16 Apr 2020 07:39:22: 12000000 INFO @ Thu, 16 Apr 2020 07:39:27: 4000000 INFO @ Thu, 16 Apr 2020 07:39:28: 8000000 INFO @ Thu, 16 Apr 2020 07:39:29: 13000000 INFO @ Thu, 16 Apr 2020 07:39:33: 5000000 INFO @ Thu, 16 Apr 2020 07:39:35: 9000000 INFO @ Thu, 16 Apr 2020 07:39:36: 14000000 INFO @ Thu, 16 Apr 2020 07:39:38: 6000000 INFO @ Thu, 16 Apr 2020 07:39:41: 10000000 INFO @ Thu, 16 Apr 2020 07:39:42: 15000000 INFO @ Thu, 16 Apr 2020 07:39:44: 7000000 INFO @ Thu, 16 Apr 2020 07:39:47: 11000000 INFO @ Thu, 16 Apr 2020 07:39:49: 16000000 INFO @ Thu, 16 Apr 2020 07:39:50: 8000000 INFO @ Thu, 16 Apr 2020 07:39:54: 12000000 INFO @ Thu, 16 Apr 2020 07:39:55: 9000000 INFO @ Thu, 16 Apr 2020 07:39:56: 17000000 INFO @ Thu, 16 Apr 2020 07:40:01: 10000000 INFO @ Thu, 16 Apr 2020 07:40:01: 13000000 INFO @ Thu, 16 Apr 2020 07:40:03: 18000000 INFO @ Thu, 16 Apr 2020 07:40:06: 11000000 INFO @ Thu, 16 Apr 2020 07:40:08: 14000000 INFO @ Thu, 16 Apr 2020 07:40:10: 19000000 INFO @ Thu, 16 Apr 2020 07:40:12: 12000000 INFO @ Thu, 16 Apr 2020 07:40:14: 15000000 INFO @ Thu, 16 Apr 2020 07:40:17: 20000000 INFO @ Thu, 16 Apr 2020 07:40:17: 13000000 INFO @ Thu, 16 Apr 2020 07:40:21: 16000000 INFO @ Thu, 16 Apr 2020 07:40:23: 14000000 INFO @ Thu, 16 Apr 2020 07:40:23: 21000000 INFO @ Thu, 16 Apr 2020 07:40:28: 17000000 INFO @ Thu, 16 Apr 2020 07:40:28: 15000000 INFO @ Thu, 16 Apr 2020 07:40:30: 22000000 INFO @ Thu, 16 Apr 2020 07:40:34: 16000000 INFO @ Thu, 16 Apr 2020 07:40:34: 18000000 INFO @ Thu, 16 Apr 2020 07:40:37: 23000000 INFO @ Thu, 16 Apr 2020 07:40:40: 17000000 INFO @ Thu, 16 Apr 2020 07:40:40: 19000000 INFO @ Thu, 16 Apr 2020 07:40:43: 24000000 INFO @ Thu, 16 Apr 2020 07:40:45: 18000000 INFO @ Thu, 16 Apr 2020 07:40:47: 20000000 INFO @ Thu, 16 Apr 2020 07:40:50: 25000000 INFO @ Thu, 16 Apr 2020 07:40:51: 19000000 INFO @ Thu, 16 Apr 2020 07:40:53: 21000000 INFO @ Thu, 16 Apr 2020 07:40:56: 20000000 INFO @ Thu, 16 Apr 2020 07:40:56: 26000000 INFO @ Thu, 16 Apr 2020 07:40:59: 22000000 INFO @ Thu, 16 Apr 2020 07:41:02: 21000000 INFO @ Thu, 16 Apr 2020 07:41:03: 27000000 INFO @ Thu, 16 Apr 2020 07:41:06: 23000000 INFO @ Thu, 16 Apr 2020 07:41:07: 22000000 INFO @ Thu, 16 Apr 2020 07:41:10: 28000000 INFO @ Thu, 16 Apr 2020 07:41:12: 24000000 INFO @ Thu, 16 Apr 2020 07:41:13: 23000000 INFO @ Thu, 16 Apr 2020 07:41:16: 29000000 INFO @ Thu, 16 Apr 2020 07:41:18: 24000000 INFO @ Thu, 16 Apr 2020 07:41:18: 25000000 INFO @ Thu, 16 Apr 2020 07:41:23: 30000000 INFO @ Thu, 16 Apr 2020 07:41:24: 25000000 INFO @ Thu, 16 Apr 2020 07:41:25: 26000000 INFO @ Thu, 16 Apr 2020 07:41:29: 26000000 INFO @ Thu, 16 Apr 2020 07:41:29: 31000000 INFO @ Thu, 16 Apr 2020 07:41:31: 27000000 INFO @ Thu, 16 Apr 2020 07:41:35: 27000000 INFO @ Thu, 16 Apr 2020 07:41:36: 32000000 INFO @ Thu, 16 Apr 2020 07:41:37: 28000000 INFO @ Thu, 16 Apr 2020 07:41:40: 28000000 INFO @ Thu, 16 Apr 2020 07:41:43: 33000000 INFO @ Thu, 16 Apr 2020 07:41:44: 29000000 INFO @ Thu, 16 Apr 2020 07:41:46: 29000000 INFO @ Thu, 16 Apr 2020 07:41:49: 34000000 INFO @ Thu, 16 Apr 2020 07:41:50: 30000000 INFO @ Thu, 16 Apr 2020 07:41:52: 30000000 INFO @ Thu, 16 Apr 2020 07:41:56: 35000000 INFO @ Thu, 16 Apr 2020 07:41:57: 31000000 INFO @ Thu, 16 Apr 2020 07:41:58: 31000000 INFO @ Thu, 16 Apr 2020 07:42:03: 36000000 INFO @ Thu, 16 Apr 2020 07:42:03: 32000000 INFO @ Thu, 16 Apr 2020 07:42:04: 32000000 INFO @ Thu, 16 Apr 2020 07:42:10: 37000000 INFO @ Thu, 16 Apr 2020 07:42:10: 33000000 INFO @ Thu, 16 Apr 2020 07:42:11: 33000000 INFO @ Thu, 16 Apr 2020 07:42:16: 34000000 INFO @ Thu, 16 Apr 2020 07:42:16: 38000000 INFO @ Thu, 16 Apr 2020 07:42:17: 34000000 INFO @ Thu, 16 Apr 2020 07:42:23: 35000000 INFO @ Thu, 16 Apr 2020 07:42:23: 39000000 INFO @ Thu, 16 Apr 2020 07:42:23: 35000000 INFO @ Thu, 16 Apr 2020 07:42:29: 36000000 INFO @ Thu, 16 Apr 2020 07:42:29: 40000000 INFO @ Thu, 16 Apr 2020 07:42:30: 36000000 INFO @ Thu, 16 Apr 2020 07:42:36: 37000000 INFO @ Thu, 16 Apr 2020 07:42:36: 41000000 INFO @ Thu, 16 Apr 2020 07:42:36: 37000000 INFO @ Thu, 16 Apr 2020 07:42:36: #1 tag size is determined as 101 bps INFO @ Thu, 16 Apr 2020 07:42:36: #1 tag size = 101 INFO @ Thu, 16 Apr 2020 07:42:36: #1 total tags in treatment: 19305527 INFO @ Thu, 16 Apr 2020 07:42:36: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 07:42:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 07:42:37: #1 tags after filtering in treatment: 17727508 INFO @ Thu, 16 Apr 2020 07:42:37: #1 Redundant rate of treatment: 0.08 INFO @ Thu, 16 Apr 2020 07:42:37: #1 finished! INFO @ Thu, 16 Apr 2020 07:42:37: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 07:42:37: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 07:42:38: #2 number of paired peaks: 844 WARNING @ Thu, 16 Apr 2020 07:42:38: Fewer paired peaks (844) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 844 pairs to build model! INFO @ Thu, 16 Apr 2020 07:42:38: start model_add_line... INFO @ Thu, 16 Apr 2020 07:42:38: start X-correlation... INFO @ Thu, 16 Apr 2020 07:42:38: end of X-cor INFO @ Thu, 16 Apr 2020 07:42:38: #2 finished! INFO @ Thu, 16 Apr 2020 07:42:38: #2 predicted fragment length is 174 bps INFO @ Thu, 16 Apr 2020 07:42:38: #2 alternative fragment length(s) may be 174 bps INFO @ Thu, 16 Apr 2020 07:42:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.05_model.r WARNING @ Thu, 16 Apr 2020 07:42:38: #2 Since the d (174) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Thu, 16 Apr 2020 07:42:38: #2 You may need to consider one of the other alternative d(s): 174 WARNING @ Thu, 16 Apr 2020 07:42:38: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Thu, 16 Apr 2020 07:42:38: #3 Call peaks... INFO @ Thu, 16 Apr 2020 07:42:38: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 16 Apr 2020 07:42:42: 38000000 INFO @ Thu, 16 Apr 2020 07:42:43: 38000000 INFO @ Thu, 16 Apr 2020 07:42:49: 39000000 INFO @ Thu, 16 Apr 2020 07:42:49: 39000000 INFO @ Thu, 16 Apr 2020 07:42:55: 40000000 INFO @ Thu, 16 Apr 2020 07:42:56: 40000000 INFO @ Thu, 16 Apr 2020 07:43:01: 41000000 INFO @ Thu, 16 Apr 2020 07:43:02: #1 tag size is determined as 101 bps INFO @ Thu, 16 Apr 2020 07:43:02: #1 tag size = 101 INFO @ Thu, 16 Apr 2020 07:43:02: #1 total tags in treatment: 19305527 INFO @ Thu, 16 Apr 2020 07:43:02: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 07:43:02: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 07:43:02: 41000000 INFO @ Thu, 16 Apr 2020 07:43:02: #1 tags after filtering in treatment: 17727508 INFO @ Thu, 16 Apr 2020 07:43:02: #1 Redundant rate of treatment: 0.08 INFO @ Thu, 16 Apr 2020 07:43:02: #1 finished! INFO @ Thu, 16 Apr 2020 07:43:02: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 07:43:02: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 07:43:03: #1 tag size is determined as 101 bps INFO @ Thu, 16 Apr 2020 07:43:03: #1 tag size = 101 INFO @ Thu, 16 Apr 2020 07:43:03: #1 total tags in treatment: 19305527 INFO @ Thu, 16 Apr 2020 07:43:03: #1 user defined the maximum tags... INFO @ Thu, 16 Apr 2020 07:43:03: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Thu, 16 Apr 2020 07:43:03: #1 tags after filtering in treatment: 17727508 INFO @ Thu, 16 Apr 2020 07:43:03: #1 Redundant rate of treatment: 0.08 INFO @ Thu, 16 Apr 2020 07:43:03: #1 finished! INFO @ Thu, 16 Apr 2020 07:43:03: #2 Build Peak Model... INFO @ Thu, 16 Apr 2020 07:43:03: #2 looking for paired plus/minus strand peaks... INFO @ Thu, 16 Apr 2020 07:43:03: #2 number of paired peaks: 844 WARNING @ Thu, 16 Apr 2020 07:43:03: Fewer paired peaks (844) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 844 pairs to build model! INFO @ Thu, 16 Apr 2020 07:43:03: start model_add_line... INFO @ Thu, 16 Apr 2020 07:43:04: start X-correlation... INFO @ Thu, 16 Apr 2020 07:43:04: end of X-cor INFO @ Thu, 16 Apr 2020 07:43:04: #2 finished! INFO @ Thu, 16 Apr 2020 07:43:04: #2 predicted fragment length is 174 bps INFO @ Thu, 16 Apr 2020 07:43:04: #2 alternative fragment length(s) may be 174 bps INFO @ Thu, 16 Apr 2020 07:43:04: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.10_model.r WARNING @ Thu, 16 Apr 2020 07:43:04: #2 Since the d (174) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Thu, 16 Apr 2020 07:43:04: #2 You may need to consider one of the other alternative d(s): 174 WARNING @ Thu, 16 Apr 2020 07:43:04: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Thu, 16 Apr 2020 07:43:04: #3 Call peaks... INFO @ Thu, 16 Apr 2020 07:43:04: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 16 Apr 2020 07:43:04: #2 number of paired peaks: 844 WARNING @ Thu, 16 Apr 2020 07:43:04: Fewer paired peaks (844) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 844 pairs to build model! INFO @ Thu, 16 Apr 2020 07:43:04: start model_add_line... INFO @ Thu, 16 Apr 2020 07:43:04: start X-correlation... INFO @ Thu, 16 Apr 2020 07:43:04: end of X-cor INFO @ Thu, 16 Apr 2020 07:43:04: #2 finished! INFO @ Thu, 16 Apr 2020 07:43:04: #2 predicted fragment length is 174 bps INFO @ Thu, 16 Apr 2020 07:43:04: #2 alternative fragment length(s) may be 174 bps INFO @ Thu, 16 Apr 2020 07:43:04: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.20_model.r WARNING @ Thu, 16 Apr 2020 07:43:04: #2 Since the d (174) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Thu, 16 Apr 2020 07:43:04: #2 You may need to consider one of the other alternative d(s): 174 WARNING @ Thu, 16 Apr 2020 07:43:04: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Thu, 16 Apr 2020 07:43:04: #3 Call peaks... INFO @ Thu, 16 Apr 2020 07:43:04: #3 Pre-compute pvalue-qvalue table... INFO @ Thu, 16 Apr 2020 07:43:14: #3 Call peaks for each chromosome... INFO @ Thu, 16 Apr 2020 07:43:30: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.05_peaks.xls INFO @ Thu, 16 Apr 2020 07:43:30: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.05_peaks.narrowPeak INFO @ Thu, 16 Apr 2020 07:43:30: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.05_summits.bed INFO @ Thu, 16 Apr 2020 07:43:30: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (3192 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Thu, 16 Apr 2020 07:43:39: #3 Call peaks for each chromosome... INFO @ Thu, 16 Apr 2020 07:43:41: #3 Call peaks for each chromosome... INFO @ Thu, 16 Apr 2020 07:43:55: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.10_peaks.xls INFO @ Thu, 16 Apr 2020 07:43:56: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.10_peaks.narrowPeak INFO @ Thu, 16 Apr 2020 07:43:56: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.10_summits.bed INFO @ Thu, 16 Apr 2020 07:43:56: Done! pass1 - making usageList (15 chroms): 1 millis pass2 - checking and writing primary data (2139 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Thu, 16 Apr 2020 07:43:57: #4 Write output xls file... /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.20_peaks.xls INFO @ Thu, 16 Apr 2020 07:43:57: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.20_peaks.narrowPeak INFO @ Thu, 16 Apr 2020 07:43:57: #4 Write summits bed file... /home/okishinya/chipatlas/results/dm3/SRX6845076/SRX6845076.20_summits.bed INFO @ Thu, 16 Apr 2020 07:43:57: Done! pass1 - making usageList (15 chroms): 0 millis pass2 - checking and writing primary data (1250 records, 4 fields): 3 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。